EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOPRG00000011984 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Ochotona_princeps
Status
putative
Strand
Minus strand
Length
12505 bases
Position
chrGeneScaffold_628:382-12886
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOPRP00000010951PABPPF00658.187.9e-2611
ENSOPRP00000010951RRM_5PF13893.63.2e-0911
ENSOPRP00000010951RRM_1PF00076.226.9e-9414
ENSOPRP00000010951RRM_1PF00076.226.9e-9424
ENSOPRP00000010951RRM_1PF00076.226.9e-9434
ENSOPRP00000010951RRM_1PF00076.226.9e-9444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOPRT00000012001PABPC4-2011860-ENSOPRP00000010951620 (aa)-UPI00017758A2
Gene Model
Click here to download ENSOPRG00000011984's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000011984's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOPRG00000011984PABPC45736.905ENSOPRG00000001066TIA17136.905
ENSOPRG00000011984PABPC46034.940ENSOPRG00000012874ELAVL28334.940
ENSOPRG00000011984PABPC48184.127ENSOPRG00000011846PABPC1L8184.127
ENSOPRG00000011984PABPC48790.476ENSOPRG00000009667PABPC38590.476
ENSOPRG00000011984PABPC45930.526ENSOPRG00000009691-9530.526
ENSOPRG00000011984PABPC45965.500ENSOPRG00000000856PABPC59465.217
ENSOPRG00000011984PABPC45939.474ENSOPRG00000011502CELF25939.474
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOPRG00000011984PABPC48798.737ENSG00000090621PABPC4100100.000Homo_sapiens
ENSOPRG00000011984PABPC48793.651ENSAPOG00000001161pabpc48693.651Acanthochromis_polyacanthus
ENSOPRG00000011984PABPC48360.398ENSAMEG00000015083-8360.398Ailuropoda_melanoleuca
ENSOPRG00000011984PABPC48798.526ENSAMEG00000011535-8298.526Ailuropoda_melanoleuca
ENSOPRG00000011984PABPC48793.651ENSACIG00000023343pabpc48593.651Amphilophus_citrinellus
ENSOPRG00000011984PABPC48793.651ENSAOCG00000021529pabpc48693.651Amphiprion_ocellaris
ENSOPRG00000011984PABPC48793.651ENSAPEG00000019196pabpc48693.651Amphiprion_percula
ENSOPRG00000011984PABPC48793.651ENSATEG00000007402pabpc48693.651Anabas_testudineus
ENSOPRG00000011984PABPC48792.063ENSAPLG00000009729-8592.063Anas_platyrhynchos
ENSOPRG00000011984PABPC48692.063ENSACAG00000002544PABPC48492.063Anolis_carolinensis
ENSOPRG00000011984PABPC48798.526ENSANAG00000025079PABPC48598.526Aotus_nancymaae
ENSOPRG00000011984PABPC48693.651ENSACLG00000019558pabpc48593.651Astatotilapia_calliptera
ENSOPRG00000011984PABPC48690.476ENSAMXG00000018779pabpc48490.476Astyanax_mexicanus
ENSOPRG00000011984PABPC45886.826ENSBTAG00000048536-9886.826Bos_taurus
ENSOPRG00000011984PABPC48698.511ENSBTAG00000017125PABPC48398.511Bos_taurus
ENSOPRG00000011984PABPC48798.526ENSCJAG00000002512-8598.526Callithrix_jacchus
ENSOPRG00000011984PABPC47593.151ENSCJAG00000045953-8493.151Callithrix_jacchus
ENSOPRG00000011984PABPC48798.737ENSCAFG00000003081PABPC48598.737Canis_familiaris
ENSOPRG00000011984PABPC48798.737ENSCAFG00020004161PABPC48298.737Canis_lupus_dingo
ENSOPRG00000011984PABPC48393.478ENSCHIG00000023385-8193.478Capra_hircus
