EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000011923 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 8906 bases
Position: chrGeneScaffold_5137:357546-366451
Accession: 101526853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000010876	ResIII	PF04851.15	7.1e-08	1	1
ENSOPRP00000010876	DEAD	PF00270.29	3.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000011919	DDX39B-201	1287	-	ENSOPRP00000010876	428 (aa)	XP_004598780	UPI0001777A46

Gene Model

Click here to download ENSOPRG00000011923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000011923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000011923	DDX39B	82	30.556	ENSOPRG00000002090	-	85	31.008
ENSOPRG00000011923	DDX39B	63	32.841	ENSOPRG00000016112	DDX6	68	32.841
ENSOPRG00000011923	DDX39B	86	38.649	ENSOPRG00000004170	EIF4A2	90	38.649
ENSOPRG00000011923	DDX39B	92	35.787	ENSOPRG00000008591	-	95	35.787
ENSOPRG00000011923	DDX39B	91	32.581	ENSOPRG00000003451	DDX19A	82	32.581
ENSOPRG00000011923	DDX39B	87	32.021	ENSOPRG00000003824	DDX49	80	32.021
ENSOPRG00000011923	DDX39B	67	37.500	ENSOPRG00000013523	-	50	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000011923	DDX39B	100	99.766	ENSG00000198563	DDX39B	100	99.766	Homo_sapiens
ENSOPRG00000011923	DDX39B	100	100.000	ENSAMEG00000009508	DDX39B	99	100.000	Ailuropoda_melanoleuca
ENSOPRG00000011923	DDX39B	99	93.443	ENSACIG00000004534	ddx39b	98	93.443	Amphilophus_citrinellus
ENSOPRG00000011923	DDX39B	100	93.056	ENSATEG00000012366	ddx39b	100	93.056	Anabas_testudineus
ENSOPRG00000011923	DDX39B	100	96.970	ENSACAG00000012240	DDX39B	100	96.970	Anolis_carolinensis
ENSOPRG00000011923	DDX39B	100	99.766	ENSANAG00000030372	DDX39B	100	99.766	Aotus_nancymaae
ENSOPRG00000011923	DDX39B	99	90.553	ENSACLG00000018759	ddx39b	99	90.553	Astatotilapia_calliptera
ENSOPRG00000011923	DDX39B	100	92.661	ENSAMXG00000017837	ddx39b	100	92.661	Astyanax_mexicanus
ENSOPRG00000011923	DDX39B	100	99.533	ENSBTAG00000014490	DDX39B	100	99.533	Bos_taurus
ENSOPRG00000011923	DDX39B	100	99.766	ENSCJAG00000003152	DDX39B	100	99.766	Callithrix_jacchus
ENSOPRG00000011923	DDX39B	100	99.766	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSOPRG00000011923	DDX39B	100	99.766	ENSCAFG00020020530	DDX39B	100	99.766	Canis_lupus_dingo
ENSOPRG00000011923	DDX39B	100	99.533	ENSCHIG00000004579	DDX39B	100	99.533	Capra_hircus
ENSOPRG00000011923	DDX39B	100	99.766	ENSTSYG00000010226	-	100	99.766	Carlito_syrichta
ENSOPRG00000011923	DDX39B	100	85.047	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSOPRG00000011923	DDX39B	100	99.533	ENSCAPG00000010066	DDX39B	100	99.533	Cavia_aperea
ENSOPRG00000011923	DDX39B	100	99.533	ENSCPOG00000002335	DDX39B	100	99.533	Cavia_porcellus
ENSOPRG00000011923	DDX39B	100	99.766	ENSCCAG00000027897	DDX39B	100	99.766	Cebus_capucinus
ENSOPRG00000011923	DDX39B	99	90.118	ENSCATG00000043709	DDX39B	99	90.118	Cercocebus_atys
ENSOPRG00000011923	DDX39B	100	99.533	ENSCLAG00000014555	DDX39B	100	99.533	Chinchilla_lanigera
ENSOPRG00000011923	DDX39B	99	99.529	ENSCSAG00000008517	DDX39B	100	99.529	Chlorocebus_sabaeus
ENSOPRG00000011923	DDX39B	64	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSOPRG00000011923	DDX39B	100	99.766	ENSCANG00000041217	DDX39B	100	99.766	Colobus_angolensis_palliatus
ENSOPRG00000011923	DDX39B	83	84.358	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSOPRG00000011923	DDX39B	57	98.776	ENSCGRG00001017315	-	95	98.544	Cricetulus_griseus_chok1gshd
ENSOPRG00000011923	DDX39B	57	98.776	ENSCGRG00000012479	-	76	98.776	Cricetulus_griseus_crigri
