EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000011846 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 23927 bases
Position: chrGeneScaffold_3866:221685-245611
Accession: 15797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000010811	PABP	PF00658.18	1.2e-28	1	1
ENSOPRP00000010811	RRM_5	PF13893.6	2.1e-11	1	1
ENSOPRP00000010811	RRM_1	PF00076.22	4.3e-89	1	4
ENSOPRP00000010811	RRM_1	PF00076.22	4.3e-89	2	4
ENSOPRP00000010811	RRM_1	PF00076.22	4.3e-89	3	4
ENSOPRP00000010811	RRM_1	PF00076.22	4.3e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000011846	PABPC1L-201	1848	-	ENSOPRP00000010811	615 (aa)	-	UPI00017785C7

Gene Model

Click here to download ENSOPRG00000011846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000011846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000011846	PABPC1L	58	36.585	ENSOPRG00000010808	SF3B4	54	36.585
ENSOPRG00000011846	PABPC1L	60	40.278	ENSOPRG00000015300	ELAVL4	70	40.278
ENSOPRG00000011846	PABPC1L	60	33.735	ENSOPRG00000012874	ELAVL2	85	33.735
ENSOPRG00000011846	PABPC1L	99	68.910	ENSOPRG00000009667	PABPC3	98	68.910
ENSOPRG00000011846	PABPC1L	81	84.127	ENSOPRG00000011984	PABPC4	81	84.127
ENSOPRG00000011846	PABPC1L	59	58.500	ENSOPRG00000000856	PABPC5	94	58.454
ENSOPRG00000011846	PABPC1L	54	36.047	ENSOPRG00000011502	CELF2	57	36.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000011846	PABPC1L	100	86.667	ENSG00000101104	PABPC1L	99	92.284	Homo_sapiens
ENSOPRG00000011846	PABPC1L	99	64.960	ENSAPOG00000010842	pabpc1l	99	65.120	Acanthochromis_polyacanthus
ENSOPRG00000011846	PABPC1L	99	75.975	ENSAMEG00000004099	PABPC1L	100	76.791	Ailuropoda_melanoleuca
ENSOPRG00000011846	PABPC1L	99	70.657	ENSACIG00000021004	-	99	70.657	Amphilophus_citrinellus
ENSOPRG00000011846	PABPC1L	99	64.976	ENSAOCG00000006167	-	99	65.135	Amphiprion_ocellaris
ENSOPRG00000011846	PABPC1L	99	66.397	ENSAPEG00000010558	-	97	78.218	Amphiprion_percula
ENSOPRG00000011846	PABPC1L	99	68.013	ENSATEG00000007428	pabpc1l	99	68.174	Anabas_testudineus
ENSOPRG00000011846	PABPC1L	97	73.083	ENSAPLG00000008415	PABPC1L	99	73.096	Anas_platyrhynchos
ENSOPRG00000011846	PABPC1L	99	72.392	ENSACAG00000011841	PABPC1L	98	72.392	Anolis_carolinensis
ENSOPRG00000011846	PABPC1L	100	85.528	ENSANAG00000026826	PABPC1L	100	85.528	Aotus_nancymaae
ENSOPRG00000011846	PABPC1L	99	67.093	ENSACLG00000024791	pabpc1l	99	67.093	Astatotilapia_calliptera
ENSOPRG00000011846	PABPC1L	99	68.320	ENSAMXG00000013552	pabpc1l	99	68.320	Astyanax_mexicanus