ENSOPRG00000011984PABPC48798.316ENSCHIG00000019398-8298.316Capra_hircus
ENSOPRG00000011984PABPC48798.947ENSTSYG00000006532PABPC48598.947Carlito_syrichta
ENSOPRG00000011984PABPC48698.520ENSCAPG00000015984PABPC49095.238Cavia_aperea
ENSOPRG00000011984PABPC48798.526ENSCPOG00000009552PABPC48598.526Cavia_porcellus
ENSOPRG00000011984PABPC48798.737ENSCCAG00000037306PABPC48598.737Cebus_capucinus
ENSOPRG00000011984PABPC48798.737ENSCATG00000042164PABPC48598.737Cercocebus_atys
ENSOPRG00000011984PABPC48798.947ENSCLAG00000011899PABPC48598.947Chinchilla_lanigera
ENSOPRG00000011984PABPC48798.737ENSCSAG00000001135PABPC48298.737Chlorocebus_sabaeus
ENSOPRG00000011984PABPC48197.098ENSCHOG00000005327PABPC47497.098Choloepus_hoffmanni
ENSOPRG00000011984PABPC48793.263ENSCPBG00000001038PABPC48593.263Chrysemys_picta_bellii
ENSOPRG00000011984PABPC48698.712ENSCANG00000034177PABPC48598.712Colobus_angolensis_palliatus
ENSOPRG00000011984PABPC48797.684ENSCGRG00001018166Pabpc48797.252Cricetulus_griseus_chok1gshd
ENSOPRG00000011984PABPC48697.198ENSCGRG00000009777Pabpc48797.198Cricetulus_griseus_crigri
ENSOPRG00000011984PABPC48692.063ENSCSEG00000000130pabpc48592.063Cynoglossus_semilaevis
ENSOPRG00000011984PABPC48593.651ENSCVAG00000019246pabpc48593.651Cyprinodon_variegatus
ENSOPRG00000011984PABPC48690.476ENSDARG00000059259pabpc48890.476Danio_rerio
ENSOPRG00000011984PABPC48698.762ENSDNOG00000018444-8398.762Dasypus_novemcinctus
ENSOPRG00000011984PABPC48698.511ENSDORG00000011581Pabpc48398.511Dipodomys_ordii
ENSOPRG00000011984PABPC47266.667ENSETEG00000009172-8166.667Echinops_telfairi
ENSOPRG00000011984PABPC487100.000ENSETEG00000018453-66100.000Echinops_telfairi
ENSOPRG00000011984PABPC48688.889ENSEBUG00000013782pabpc48688.889Eptatretus_burgeri
ENSOPRG00000011984PABPC48585.714ENSEBUG00000000992pabpc48985.714Eptatretus_burgeri
ENSOPRG00000011984PABPC48798.947ENSEASG00005014119PABPC48695.238Equus_asinus_asinus
ENSOPRG00000011984PABPC48798.947ENSECAG00000009396PABPC48695.238Equus_caballus
ENSOPRG00000011984PABPC48795.789ENSEEUG00000002962PABPC48195.789Erinaceus_europaeus
ENSOPRG00000011984PABPC48690.476ENSELUG00000003195pabpc48390.476Esox_lucius
ENSOPRG00000011984PABPC48798.737ENSFCAG00000015254-8598.737Felis_catus
ENSOPRG00000011984PABPC48792.063ENSFALG00000000543PABPC48592.063Ficedula_albicollis
ENSOPRG00000011984PABPC46669.231ENSFDAG00000010581-6962.745Fukomys_damarensis
ENSOPRG00000011984PABPC48798.947ENSFDAG00000020016-8298.947Fukomys_damarensis
ENSOPRG00000011984PABPC48693.651ENSFHEG00000007548pabpc48693.651Fundulus_heteroclitus
ENSOPRG00000011984PABPC48690.476ENSGMOG00000019025pabpc48490.476Gadus_morhua
ENSOPRG00000011984PABPC48792.842ENSGALG00000003800PABPC48592.842Gallus_gallus
ENSOPRG00000011984PABPC48693.651ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSOPRG00000011984PABPC48692.063ENSGACG00000007179pabpc48592.063Gasterosteus_aculeatus
ENSOPRG00000011984PABPC48793.263ENSGAGG00000001888PABPC48593.263Gopherus_agassizii
ENSOPRG00000011984PABPC48798.737ENSGGOG00000004002PABPC48598.737Gorilla_gorilla
ENSOPRG00000011984PABPC48695.238ENSHBUG00000020206pabpc48595.238Haplochromis_burtoni
ENSOPRG00000011984PABPC48798.947ENSHGLG00000011162PABPC48598.947Heterocephalus_glaber_female
ENSOPRG00000011984PABPC48798.947ENSHGLG00100001580PABPC48598.947Heterocephalus_glaber_male
ENSOPRG00000011984PABPC48692.063ENSHCOG00000012694pabpc48592.063Hippocampus_comes
ENSOPRG00000011984PABPC48690.476ENSIPUG00000016620pabpc48490.476Ictalurus_punctatus
ENSOPRG00000011984PABPC48698.934ENSSTOG00000010416PABPC48798.934Ictidomys_tridecemlineatus
ENSOPRG00000011984PABPC48796.825ENSJJAG00000007781Pabpc48596.825Jaculus_jaculus
ENSOPRG00000011984PABPC48693.651ENSKMAG00000013597pabpc48793.651Kryptolebias_marmoratus
ENSOPRG00000011984PABPC48793.651ENSLBEG00000013654pabpc48693.651Labrus_bergylta
ENSOPRG00000011984PABPC48692.063ENSLACG00000011907PABPC48492.063Latimeria_chalumnae
ENSOPRG00000011984PABPC48590.476ENSLOCG00000001877pabpc48391.026Lepisosteus_oculatus
ENSOPRG00000011984PABPC48798.737ENSLAFG00000000151PABPC48798.934Loxodonta_africana
ENSOPRG00000011984PABPC48798.737ENSMFAG00000041481PABPC48598.737Macaca_fascicularis
ENSOPRG00000011984PABPC48798.737ENSMMUG00000007497PABPC48298.737Macaca_mulatta
ENSOPRG00000011984PABPC48798.737ENSMNEG00000043054PABPC48598.737Macaca_nemestrina
ENSOPRG00000011984PABPC48798.737ENSMLEG00000040716PABPC48598.737Mandrillus_leucophaeus
ENSOPRG00000011984PABPC48693.651ENSMAMG00000010025pabpc48993.651Mastacembelus_armatus
ENSOPRG00000011984PABPC48693.651ENSMZEG00005006141pabpc48593.651Maylandia_zebra
ENSOPRG00000011984PABPC48592.875ENSMGAG00000005408PABPC48092.875Meleagris_gallopavo
ENSOPRG00000011984PABPC45881.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSOPRG00000011984PABPC47388.462ENSMAUG00000001295-9788.462Mesocricetus_auratus
ENSOPRG00000011984PABPC47295.238ENSMAUG00000019763-7595.238Mesocricetus_auratus
ENSOPRG00000011984PABPC48692.574ENSMICG00000036729-9192.574Microcebus_murinus
ENSOPRG00000011984PABPC47699.147ENSMICG00000016633-9398.667Microcebus_murinus
ENSOPRG00000011984PABPC48797.684ENSMOCG00000006763Pabpc49095.238Microtus_ochrogaster
ENSOPRG00000011984PABPC48193.651ENSMMOG00000002363pabpc48393.651Mola_mola
ENSOPRG00000011984PABPC46482.500ENSMODG00000019847-6882.500Monodelphis_domestica
ENSOPRG00000011984PABPC46073.446ENSMODG00000018051-9173.446Monodelphis_domestica
ENSOPRG00000011984PABPC48795.238ENSMODG00000017657-8295.238Monodelphis_domestica
ENSOPRG00000011984PABPC48693.651ENSMALG00000011017pabpc48593.651Monopterus_albus
ENSOPRG00000011984PABPC48796.632MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSOPRG00000011984PABPC47692.982MGP_CAROLIEiJ_G0024864-7292.982Mus_caroli
ENSOPRG00000011984PABPC48796.842ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSOPRG00000011984PABPC48596.996MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSOPRG00000011984PABPC48695.238MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSOPRG00000011984PABPC48798.737ENSMPUG00000014414-8298.737Mustela_putorius_furo
ENSOPRG00000011984PABPC48555.738ENSMPUG00000006836-8755.738Mustela_putorius_furo
ENSOPRG00000011984PABPC48699.147ENSMLUG00000012068PABPC48799.147Myotis_lucifugus
ENSOPRG00000011984PABPC48698.507ENSNGAG00000018292Pabpc48798.507Nannospalax_galili
ENSOPRG00000011984PABPC46886.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSOPRG00000011984PABPC46092.308ENSNBRG00000009708pabpc49892.308Neolamprologus_brichardi
ENSOPRG00000011984PABPC48798.737ENSNLEG00000011928PABPC48598.737Nomascus_leucogenys
ENSOPRG00000011984PABPC45485.714ENSODEG00000013457-10085.714Octodon_degus
ENSOPRG00000011984PABPC48798.526ENSODEG00000006592-8698.526Octodon_degus
ENSOPRG00000011984PABPC48595.238ENSODEG00000017434-8494.667Octodon_degus
ENSOPRG00000011984PABPC48693.651ENSONIG00000008176pabpc48593.651Oreochromis_niloticus
ENSOPRG00000011984PABPC48792.063ENSOANG00000010001PABPC48592.063Ornithorhynchus_anatinus
ENSOPRG00000011984PABPC48799.579ENSOCUG00000000562PABPC47599.579Oryctolagus_cuniculus
ENSOPRG00000011984PABPC48693.651ENSORLG00000017479pabpc48593.651Oryzias_latipes
ENSOPRG00000011984PABPC48693.651ENSORLG00020018644pabpc48593.651Oryzias_latipes_hni
ENSOPRG00000011984PABPC48693.651ENSORLG00015015042pabpc48593.651Oryzias_latipes_hsok
ENSOPRG00000011984PABPC48693.651ENSOMEG00000014410pabpc49393.651Oryzias_melastigma
ENSOPRG00000011984PABPC48698.936ENSOGAG00000004067PABPC48298.936Otolemur_garnettii
ENSOPRG00000011984PABPC48798.316ENSOARG00000020060PABPC48298.316Ovis_aries
ENSOPRG00000011984PABPC48798.737ENSPPAG00000043625PABPC48598.737Pan_paniscus
ENSOPRG00000011984PABPC48798.737ENSPPRG00000024727PABPC48598.737Panthera_pardus
ENSOPRG00000011984PABPC48798.737ENSPTIG00000005829PABPC48598.737Panthera_tigris_altaica
ENSOPRG00000011984PABPC48798.737ENSPTRG00000000573PABPC48598.737Pan_troglodytes
ENSOPRG00000011984PABPC48798.526ENSPANG00000009484PABPC48598.526Papio_anubis
ENSOPRG00000011984PABPC48690.476ENSPKIG00000025356pabpc48790.476Paramormyrops_kingsleyae
ENSOPRG00000011984PABPC48793.263ENSPSIG00000016892PABPC48593.263Pelodiscus_sinensis
ENSOPRG00000011984PABPC48493.651ENSPMGG00000009073pabpc48893.651Periophthalmus_magnuspinnatus
ENSOPRG00000011984PABPC48797.684ENSPEMG00000023569-8597.684Peromyscus_maniculatus_bairdii
ENSOPRG00000011984PABPC48495.238ENSPEMG00000024193-8195.238Peromyscus_maniculatus_bairdii
ENSOPRG00000011984PABPC48485.714ENSPMAG00000007885pabpc48185.714Petromyzon_marinus
ENSOPRG00000011984PABPC47677.160ENSPMAG00000002836pabpc48578.189Petromyzon_marinus
ENSOPRG00000011984PABPC48795.238ENSPCIG00000020674PABPC49395.238Phascolarctos_cinereus
ENSOPRG00000011984PABPC48693.651ENSPFOG00000002682pabpc48593.651Poecilia_formosa
ENSOPRG00000011984PABPC48693.651ENSPLAG00000010112pabpc48593.651Poecilia_latipinna
ENSOPRG00000011984PABPC48693.651ENSPMEG00000019739pabpc48593.651Poecilia_mexicana
ENSOPRG00000011984PABPC48693.651ENSPREG00000001589pabpc48593.651Poecilia_reticulata
ENSOPRG00000011984PABPC48798.737ENSPPYG00000001506PABPC48298.737Pongo_abelii
ENSOPRG00000011984PABPC48795.238ENSPCAG00000003341PABPC48295.238Procavia_capensis
ENSOPRG00000011984PABPC48798.947ENSPCOG00000023725-8598.947Propithecus_coquereli
ENSOPRG00000011984PABPC48590.323ENSPCOG00000025882-8890.323Propithecus_coquereli
ENSOPRG00000011984PABPC48698.293ENSPVAG00000002187PABPC47998.293Pteropus_vampyrus
ENSOPRG00000011984PABPC48693.651ENSPNYG00000006134pabpc48593.651Pundamilia_nyererei
ENSOPRG00000011984PABPC48690.476ENSPNAG00000024355pabpc48590.476Pygocentrus_nattereri
ENSOPRG00000011984PABPC48695.238ENSRNOG00000028592AABR07035074.18395.238Rattus_norvegicus
ENSOPRG00000011984PABPC48697.234ENSRNOG00000015642Pabpc48397.234Rattus_norvegicus
ENSOPRG00000011984PABPC48798.737ENSRBIG00000039761PABPC48598.737Rhinopithecus_bieti
ENSOPRG00000011984PABPC48798.737ENSRROG00000033355PABPC48598.737Rhinopithecus_roxellana
ENSOPRG00000011984PABPC48798.526ENSSBOG00000026193PABPC48598.526Saimiri_boliviensis_boliviensis
ENSOPRG00000011984PABPC48795.238ENSSHAG00000018139PABPC48595.238Sarcophilus_harrisii
ENSOPRG00000011984PABPC48690.476ENSSFOG00015023514pabpc48490.476Scleropages_formosus
ENSOPRG00000011984PABPC48693.651ENSSMAG00000009007pabpc48593.651Scophthalmus_maximus
ENSOPRG00000011984PABPC48693.651ENSSDUG00000012683pabpc48693.651Seriola_dumerili
ENSOPRG00000011984PABPC48693.651ENSSLDG00000013025pabpc48893.651Seriola_lalandi_dorsalis
ENSOPRG00000011984PABPC48793.651ENSSARG00000000310PABPC48193.651Sorex_araneus
ENSOPRG00000011984PABPC48792.632ENSSPUG00000003204PABPC48592.949Sphenodon_punctatus
ENSOPRG00000011984PABPC48593.651ENSSPAG00000009252pabpc48993.651Stegastes_partitus
ENSOPRG00000011984PABPC47068.421ENSSSCG00000036170-7668.421Sus_scrofa
ENSOPRG00000011984PABPC48798.526ENSSSCG00000003660-8598.526Sus_scrofa
ENSOPRG00000011984PABPC48792.063ENSTGUG00000001266PABPC48192.063Taeniopygia_guttata
ENSOPRG00000011984PABPC48692.063ENSTRUG00000005907pabpc48592.063Takifugu_rubripes
ENSOPRG00000011984PABPC48592.063ENSTNIG00000016902pabpc48292.063Tetraodon_nigroviridis
ENSOPRG00000011984PABPC48695.238ENSTBEG00000009035PABPC47995.238Tupaia_belangeri
ENSOPRG00000011984PABPC48695.238ENSTTRG00000014340PABPC47895.238Tursiops_truncatus
ENSOPRG00000011984PABPC48798.737ENSUAMG00000000303PABPC48598.737Ursus_americanus
ENSOPRG00000011984PABPC48798.526ENSUMAG00000019585PABPC49497.072Ursus_maritimus
ENSOPRG00000011984PABPC47195.000ENSVPAG00000010041PABPC46095.000Vicugna_pacos
ENSOPRG00000011984PABPC48798.737ENSVVUG00000005215PABPC48598.737Vulpes_vulpes
ENSOPRG00000011984PABPC46097.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSOPRG00000011984PABPC48790.476ENSXETG00000010946pabpc48690.476Xenopus_tropicalis
ENSOPRG00000011984PABPC48593.651ENSXCOG00000013190pabpc49689.151Xiphophorus_couchianus
ENSOPRG00000011984PABPC48693.651ENSXMAG00000019007pabpc48593.651Xiphophorus_maculatus

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