ENSOPRG00000011923	DDX39B	100	92.414	ENSDARG00000036069	ddx39b	100	92.644	Danio_rerio
ENSOPRG00000011923	DDX39B	100	99.766	ENSDNOG00000010215	DDX39B	100	99.766	Dasypus_novemcinctus
ENSOPRG00000011923	DDX39B	87	100.000	ENSDORG00000004985	Ddx39b	100	100.000	Dipodomys_ordii
ENSOPRG00000011923	DDX39B	87	86.631	ENSETEG00000009649	DDX39B	87	86.631	Echinops_telfairi
ENSOPRG00000011923	DDX39B	100	99.766	ENSEASG00005017156	DDX39B	100	99.766	Equus_asinus_asinus
ENSOPRG00000011923	DDX39B	100	99.766	ENSECAG00000007750	DDX39B	100	99.766	Equus_caballus
ENSOPRG00000011923	DDX39B	100	92.575	ENSELUG00000017904	ddx39b	100	92.575	Esox_lucius
ENSOPRG00000011923	DDX39B	100	100.000	ENSFCAG00000004497	DDX39B	100	100.000	Felis_catus
ENSOPRG00000011923	DDX39B	100	99.533	ENSFDAG00000011074	DDX39B	100	99.533	Fukomys_damarensis
ENSOPRG00000011923	DDX39B	74	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSOPRG00000011923	DDX39B	100	99.766	ENSGGOG00000005989	DDX39B	100	99.766	Gorilla_gorilla
ENSOPRG00000011923	DDX39B	100	99.065	ENSHGLG00000019248	DDX39B	100	99.065	Heterocephalus_glaber_female
ENSOPRG00000011923	DDX39B	100	99.065	ENSHGLG00100011850	DDX39B	100	99.065	Heterocephalus_glaber_male
ENSOPRG00000011923	DDX39B	100	91.514	ENSIPUG00000015733	DDX39B	94	91.972	Ictalurus_punctatus
ENSOPRG00000011923	DDX39B	100	99.299	ENSSTOG00000012838	DDX39B	100	99.299	Ictidomys_tridecemlineatus
ENSOPRG00000011923	DDX39B	100	99.065	ENSJJAG00000005660	-	100	99.065	Jaculus_jaculus
ENSOPRG00000011923	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSOPRG00000011923	DDX39B	99	78.487	ENSLBEG00000012254	ddx39b	99	78.487	Labrus_bergylta
ENSOPRG00000011923	DDX39B	100	89.631	ENSLACG00000002110	DDX39B	100	89.631	Latimeria_chalumnae
ENSOPRG00000011923	DDX39B	100	99.533	ENSLAFG00000014202	DDX39B	100	99.533	Loxodonta_africana
ENSOPRG00000011923	DDX39B	100	99.766	ENSMFAG00000034233	DDX39B	100	99.766	Macaca_fascicularis
ENSOPRG00000011923	DDX39B	100	99.766	ENSMMUG00000008839	DDX39B	100	99.766	Macaca_mulatta
ENSOPRG00000011923	DDX39B	100	99.766	ENSMNEG00000041059	DDX39B	100	99.766	Macaca_nemestrina
ENSOPRG00000011923	DDX39B	100	99.766	ENSMLEG00000043791	DDX39B	100	99.766	Mandrillus_leucophaeus
ENSOPRG00000011923	DDX39B	99	90.553	ENSMZEG00005017654	ddx39b	99	90.553	Maylandia_zebra
ENSOPRG00000011923	DDX39B	100	99.065	ENSMAUG00000008059	Ddx39b	100	99.065	Mesocricetus_auratus
ENSOPRG00000011923	DDX39B	100	99.766	ENSMICG00000017349	DDX39B	100	99.766	Microcebus_murinus
ENSOPRG00000011923	DDX39B	100	99.299	ENSMOCG00000011169	Ddx39b	100	99.299	Microtus_ochrogaster
ENSOPRG00000011923	DDX39B	88	99.468	ENSMODG00000015791	DDX39B	88	99.468	Monodelphis_domestica
ENSOPRG00000011923	DDX39B	100	99.299	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSOPRG00000011923	DDX39B	100	99.299	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSOPRG00000011923	DDX39B	100	99.299	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.299	Mus_spretus
ENSOPRG00000011923	DDX39B	100	100.000	ENSMPUG00000011407	DDX39B	100	100.000	Mustela_putorius_furo
ENSOPRG00000011923	DDX39B	73	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSOPRG00000011923	DDX39B	100	99.766	ENSNGAG00000022948	Ddx39b	100	99.766	Nannospalax_galili
ENSOPRG00000011923	DDX39B	100	75.234	ENSNLEG00000006094	DDX39B	100	75.234	Nomascus_leucogenys
ENSOPRG00000011923	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSOPRG00000011923	DDX39B	100	99.299	ENSODEG00000018083	DDX39B	100	99.299	Octodon_degus