ENSOPRG00000011846	PABPC1L	56	95.833	ENSBTAG00000055300	-	100	95.833	Bos_taurus
ENSOPRG00000011846	PABPC1L	67	73.611	ENSBTAG00000016849	PABPC1L	87	73.611	Bos_taurus
ENSOPRG00000011846	PABPC1L	100	86.179	ENSCJAG00000017628	PABPC1L	100	86.179	Callithrix_jacchus
ENSOPRG00000011846	PABPC1L	60	75.862	ENSCJAG00000038506	-	100	75.862	Callithrix_jacchus
ENSOPRG00000011846	PABPC1L	99	73.242	ENSCAFG00000009573	PABPC1L	100	73.242	Canis_familiaris
ENSOPRG00000011846	PABPC1L	99	85.597	ENSCAFG00020013828	PABPC1L	99	85.597	Canis_lupus_dingo
ENSOPRG00000011846	PABPC1L	97	83.639	ENSCHIG00000025759	PABPC1L	91	83.639	Capra_hircus
ENSOPRG00000011846	PABPC1L	100	83.252	ENSTSYG00000006645	PABPC1L	100	83.252	Carlito_syrichta
ENSOPRG00000011846	PABPC1L	99	77.636	ENSCAPG00000014519	PABPC1L	100	77.636	Cavia_aperea
ENSOPRG00000011846	PABPC1L	100	81.159	ENSCPOG00000013633	PABPC1L	100	81.159	Cavia_porcellus
ENSOPRG00000011846	PABPC1L	100	85.366	ENSCCAG00000023338	PABPC1L	100	85.366	Cebus_capucinus
ENSOPRG00000011846	PABPC1L	100	86.992	ENSCATG00000034065	PABPC1L	100	86.992	Cercocebus_atys
ENSOPRG00000011846	PABPC1L	100	80.193	ENSCLAG00000005298	PABPC1L	100	81.320	Chinchilla_lanigera
ENSOPRG00000011846	PABPC1L	100	86.992	ENSCSAG00000014242	PABPC1L	100	86.992	Chlorocebus_sabaeus
ENSOPRG00000011846	PABPC1L	72	81.222	ENSCPBG00000017755	-	99	81.222	Chrysemys_picta_bellii
ENSOPRG00000011846	PABPC1L	53	79.545	ENSCPBG00000007810	-	81	79.545	Chrysemys_picta_bellii
ENSOPRG00000011846	PABPC1L	97	48.785	ENSCING00000002796	-	97	50.505	Ciona_intestinalis
ENSOPRG00000011846	PABPC1L	97	59.612	ENSCSAVG00000004246	-	97	59.612	Ciona_savignyi
ENSOPRG00000011846	PABPC1L	97	56.572	ENSCSAVG00000003102	-	100	81.507	Ciona_savignyi
ENSOPRG00000011846	PABPC1L	100	82.212	ENSCANG00000037530	PABPC1L	100	82.212	Colobus_angolensis_palliatus
ENSOPRG00000011846	PABPC1L	99	75.689	ENSCGRG00001021938	Pabpc1l	99	75.689	Cricetulus_griseus_chok1gshd
ENSOPRG00000011846	PABPC1L	99	75.689	ENSCGRG00000007946	Pabpc1l	99	75.689	Cricetulus_griseus_crigri
ENSOPRG00000011846	PABPC1L	99	63.770	ENSCSEG00000021295	pabpc1l	99	63.770	Cynoglossus_semilaevis
ENSOPRG00000011846	PABPC1L	99	68.071	ENSCVAG00000015943	-	86	84.733	Cyprinodon_variegatus
ENSOPRG00000011846	PABPC1L	99	69.021	ENSDARG00000002597	pabpc1l	88	86.923	Danio_rerio
ENSOPRG00000011846	PABPC1L	99	85.318	ENSDNOG00000048450	PABPC1L	99	85.318	Dasypus_novemcinctus
ENSOPRG00000011846	PABPC1L	100	84.715	ENSDORG00000001067	Pabpc1l	100	84.715	Dipodomys_ordii
