EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000011069 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 21083 bases
Position: chrGeneScaffold_3948:2848-23930
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000010147	ResIII	PF04851.15	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000011111	CHD3-201	5586	-	ENSOPRP00000010147	1861 (aa)	-	UPI0001776334

Gene Model

Click here to download ENSOPRG00000011069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000011069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000011069	CHD3	76	86.111	ENSOPRG00000003477	-	74	86.111
ENSOPRG00000011069	CHD3	83	67.461	ENSOPRG00000004304	CHD5	82	67.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000011069	CHD3	100	96.955	ENSG00000170004	CHD3	99	98.099	Homo_sapiens
ENSOPRG00000011069	CHD3	84	80.102	ENSAPOG00000005614	chd3	94	80.102	Acanthochromis_polyacanthus
ENSOPRG00000011069	CHD3	73	94.868	ENSAMEG00000003025	-	100	94.868	Ailuropoda_melanoleuca
ENSOPRG00000011069	CHD3	86	82.353	ENSACIG00000019671	chd3	99	82.353	Amphilophus_citrinellus
ENSOPRG00000011069	CHD3	85	81.122	ENSAOCG00000023784	chd3	97	81.122	Amphiprion_ocellaris
ENSOPRG00000011069	CHD3	77	78.649	ENSAPEG00000006341	chd3	92	74.497	Amphiprion_percula
ENSOPRG00000011069	CHD3	99	72.966	ENSATEG00000000848	chd3	95	81.771	Anabas_testudineus
ENSOPRG00000011069	CHD3	100	84.963	ENSACAG00000004276	CHD3	91	84.787	Anolis_carolinensis
ENSOPRG00000011069	CHD3	100	96.848	ENSANAG00000034323	CHD3	99	96.848	Aotus_nancymaae
ENSOPRG00000011069	CHD3	94	77.743	ENSACLG00000009222	chd3	97	74.161	Astatotilapia_calliptera
ENSOPRG00000011069	CHD3	100	96.211	ENSBTAG00000014377	CHD3	94	95.847	Bos_taurus
ENSOPRG00000011069	CHD3	100	96.795	ENSCJAG00000014766	CHD3	94	96.795	Callithrix_jacchus
ENSOPRG00000011069	CHD3	100	96.261	ENSCAFG00000016859	CHD3	94	96.261	Canis_familiaris
ENSOPRG00000011069	CHD3	100	96.261	ENSCAFG00020007422	CHD3	100	96.179	Canis_lupus_dingo
ENSOPRG00000011069	CHD3	100	96.530	ENSCHIG00000016737	CHD3	95	96.530	Capra_hircus
ENSOPRG00000011069	CHD3	100	96.903	ENSTSYG00000035658	CHD3	99	94.336	Carlito_syrichta
ENSOPRG00000011069	CHD3	100	93.540	ENSCAPG00000014864	CHD3	93	93.540	Cavia_aperea
ENSOPRG00000011069	CHD3	100	96.209	ENSCPOG00000022653	CHD3	93	96.209	Cavia_porcellus
ENSOPRG00000011069	CHD3	100	96.688	ENSCCAG00000034792	CHD3	94	96.688	Cebus_capucinus
ENSOPRG00000011069	CHD3	100	96.741	ENSCATG00000041717	CHD3	94	96.741	Cercocebus_atys
ENSOPRG00000011069	CHD3	100	96.423	ENSCLAG00000010523	CHD3	95	96.423	Chinchilla_lanigera
ENSOPRG00000011069	CHD3	100	96.581	ENSCSAG00000011122	CHD3	95	96.581	Chlorocebus_sabaeus
ENSOPRG00000011069	CHD3	91	86.060	ENSCPBG00000011966	CHD3	99	86.187	Chrysemys_picta_bellii
ENSOPRG00000011069	CHD3	100	96.688	ENSCANG00000037641	CHD3	99	93.686	Colobus_angolensis_palliatus