ENSOPRG00000011923	DDX39B	100	91.667	ENSONIG00000004740	ddx39b	100	91.667	Oreochromis_niloticus
ENSOPRG00000011923	DDX39B	55	98.734	ENSOANG00000008361	DDX39B	95	98.734	Ornithorhynchus_anatinus
ENSOPRG00000011923	DDX39B	100	96.388	ENSOCUG00000024126	DDX39B	100	96.388	Oryctolagus_cuniculus
ENSOPRG00000011923	DDX39B	100	98.834	ENSOGAG00000028850	-	100	98.834	Otolemur_garnettii
ENSOPRG00000011923	DDX39B	84	91.711	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSOPRG00000011923	DDX39B	100	99.533	ENSOARG00000008787	DDX39B	98	99.533	Ovis_aries
ENSOPRG00000011923	DDX39B	100	99.766	ENSPPAG00000043072	DDX39B	100	99.766	Pan_paniscus
ENSOPRG00000011923	DDX39B	100	100.000	ENSPPRG00000001913	DDX39B	100	100.000	Panthera_pardus
ENSOPRG00000011923	DDX39B	100	99.065	ENSPTIG00000017669	DDX39B	100	99.065	Panthera_tigris_altaica
ENSOPRG00000011923	DDX39B	100	99.766	ENSPTRG00000032509	DDX39B	100	99.766	Pan_troglodytes
ENSOPRG00000011923	DDX39B	100	99.766	ENSPANG00000018609	DDX39B	100	99.766	Papio_anubis
ENSOPRG00000011923	DDX39B	100	91.076	ENSPKIG00000011324	ddx39b	100	91.533	Paramormyrops_kingsleyae
ENSOPRG00000011923	DDX39B	100	99.065	ENSPEMG00000016905	Ddx39b	100	99.065	Peromyscus_maniculatus_bairdii
ENSOPRG00000011923	DDX39B	100	99.766	ENSPCIG00000017572	DDX39B	100	99.766	Phascolarctos_cinereus
ENSOPRG00000011923	DDX39B	100	99.766	ENSPPYG00000016433	DDX39B	100	99.766	Pongo_abelii
ENSOPRG00000011923	DDX39B	66	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSOPRG00000011923	DDX39B	100	99.766	ENSPCOG00000018656	DDX39B	100	99.766	Propithecus_coquereli
ENSOPRG00000011923	DDX39B	100	99.299	ENSPVAG00000004653	DDX39B	100	99.299	Pteropus_vampyrus
ENSOPRG00000011923	DDX39B	99	82.670	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSOPRG00000011923	DDX39B	100	92.431	ENSPNAG00000026926	ddx39b	100	92.431	Pygocentrus_nattereri
ENSOPRG00000011923	DDX39B	100	99.299	ENSRNOG00000000841	Ddx39b	100	99.299	Rattus_norvegicus
ENSOPRG00000011923	DDX39B	100	89.486	ENSRBIG00000031309	DDX39B	100	89.486	Rhinopithecus_bieti
ENSOPRG00000011923	DDX39B	100	99.766	ENSRROG00000039517	DDX39B	100	99.766	Rhinopithecus_roxellana
ENSOPRG00000011923	DDX39B	100	89.486	ENSSBOG00000035513	-	100	89.486	Saimiri_boliviensis_boliviensis
ENSOPRG00000011923	DDX39B	100	99.766	ENSSHAG00000003209	DDX39B	100	99.766	Sarcophilus_harrisii
ENSOPRG00000011923	DDX39B	100	90.847	ENSSFOG00015016107	ddx39b	100	91.533	Scleropages_formosus
ENSOPRG00000011923	DDX39B	100	93.519	ENSSDUG00000011557	ddx39b	100	93.750	Seriola_dumerili
ENSOPRG00000011923	DDX39B	100	93.287	ENSSLDG00000015763	ddx39b	100	93.519	Seriola_lalandi_dorsalis
ENSOPRG00000011923	DDX39B	87	87.968	ENSSARG00000005245	DDX39B	100	87.968	Sorex_araneus
ENSOPRG00000011923	DDX39B	100	97.664	ENSSPUG00000012805	DDX39B	100	97.664	Sphenodon_punctatus
ENSOPRG00000011923	DDX39B	100	99.766	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSOPRG00000011923	DDX39B	100	76.636	ENSTBEG00000003721	DDX39B	100	76.636	Tupaia_belangeri
ENSOPRG00000011923	DDX39B	100	91.224	ENSTTRG00000014074	DDX39B	100	91.224	Tursiops_truncatus
ENSOPRG00000011923	DDX39B	100	87.209	ENSUAMG00000027335	DDX39B	100	87.209	Ursus_americanus
ENSOPRG00000011923	DDX39B	100	91.121	ENSUMAG00000015124	DDX39B	100	91.121	Ursus_maritimus
ENSOPRG00000011923	DDX39B	61	99.115	ENSVPAG00000009167	-	74	99.115	Vicugna_pacos
ENSOPRG00000011923	DDX39B	100	99.766	ENSVVUG00000019518	DDX39B	99	99.766	Vulpes_vulpes
ENSOPRG00000011923	DDX39B	100	83.721	ENSXETG00000002498	ddx39b	99	83.721	Xenopus_tropicalis