ENSOPRG00000011846	PABPC1L	96	89.431	ENSETEG00000009969	PABPC1L	73	89.431	Echinops_telfairi
ENSOPRG00000011846	PABPC1L	58	74.519	ENSEASG00005023407	-	83	74.519	Equus_asinus_asinus
ENSOPRG00000011846	PABPC1L	56	95.238	ENSEASG00005023408	-	100	95.238	Equus_asinus_asinus
ENSOPRG00000011846	PABPC1L	67	83.843	ENSECAG00000040139	-	81	83.843	Equus_caballus
ENSOPRG00000011846	PABPC1L	100	80.976	ENSEEUG00000005978	PABPC1L	100	80.976	Erinaceus_europaeus
ENSOPRG00000011846	PABPC1L	99	68.421	ENSELUG00000001811	pabpc1l	99	68.421	Esox_lucius
ENSOPRG00000011846	PABPC1L	99	84.943	ENSFCAG00000011692	PABPC1L	99	84.943	Felis_catus
ENSOPRG00000011846	PABPC1L	80	77.328	ENSFALG00000005372	PABPC1L	83	77.328	Ficedula_albicollis
ENSOPRG00000011846	PABPC1L	100	79.708	ENSFDAG00000008291	PABPC1L	100	79.708	Fukomys_damarensis
ENSOPRG00000011846	PABPC1L	99	67.967	ENSFHEG00000003398	pabpc1l	99	67.967	Fundulus_heteroclitus
ENSOPRG00000011846	PABPC1L	99	68.608	ENSGMOG00000004437	pabpc1l	98	68.608	Gadus_morhua
ENSOPRG00000011846	PABPC1L	98	68.836	ENSGALG00000004123	PABPC1L	99	82.974	Gallus_gallus
ENSOPRG00000011846	PABPC1L	99	64.012	ENSGAFG00000021057	pabpc1l	99	64.012	Gambusia_affinis
ENSOPRG00000011846	PABPC1L	99	66.827	ENSGACG00000002792	pabpc1l	99	66.827	Gasterosteus_aculeatus
ENSOPRG00000011846	PABPC1L	99	74.759	ENSGAGG00000000589	PABPC1L	98	74.759	Gopherus_agassizii
ENSOPRG00000011846	PABPC1L	100	86.667	ENSGGOG00000004584	PABPC1L	100	86.667	Gorilla_gorilla
ENSOPRG00000011846	PABPC1L	99	66.933	ENSHBUG00000006134	pabpc1l	99	66.933	Haplochromis_burtoni
ENSOPRG00000011846	PABPC1L	100	81.159	ENSHGLG00000008434	PABPC1L	100	81.159	Heterocephalus_glaber_female
ENSOPRG00000011846	PABPC1L	60	80.899	ENSHGLG00100019506	-	100	80.899	Heterocephalus_glaber_male
ENSOPRG00000011846	PABPC1L	100	81.159	ENSHGLG00100012151	PABPC1L	100	81.159	Heterocephalus_glaber_male
ENSOPRG00000011846	PABPC1L	99	66.069	ENSHCOG00000009270	pabpc1l	99	66.069	Hippocampus_comes
ENSOPRG00000011846	PABPC1L	59	61.047	ENSIPUG00000006760	-	88	61.047	Ictalurus_punctatus
ENSOPRG00000011846	PABPC1L	60	61.628	ENSIPUG00000006780	-	85	61.628	Ictalurus_punctatus
ENSOPRG00000011846	PABPC1L	99	69.600	ENSIPUG00000012602	pabpc1l	99	69.600	Ictalurus_punctatus
ENSOPRG00000011846	PABPC1L	100	86.016	ENSSTOG00000003739	PABPC1L	100	86.016	Ictidomys_tridecemlineatus
ENSOPRG00000011846	PABPC1L	99	66.788	ENSJJAG00000022406	Pabpc1l	99	64.182	Jaculus_jaculus