ENSOPRG00000011069	CHD3	100	95.784	ENSCGRG00001011306	Chd3	95	95.784	Cricetulus_griseus_chok1gshd
ENSOPRG00000011069	CHD3	94	97.619	ENSCGRG00000007878	Chd3	94	97.619	Cricetulus_griseus_crigri
ENSOPRG00000011069	CHD3	92	77.741	ENSCSEG00000004489	chd3	95	77.741	Cynoglossus_semilaevis
ENSOPRG00000011069	CHD3	89	82.213	ENSCVAG00000007293	chd3	97	74.443	Cyprinodon_variegatus
ENSOPRG00000011069	CHD3	99	75.946	ENSDARG00000021405	chd3	99	73.529	Danio_rerio
ENSOPRG00000011069	CHD3	100	80.925	ENSDNOG00000047846	CHD3	86	89.889	Dasypus_novemcinctus
ENSOPRG00000011069	CHD3	100	95.989	ENSDORG00000010713	Chd3	95	95.989	Dipodomys_ordii
ENSOPRG00000011069	CHD3	98	91.858	ENSETEG00000017733	CHD3	95	91.858	Echinops_telfairi
ENSOPRG00000011069	CHD3	80	69.697	ENSEBUG00000008310	chd3	99	70.147	Eptatretus_burgeri
ENSOPRG00000011069	CHD3	98	96.454	ENSEASG00005019360	CHD3	100	96.454	Equus_asinus_asinus
ENSOPRG00000011069	CHD3	98	96.508	ENSECAG00000010051	CHD3	100	96.508	Equus_caballus
ENSOPRG00000011069	CHD3	92	88.270	ENSEEUG00000015205	CHD3	88	88.270	Erinaceus_europaeus
ENSOPRG00000011069	CHD3	82	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSOPRG00000011069	CHD3	100	96.154	ENSFCAG00000009629	CHD3	91	96.154	Felis_catus
ENSOPRG00000011069	CHD3	100	96.421	ENSFDAG00000008220	CHD3	95	96.421	Fukomys_damarensis
ENSOPRG00000011069	CHD3	90	79.289	ENSGMOG00000013599	chd3	88	79.898	Gadus_morhua
ENSOPRG00000011069	CHD3	59	76.007	ENSGAFG00000004055	chd3	95	77.281	Gambusia_affinis
ENSOPRG00000011069	CHD3	99	71.451	ENSGACG00000019275	chd3	96	71.714	Gasterosteus_aculeatus
ENSOPRG00000011069	CHD3	80	84.980	ENSGAGG00000013164	CHD3	94	90.288	Gopherus_agassizii
ENSOPRG00000011069	CHD3	100	96.848	ENSGGOG00000013496	CHD3	99	93.794	Gorilla_gorilla
ENSOPRG00000011069	CHD3	100	96.263	ENSHGLG00000012017	CHD3	94	96.263	Heterocephalus_glaber_female
ENSOPRG00000011069	CHD3	89	89.741	ENSHGLG00100013902	CHD3	94	88.737	Heterocephalus_glaber_male
ENSOPRG00000011069	CHD3	96	73.572	ENSHCOG00000010170	chd3	92	74.212	Hippocampus_comes
ENSOPRG00000011069	CHD3	89	79.716	ENSIPUG00000003271	chd3	94	79.071	Ictalurus_punctatus
ENSOPRG00000011069	CHD3	100	96.526	ENSSTOG00000025907	CHD3	95	96.526	Ictidomys_tridecemlineatus
ENSOPRG00000011069	CHD3	100	95.355	ENSJJAG00000017633	Chd3	95	95.355	Jaculus_jaculus
ENSOPRG00000011069	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	74.267	Kryptolebias_marmoratus
ENSOPRG00000011069	CHD3	96	70.996	ENSLBEG00000028485	chd3	90	71.067	Labrus_bergylta
ENSOPRG00000011069	CHD3	98	74.804	ENSLACG00000008031	CHD3	94	75.078	Latimeria_chalumnae
ENSOPRG00000011069	CHD3	100	77.119	ENSLOCG00000013965	chd3	92	77.691	Lepisosteus_oculatus
ENSOPRG00000011069	CHD3	91	96.536	ENSLAFG00000000572	CHD3	95	92.514	Loxodonta_africana
ENSOPRG00000011069	CHD3	100	96.688	ENSMFAG00000020113	CHD3	99	94.863	Macaca_fascicularis
ENSOPRG00000011069	CHD3	100	94.228	ENSMMUG00000022221	CHD3	94	94.074	Macaca_mulatta
ENSOPRG00000011069	CHD3	100	96.688	ENSMNEG00000001728	CHD3	99	96.066	Macaca_nemestrina
ENSOPRG00000011069	CHD3	100	96.741	ENSMLEG00000032249	CHD3	94	96.741	Mandrillus_leucophaeus
ENSOPRG00000011069	CHD3	90	75.191	ENSMAMG00000000564	chd3	95	81.481	Mastacembelus_armatus
ENSOPRG00000011069	CHD3	100	95.304	ENSMAUG00000013873	Chd3	99	92.728	Mesocricetus_auratus
ENSOPRG00000011069	CHD3	100	96.690	ENSMICG00000008741	CHD3	94	93.770	Microcebus_murinus
ENSOPRG00000011069	CHD3	100	95.571	ENSMOCG00000004848	Chd3	95	95.571	Microtus_ochrogaster
ENSOPRG00000011069	CHD3	98	74.171	ENSMMOG00000012699	chd3	97	74.253	Mola_mola
ENSOPRG00000011069	CHD3	98	91.703	ENSMODG00000007509	CHD3	100	91.703	Monodelphis_domestica
ENSOPRG00000011069	CHD3	100	95.573	MGP_CAROLIEiJ_G0016564	Chd3	95	94.326	Mus_caroli
ENSOPRG00000011069	CHD3	100	95.522	ENSMUSG00000018474	Chd3	95	94.275	Mus_musculus
ENSOPRG00000011069	CHD3	100	95.789	MGP_PahariEiJ_G0017695	Chd3	95	94.490	Mus_pahari
ENSOPRG00000011069	CHD3	100	95.522	MGP_SPRETEiJ_G0017400	Chd3	95	94.275	Mus_spretus
ENSOPRG00000011069	CHD3	91	95.855	ENSMPUG00000008861	CHD3	100	95.855	Mustela_putorius_furo
ENSOPRG00000011069	CHD3	100	96.158	ENSMLUG00000014643	-	94	96.158	Myotis_lucifugus
ENSOPRG00000011069	CHD3	100	96.103	ENSNGAG00000000773	Chd3	93	96.103	Nannospalax_galili
ENSOPRG00000011069	CHD3	91	74.677	ENSNBRG00000000636	chd3	98	74.550	Neolamprologus_brichardi
ENSOPRG00000011069	CHD3	99	93.215	ENSNLEG00000009770	CHD3	95	94.105	Nomascus_leucogenys
ENSOPRG00000011069	CHD3	87	90.074	ENSMEUG00000005852	CHD3	84	90.074	Notamacropus_eugenii
ENSOPRG00000011069	CHD3	100	96.316	ENSODEG00000017785	CHD3	94	96.316	Octodon_degus
ENSOPRG00000011069	CHD3	77	78.738	ENSONIG00000009292	chd3	96	75.979	Oreochromis_niloticus
ENSOPRG00000011069	CHD3	100	92.079	ENSOCUG00000029299	CHD3	96	91.977	Oryctolagus_cuniculus
ENSOPRG00000011069	CHD3	85	71.633	ENSORLG00000007107	chd3	91	71.943	Oryzias_latipes
ENSOPRG00000011069	CHD3	57	74.278	ENSORLG00020008387	chd3	90	75.210	Oryzias_latipes_hni
ENSOPRG00000011069	CHD3	74	79.557	ENSOMEG00000013691	chd3	99	76.982	Oryzias_melastigma
ENSOPRG00000011069	CHD3	100	96.156	ENSOGAG00000003216	CHD3	95	96.156	Otolemur_garnettii
ENSOPRG00000011069	CHD3	100	93.657	ENSOARG00000017855	CHD3	94	93.870	Ovis_aries
ENSOPRG00000011069	CHD3	100	94.477	ENSPPAG00000032886	CHD3	99	93.168	Pan_paniscus
ENSOPRG00000011069	CHD3	100	96.368	ENSPPRG00000000626	CHD3	94	96.368	Panthera_pardus
ENSOPRG00000011069	CHD3	100	97.009	ENSPTRG00000008714	CHD3	99	94.010	Pan_troglodytes
ENSOPRG00000011069	CHD3	100	96.741	ENSPANG00000023938	CHD3	99	94.918	Papio_anubis
ENSOPRG00000011069	CHD3	97	78.183	ENSPKIG00000006305	chd3	96	78.183	Paramormyrops_kingsleyae