ENSOPRG00000011846	PABPC1L	99	68.344	ENSKMAG00000016847	pabpc1l	99	68.344	Kryptolebias_marmoratus
ENSOPRG00000011846	PABPC1L	99	66.561	ENSLBEG00000010084	pabpc1l	99	66.561	Labrus_bergylta
ENSOPRG00000011846	PABPC1L	99	68.362	ENSLACG00000005762	PABPC1L	99	69.669	Latimeria_chalumnae
ENSOPRG00000011846	PABPC1L	99	70.418	ENSLOCG00000007519	pabpc1l	98	70.418	Lepisosteus_oculatus
ENSOPRG00000011846	PABPC1L	99	81.891	ENSLAFG00000003553	PABPC1L	100	81.891	Loxodonta_africana
ENSOPRG00000011846	PABPC1L	100	87.317	ENSMFAG00000040365	PABPC1L	100	87.317	Macaca_fascicularis
ENSOPRG00000011846	PABPC1L	100	84.814	ENSMNEG00000032298	PABPC1L	100	84.814	Macaca_nemestrina
ENSOPRG00000011846	PABPC1L	100	86.992	ENSMLEG00000043139	PABPC1L	100	86.992	Mandrillus_leucophaeus
ENSOPRG00000011846	PABPC1L	97	66.557	ENSMAMG00000011854	pabpc1l	97	66.557	Mastacembelus_armatus
ENSOPRG00000011846	PABPC1L	99	67.093	ENSMZEG00005023713	pabpc1l	99	67.093	Maylandia_zebra
ENSOPRG00000011846	PABPC1L	99	72.320	ENSMGAG00000003674	PABPC1L	98	72.320	Meleagris_gallopavo
ENSOPRG00000011846	PABPC1L	99	73.744	ENSMOCG00000013186	Pabpc1l	99	73.744	Microtus_ochrogaster
ENSOPRG00000011846	PABPC1L	99	67.799	ENSMMOG00000020574	-	90	85.385	Mola_mola
ENSOPRG00000011846	PABPC1L	97	76.539	ENSMODG00000016198	PABPC1L	99	76.539	Monodelphis_domestica
ENSOPRG00000011846	PABPC1L	97	65.260	ENSMALG00000021622	pabpc1l	100	65.260	Monopterus_albus
ENSOPRG00000011846	PABPC1L	99	75.204	MGP_CAROLIEiJ_G0024627	Pabpc1l	99	75.204	Mus_caroli
ENSOPRG00000011846	PABPC1L	99	75.204	ENSMUSG00000054582	Pabpc1l	99	75.204	Mus_musculus
ENSOPRG00000011846	PABPC1L	99	75.041	MGP_PahariEiJ_G0026071	Pabpc1l	99	75.041	Mus_pahari
ENSOPRG00000011846	PABPC1L	99	75.204	MGP_SPRETEiJ_G0025549	Pabpc1l	99	75.204	Mus_spretus
ENSOPRG00000011846	PABPC1L	99	83.279	ENSMPUG00000017646	PABPC1L	99	83.279	Mustela_putorius_furo
ENSOPRG00000011846	PABPC1L	98	76.935	ENSMLUG00000006324	PABPC1L	97	76.935	Myotis_lucifugus
ENSOPRG00000011846	PABPC1L	100	77.419	ENSNGAG00000010458	Pabpc1l	100	77.419	Nannospalax_galili
ENSOPRG00000011846	PABPC1L	99	72.902	ENSNBRG00000016633	pabpc1l	99	72.902	Neolamprologus_brichardi
ENSOPRG00000011846	PABPC1L	100	65.528	ENSMEUG00000007905	-	100	65.528	Notamacropus_eugenii
ENSOPRG00000011846	PABPC1L	100	73.171	ENSODEG00000015482	PABPC1L	100	73.171	Octodon_degus
ENSOPRG00000011846	PABPC1L	58	74.375	ENSODEG00000002920	-	97	74.375	Octodon_degus
ENSOPRG00000011846	PABPC1L	99	67.252	ENSONIG00000017314	pabpc1l	99	67.252	Oreochromis_niloticus
ENSOPRG00000011846	PABPC1L	89	66.365	ENSOANG00000015793	-	100	66.365	Ornithorhynchus_anatinus
ENSOPRG00000011846	PABPC1L	99	79.908	ENSOCUG00000003005	PABPC1L	100	79.908	Oryctolagus_cuniculus
ENSOPRG00000011846	PABPC1L	99	66.882	ENSORLG00000010322	pabpc1l	99	76.923	Oryzias_latipes
ENSOPRG00000011846	PABPC1L	99	66.882	ENSORLG00020021193	pabpc1l	99	76.923	Oryzias_latipes_hni
ENSOPRG00000011846	PABPC1L	99	66.186	ENSORLG00015017018	pabpc1l	99	75.641	Oryzias_latipes_hsok
ENSOPRG00000011846	PABPC1L	99	63.706	ENSOMEG00000010789	pabpc1l	99	63.706	Oryzias_melastigma
ENSOPRG00000011846	PABPC1L	99	82.692	ENSOGAG00000032999	PABPC1L	100	82.692	Otolemur_garnettii
ENSOPRG00000011846	PABPC1L	99	83.961	ENSOARG00000004578	PABPC1L	99	83.961	Ovis_aries
ENSOPRG00000011846	PABPC1L	100	86.504	ENSPPAG00000039677	PABPC1L	100	86.504	Pan_paniscus
ENSOPRG00000011846	PABPC1L	63	80.556	ENSPPRG00000019327	-	98	80.556	Panthera_pardus
ENSOPRG00000011846	PABPC1L	99	85.124	ENSPTIG00000006524	PABPC1L	99	85.124	Panthera_tigris_altaica
ENSOPRG00000011846	PABPC1L	63	91.975	ENSPTRG00000013531	PABPC1L	99	91.975	Pan_troglodytes
ENSOPRG00000011846	PABPC1L	100	86.992	ENSPANG00000018788	PABPC1L	100	86.992	Papio_anubis
ENSOPRG00000011846	PABPC1L	99	69.663	ENSPKIG00000007322	pabpc1l	99	69.663	Paramormyrops_kingsleyae
ENSOPRG00000011846	PABPC1L	53	81.679	ENSPKIG00000016810	-	93	81.679	Paramormyrops_kingsleyae
ENSOPRG00000011846	PABPC1L	68	82.734	ENSPSIG00000013289	PABPC1L	99	82.734	Pelodiscus_sinensis
ENSOPRG00000011846	PABPC1L	54	84.091	ENSPMGG00000023117	pabpc1l	92	84.091	Periophthalmus_magnuspinnatus
ENSOPRG00000011846	PABPC1L	72	70.352	ENSPMGG00000023121	-	93	70.352	Periophthalmus_magnuspinnatus
ENSOPRG00000011846	PABPC1L	98	75.497	ENSPEMG00000020671	Pabpc1l	99	75.662	Peromyscus_maniculatus_bairdii
ENSOPRG00000011846	PABPC1L	99	67.897	ENSPFOG00000013241	pabpc1l	99	67.633	Poecilia_formosa
ENSOPRG00000011846	PABPC1L	99	67.419	ENSPLAG00000017490	-	99	67.419	Poecilia_latipinna
ENSOPRG00000011846	PABPC1L	99	67.851	ENSPMEG00000007677	pabpc1l	99	67.851	Poecilia_mexicana
ENSOPRG00000011846	PABPC1L	67	76.029	ENSPREG00000015886	pabpc1l	99	76.029	Poecilia_reticulata
ENSOPRG00000011846	PABPC1L	100	86.829	ENSPPYG00000011042	PABPC1L	100	86.829	Pongo_abelii
ENSOPRG00000011846	PABPC1L	61	90.625	ENSPCAG00000011787	-	75	90.625	Procavia_capensis
ENSOPRG00000011846	PABPC1L	99	83.882	ENSPCOG00000020630	PABPC1L	99	83.882	Propithecus_coquereli
ENSOPRG00000011846	PABPC1L	99	82.651	ENSPVAG00000012663	PABPC1L	99	82.651	Pteropus_vampyrus
ENSOPRG00000011846	PABPC1L	99	72.902	ENSPNYG00000004101	pabpc1l	99	72.902	Pundamilia_nyererei
ENSOPRG00000011846	PABPC1L	99	63.360	ENSPNAG00000021248	pabpc1l	99	63.360	Pygocentrus_nattereri
ENSOPRG00000011846	PABPC1L	99	74.595	ENSRNOG00000012750	Pabpc1l	100	74.595	Rattus_norvegicus
ENSOPRG00000011846	PABPC1L	100	86.504	ENSRBIG00000035381	PABPC1L	100	86.504	Rhinopithecus_bieti
ENSOPRG00000011846	PABPC1L	100	86.341	ENSRROG00000044498	PABPC1L	100	86.341	Rhinopithecus_roxellana
ENSOPRG00000011846	PABPC1L	100	85.528	ENSSBOG00000009532	-	100	85.528	Saimiri_boliviensis_boliviensis
ENSOPRG00000011846	PABPC1L	98	70.552	ENSSHAG00000011446	PABPC1L	100	70.552	Sarcophilus_harrisii
ENSOPRG00000011846	PABPC1L	99	71.200	ENSSFOG00015017304	pabpc1l	99	71.200	Scleropages_formosus
ENSOPRG00000011846	PABPC1L	99	66.502	ENSSMAG00000010516	pabpc1l	98	85.271	Scophthalmus_maximus
ENSOPRG00000011846	PABPC1L	99	66.719	ENSSDUG00000014743	pabpc1l	99	66.719	Seriola_dumerili
ENSOPRG00000011846	PABPC1L	98	73.861	ENSSLDG00000006981	pabpc1l	98	74.886	Seriola_lalandi_dorsalis
ENSOPRG00000011846	PABPC1L	99	72.392	ENSSPUG00000004233	PABPC1L	98	72.392	Sphenodon_punctatus
ENSOPRG00000011846	PABPC1L	99	64.686	ENSSPAG00000017137	pabpc1l	99	64.686	Stegastes_partitus
ENSOPRG00000011846	PABPC1L	99	83.908	ENSSSCG00000007382	PABPC1L	99	83.908	Sus_scrofa
ENSOPRG00000011846	PABPC1L	99	72.370	ENSTGUG00000005114	PABPC1L	99	72.370	Taeniopygia_guttata
ENSOPRG00000011846	PABPC1L	97	66.126	ENSTRUG00000011085	pabpc1l	97	66.126	Takifugu_rubripes
ENSOPRG00000011846	PABPC1L	99	63.823	ENSTNIG00000017903	pabpc1l	98	63.823	Tetraodon_nigroviridis
ENSOPRG00000011846	PABPC1L	94	91.438	ENSTBEG00000002851	PABPC1L	80	91.438	Tupaia_belangeri
ENSOPRG00000011846	PABPC1L	94	82.149	ENSTTRG00000007618	PABPC1L	100	82.293	Tursiops_truncatus
ENSOPRG00000011846	PABPC1L	99	82.566	ENSUAMG00000017682	PABPC1L	99	82.566	Ursus_americanus
ENSOPRG00000011846	PABPC1L	69	88.172	ENSUMAG00000025436	PABPC1L	95	88.172	Ursus_maritimus
ENSOPRG00000011846	PABPC1L	99	91.304	ENSVVUG00000018939	PABPC1L	99	91.304	Vulpes_vulpes
ENSOPRG00000011846	PABPC1L	100	67.250	ENSXETG00000022831	pabpc1l	99	67.250	Xenopus_tropicalis
ENSOPRG00000011846	PABPC1L	98	72.143	ENSXCOG00000005459	pabpc1l	99	81.560	Xiphophorus_couchianus
ENSOPRG00000011846	PABPC1L	99	67.472	ENSXMAG00000017135	pabpc1l	99	67.472	Xiphophorus_maculatus