ENSOPRG00000011069	CHD3	58	89.507	ENSPSIG00000010177	CHD3	98	89.781	Pelodiscus_sinensis
ENSOPRG00000011069	CHD3	100	95.144	ENSPEMG00000014262	Chd3	95	95.197	Peromyscus_maniculatus_bairdii
ENSOPRG00000011069	CHD3	100	91.827	ENSPCIG00000005442	CHD3	95	96.341	Phascolarctos_cinereus
ENSOPRG00000011069	CHD3	98	73.396	ENSPFOG00000012464	chd3	88	74.829	Poecilia_formosa
ENSOPRG00000011069	CHD3	90	83.534	ENSPLAG00000002887	chd3	92	80.460	Poecilia_latipinna
ENSOPRG00000011069	CHD3	53	80.186	ENSPMEG00000016725	chd3	87	74.673	Poecilia_mexicana
ENSOPRG00000011069	CHD3	93	79.068	ENSPREG00000011044	chd3	95	78.884	Poecilia_reticulata
ENSOPRG00000011069	CHD3	100	94.177	ENSPPYG00000007940	CHD3	95	94.177	Pongo_abelii
ENSOPRG00000011069	CHD3	96	97.059	ENSPCAG00000004350	CHD3	92	96.833	Procavia_capensis
ENSOPRG00000011069	CHD3	100	96.583	ENSPCOG00000020952	CHD3	94	96.531	Propithecus_coquereli
ENSOPRG00000011069	CHD3	86	98.640	ENSPVAG00000016344	CHD3	82	98.640	Pteropus_vampyrus
ENSOPRG00000011069	CHD3	99	76.888	ENSPNAG00000020393	chd3	98	80.714	Pygocentrus_nattereri
ENSOPRG00000011069	CHD3	98	94.553	ENSRNOG00000009722	Chd3	100	94.608	Rattus_norvegicus
ENSOPRG00000011069	CHD3	100	93.463	ENSRBIG00000033562	CHD3	99	93.046	Rhinopithecus_bieti
ENSOPRG00000011069	CHD3	100	95.353	ENSRROG00000029554	CHD3	99	94.513	Rhinopithecus_roxellana
ENSOPRG00000011069	CHD3	100	96.902	ENSSBOG00000020719	CHD3	99	96.230	Saimiri_boliviensis_boliviensis
ENSOPRG00000011069	CHD3	100	91.774	ENSSHAG00000014412	CHD3	96	91.827	Sarcophilus_harrisii
ENSOPRG00000011069	CHD3	92	78.699	ENSSFOG00015023123	chd3	98	73.579	Scleropages_formosus
ENSOPRG00000011069	CHD3	98	73.347	ENSSMAG00000006451	chd3	99	74.765	Scophthalmus_maximus
ENSOPRG00000011069	CHD3	55	73.867	ENSSDUG00000005792	chd3	91	74.327	Seriola_dumerili
ENSOPRG00000011069	CHD3	85	79.897	ENSSPAG00000013694	chd3	99	79.239	Stegastes_partitus
ENSOPRG00000011069	CHD3	100	96.211	ENSSSCG00000021363	CHD3	100	96.129	Sus_scrofa
ENSOPRG00000011069	CHD3	76	77.235	ENSTRUG00000014990	chd3	86	77.510	Takifugu_rubripes
ENSOPRG00000011069	CHD3	99	73.186	ENSTNIG00000012998	chd3	95	73.477	Tetraodon_nigroviridis
ENSOPRG00000011069	CHD3	67	97.129	ENSTBEG00000011454	-	71	97.129	Tupaia_belangeri
ENSOPRG00000011069	CHD3	99	97.817	ENSTTRG00000010295	CHD3	92	97.817	Tursiops_truncatus
ENSOPRG00000011069	CHD3	98	95.101	ENSUAMG00000005475	CHD3	99	95.101	Ursus_americanus
ENSOPRG00000011069	CHD3	59	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSOPRG00000011069	CHD3	100	96.261	ENSVVUG00000028011	CHD3	98	96.261	Vulpes_vulpes
ENSOPRG00000011069	CHD3	100	73.789	ENSXETG00000012991	chd3	92	73.879	Xenopus_tropicalis
ENSOPRG00000011069	CHD3	51	81.736	ENSXCOG00000000809	chd3	89	81.962	Xiphophorus_couchianus
ENSOPRG00000011069	CHD3	84	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus