EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000012048 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 19626 bases
Position: chrGeneScaffold_3200:80764-100389
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000010997	TRM13	PF05206.14	5.3e-46	1	2
ENSOPRP00000010997	TRM13	PF05206.14	5.3e-46	2	2
ENSOPRP00000010997	zf-U11-48K	PF05253.12	1.3e-09	1	1
ENSOPRP00000010997	zf-TRM13_CCCH	PF11722.8	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000012049	TRMT13-201	1440	-	ENSOPRP00000010997	479 (aa)	-	UPI0001777712

Gene Model

Click here to download ENSOPRG00000012048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000012048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000012048	TRMT13	67	89.706	ENSG00000122435	TRMT13	100	86.239	Homo_sapiens
ENSOPRG00000012048	TRMT13	54	53.633	ENSAPOG00000015131	trmt13	59	53.633	Acanthochromis_polyacanthus
ENSOPRG00000012048	TRMT13	67	88.971	ENSAMEG00000008917	TRMT13	67	88.971	Ailuropoda_melanoleuca
ENSOPRG00000012048	TRMT13	54	58.113	ENSACIG00000005804	trmt13	94	47.407	Amphilophus_citrinellus
ENSOPRG00000012048	TRMT13	54	53.220	ENSAOCG00000023585	trmt13	60	53.220	Amphiprion_ocellaris
ENSOPRG00000012048	TRMT13	54	53.220	ENSAPEG00000004025	trmt13	60	53.220	Amphiprion_percula
ENSOPRG00000012048	TRMT13	66	57.875	ENSATEG00000006597	trmt13	68	57.875	Anabas_testudineus
ENSOPRG00000012048	TRMT13	55	74.775	ENSAPLG00000014924	TRMT13	62	74.775	Anas_platyrhynchos
ENSOPRG00000012048	TRMT13	65	68.015	ENSACAG00000003498	TRMT13	66	68.015	Anolis_carolinensis
ENSOPRG00000012048	TRMT13	67	90.441	ENSANAG00000019525	TRMT13	100	88.073	Aotus_nancymaae
ENSOPRG00000012048	TRMT13	54	59.623	ENSACLG00000020018	trmt13	59	59.623	Astatotilapia_calliptera
ENSOPRG00000012048	TRMT13	62	67.500	ENSAMXG00000017963	trmt13	64	67.500	Astyanax_mexicanus
ENSOPRG00000012048	TRMT13	67	88.235	ENSBTAG00000015781	TRMT13	67	88.235	Bos_taurus
ENSOPRG00000012048	TRMT13	53	30.534	WBGene00013026	Y49A3A.3	64	30.534	Caenorhabditis_elegans
ENSOPRG00000012048	TRMT13	67	88.603	ENSCJAG00000000200	TRMT13	99	88.073	Callithrix_jacchus
ENSOPRG00000012048	TRMT13	57	90.476	ENSCAFG00020011572	TRMT13	95	90.476	Canis_lupus_dingo
ENSOPRG00000012048	TRMT13	67	89.338	ENSCHIG00000015395	TRMT13	67	89.338	Capra_hircus
ENSOPRG00000012048	TRMT13	63	90.114	ENSTSYG00000010811	TRMT13	98	87.879	Carlito_syrichta
ENSOPRG00000012048	TRMT13	67	91.176	ENSCPOG00000000694	TRMT13	67	91.176	Cavia_porcellus
ENSOPRG00000012048	TRMT13	67	89.706	ENSCCAG00000023772	TRMT13	100	87.156	Cebus_capucinus
ENSOPRG00000012048	TRMT13	67	90.074	ENSCATG00000033556	TRMT13	100	87.156	Cercocebus_atys
ENSOPRG00000012048	TRMT13	56	90.367	ENSCLAG00000008220	TRMT13	64	90.367	Chinchilla_lanigera
ENSOPRG00000012048	TRMT13	67	90.441	ENSCSAG00000001506	TRMT13	67	90.441	Chlorocebus_sabaeus
ENSOPRG00000012048	TRMT13	65	73.063	ENSCPBG00000026671	TRMT13	66	73.063	Chrysemys_picta_bellii
ENSOPRG00000012048	TRMT13	67	90.809	ENSCANG00000034659	TRMT13	100	88.073	Colobus_angolensis_palliatus
ENSOPRG00000012048	TRMT13	67	88.278	ENSCGRG00001021601	Trmt13	67	88.278	Cricetulus_griseus_chok1gshd
ENSOPRG00000012048	TRMT13	54	54.054	ENSCSEG00000000591	trmt13	59	54.054	Cynoglossus_semilaevis
ENSOPRG00000012048	TRMT13	54	54.545	ENSCVAG00000017342	trmt13	55	54.545	Cyprinodon_variegatus
ENSOPRG00000012048	TRMT13	65	62.500	ENSDARG00000102846	trmt13	66	62.500	Danio_rerio
ENSOPRG00000012048	TRMT13	57	85.870	ENSDNOG00000001710	TRMT13	84	85.870	Dasypus_novemcinctus
ENSOPRG00000012048	TRMT13	67	88.971	ENSDORG00000015808	Trmt13	66	88.971	Dipodomys_ordii
ENSOPRG00000012048	TRMT13	54	32.491	FBgn0037435	CG18048	62	32.491	Drosophila_melanogaster
ENSOPRG00000012048	TRMT13	66	86.364	ENSETEG00000005819	TRMT13	66	86.364	Echinops_telfairi
ENSOPRG00000012048	TRMT13	61	58.974	ENSEBUG00000014444	trmt13	65	58.974	Eptatretus_burgeri
ENSOPRG00000012048	TRMT13	67	91.544	ENSEASG00005015918	TRMT13	67	91.544	Equus_asinus_asinus
ENSOPRG00000012048	TRMT13	67	91.176	ENSECAG00000022626	TRMT13	67	91.176	Equus_caballus
ENSOPRG00000012048	TRMT13	60	88.889	ENSEEUG00000000294	TRMT13	61	88.889	Erinaceus_europaeus
ENSOPRG00000012048	TRMT13	65	67.442	ENSELUG00000003803	trmt13	66	67.442	Esox_lucius
ENSOPRG00000012048	TRMT13	67	90.809	ENSFCAG00000030618	TRMT13	100	88.991	Felis_catus
ENSOPRG00000012048	TRMT13	66	70.956	ENSFALG00000002424	TRMT13	66	70.956	Ficedula_albicollis
ENSOPRG00000012048	TRMT13	66	90.809	ENSFDAG00000006342	TRMT13	66	90.809	Fukomys_damarensis
ENSOPRG00000012048	TRMT13	54	55.513	ENSFHEG00000022954	trmt13	64	55.513	Fundulus_heteroclitus
ENSOPRG00000012048	TRMT13	62	70.000	ENSGMOG00000013223	trmt13	73	70.000	Gadus_morhua
ENSOPRG00000012048	TRMT13	62	72.549	ENSGALG00000005290	TRMT13	65	70.370	Gallus_gallus
ENSOPRG00000012048	TRMT13	54	53.333	ENSGAFG00000001577	trmt13	79	52.896	Gambusia_affinis
ENSOPRG00000012048	TRMT13	53	58.015	ENSGACG00000013428	trmt13	61	55.273	Gasterosteus_aculeatus
ENSOPRG00000012048	TRMT13	63	75.769	ENSGAGG00000023303	TRMT13	94	75.769	Gopherus_agassizii
ENSOPRG00000012048	TRMT13	67	89.706	ENSGGOG00000005616	TRMT13	100	85.321	Gorilla_gorilla
ENSOPRG00000012048	TRMT13	54	59.623	ENSHBUG00000007754	trmt13	59	59.623	Haplochromis_burtoni
ENSOPRG00000012048	TRMT13	66	90.441	ENSHGLG00000002164	TRMT13	66	90.441	Heterocephalus_glaber_female
ENSOPRG00000012048	TRMT13	66	90.441	ENSHGLG00100001618	TRMT13	66	90.441	Heterocephalus_glaber_male
ENSOPRG00000012048	TRMT13	53	54.054	ENSHCOG00000020553	trmt13	60	54.054	Hippocampus_comes
ENSOPRG00000012048	TRMT13	62	70.000	ENSIPUG00000024787	trmt13	93	59.124	Ictalurus_punctatus
ENSOPRG00000012048	TRMT13	67	91.176	ENSSTOG00000013483	TRMT13	67	91.176	Ictidomys_tridecemlineatus
ENSOPRG00000012048	TRMT13	64	89.354	ENSJJAG00000018012	Trmt13	65	89.354	Jaculus_jaculus
ENSOPRG00000012048	TRMT13	63	56.818	ENSLBEG00000020238	trmt13	67	56.818	Labrus_bergylta
ENSOPRG00000012048	TRMT13	63	74.359	ENSLACG00000013153	TRMT13	65	74.359	Latimeria_chalumnae
ENSOPRG00000012048	TRMT13	62	67.568	ENSLOCG00000000418	trmt13	64	67.568	Lepisosteus_oculatus
ENSOPRG00000012048	TRMT13	67	90.441	ENSMFAG00000034681	TRMT13	100	88.073	Macaca_fascicularis
ENSOPRG00000012048	TRMT13	67	90.441	ENSMMUG00000004243	TRMT13	100	88.073	Macaca_mulatta
ENSOPRG00000012048	TRMT13	67	90.441	ENSMNEG00000036102	TRMT13	100	88.073	Macaca_nemestrina
ENSOPRG00000012048	TRMT13	67	90.074	ENSMLEG00000034258	TRMT13	100	87.156	Mandrillus_leucophaeus
ENSOPRG00000012048	TRMT13	63	56.870	ENSMAMG00000016597	trmt13	67	56.870	Mastacembelus_armatus
ENSOPRG00000012048	TRMT13	54	59.245	ENSMZEG00005020959	trmt13	59	59.245	Maylandia_zebra
ENSOPRG00000012048	TRMT13	56	74.554	ENSMGAG00000006970	TRMT13	64	74.554	Meleagris_gallopavo
ENSOPRG00000012048	TRMT13	66	88.971	ENSMAUG00000010448	Trmt13	66	88.971	Mesocricetus_auratus
ENSOPRG00000012048	TRMT13	67	91.544	ENSMICG00000005283	TRMT13	100	90.826	Microcebus_murinus
ENSOPRG00000012048	TRMT13	67	89.338	ENSMOCG00000019914	Trmt13	67	89.338	Microtus_ochrogaster
ENSOPRG00000012048	TRMT13	54	50.943	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSOPRG00000012048	TRMT13	66	81.159	ENSMODG00000003646	TRMT13	66	81.159	Monodelphis_domestica
ENSOPRG00000012048	TRMT13	66	62.222	ENSMALG00000020965	trmt13	90	43.571	Monopterus_albus
ENSOPRG00000012048	TRMT13	66	90.074	MGP_CAROLIEiJ_G0025568	Trmt13	94	89.881	Mus_caroli
ENSOPRG00000012048	TRMT13	66	89.338	ENSMUSG00000033439	Trmt13	94	89.881	Mus_musculus
ENSOPRG00000012048	TRMT13	66	90.809	MGP_PahariEiJ_G0027014	Trmt13	93	90.809	Mus_pahari
ENSOPRG00000012048	TRMT13	66	89.706	MGP_SPRETEiJ_G0026518	Trmt13	94	89.881	Mus_spretus
ENSOPRG00000012048	TRMT13	66	89.338	ENSMLUG00000002124	TRMT13	66	89.338	Myotis_lucifugus
ENSOPRG00000012048	TRMT13	57	48.921	ENSNBRG00000006783	trmt13	54	56.904	Neolamprologus_brichardi
ENSOPRG00000012048	TRMT13	67	89.706	ENSNLEG00000035917	TRMT13	100	87.156	Nomascus_leucogenys
ENSOPRG00000012048	TRMT13	52	75.000	ENSMEUG00000013346	-	100	75.000	Notamacropus_eugenii
ENSOPRG00000012048	TRMT13	57	57.348	ENSONIG00000004574	trmt13	59	59.245	Oreochromis_niloticus
ENSOPRG00000012048	TRMT13	56	80.357	ENSOANG00000012057	TRMT13	62	80.357	Ornithorhynchus_anatinus
ENSOPRG00000012048	TRMT13	67	94.118	ENSOCUG00000023095	TRMT13	67	94.118	Oryctolagus_cuniculus
ENSOPRG00000012048	TRMT13	63	60.000	ENSORLG00000003320	trmt13	67	60.000	Oryzias_latipes
ENSOPRG00000012048	TRMT13	62	56.410	ENSORLG00020005972	trmt13	65	57.447	Oryzias_latipes_hni
ENSOPRG00000012048	TRMT13	63	56.015	ENSORLG00015002270	trmt13	67	56.015	Oryzias_latipes_hsok
ENSOPRG00000012048	TRMT13	64	56.767	ENSOMEG00000006724	trmt13	65	56.767	Oryzias_melastigma
ENSOPRG00000012048	TRMT13	65	90.809	ENSOGAG00000005618	TRMT13	64	90.809	Otolemur_garnettii
ENSOPRG00000012048	TRMT13	67	89.338	ENSOARG00000017983	TRMT13	67	89.338	Ovis_aries
ENSOPRG00000012048	TRMT13	67	89.338	ENSPPAG00000043736	TRMT13	100	86.239	Pan_paniscus
ENSOPRG00000012048	TRMT13	67	90.809	ENSPPRG00000003424	TRMT13	100	88.991	Panthera_pardus
ENSOPRG00000012048	TRMT13	67	90.809	ENSPTIG00000018598	TRMT13	100	88.991	Panthera_tigris_altaica
ENSOPRG00000012048	TRMT13	67	89.338	ENSPTRG00000001001	TRMT13	100	86.239	Pan_troglodytes
ENSOPRG00000012048	TRMT13	67	90.441	ENSPANG00000007598	TRMT13	100	88.073	Papio_anubis
ENSOPRG00000012048	TRMT13	63	60.547	ENSPKIG00000001514	trmt13	67	60.547	Paramormyrops_kingsleyae
ENSOPRG00000012048	TRMT13	50	74.380	ENSPSIG00000012703	TRMT13	58	74.380	Pelodiscus_sinensis
ENSOPRG00000012048	TRMT13	62	60.000	ENSPMGG00000013298	trmt13	63	60.000	Periophthalmus_magnuspinnatus
ENSOPRG00000012048	TRMT13	67	89.338	ENSPEMG00000000275	Trmt13	67	89.338	Peromyscus_maniculatus_bairdii
ENSOPRG00000012048	TRMT13	54	53.184	ENSPMAG00000000823	trmt13	56	53.184	Petromyzon_marinus
ENSOPRG00000012048	TRMT13	65	80.515	ENSPCIG00000007699	TRMT13	66	81.618	Phascolarctos_cinereus
ENSOPRG00000012048	TRMT13	57	53.309	ENSPFOG00000008675	trmt13	69	62.500	Poecilia_formosa
ENSOPRG00000012048	TRMT13	54	54.074	ENSPLAG00000009709	trmt13	69	62.500	Poecilia_latipinna
ENSOPRG00000012048	TRMT13	54	53.333	ENSPMEG00000022954	trmt13	60	53.333	Poecilia_mexicana
ENSOPRG00000012048	TRMT13	54	53.704	ENSPREG00000005645	trmt13	90	51.282	Poecilia_reticulata
ENSOPRG00000012048	TRMT13	67	89.338	ENSPPYG00000001120	TRMT13	67	89.338	Pongo_abelii
ENSOPRG00000012048	TRMT13	67	88.235	ENSPCAG00000002340	TRMT13	66	88.235	Procavia_capensis
ENSOPRG00000012048	TRMT13	67	90.441	ENSPCOG00000017984	TRMT13	100	89.908	Propithecus_coquereli
ENSOPRG00000012048	TRMT13	67	90.809	ENSPVAG00000017430	TRMT13	67	90.809	Pteropus_vampyrus
ENSOPRG00000012048	TRMT13	54	56.226	ENSPNYG00000013690	trmt13	57	56.226	Pundamilia_nyererei
ENSOPRG00000012048	TRMT13	62	65.000	ENSPNAG00000022130	trmt13	64	65.000	Pygocentrus_nattereri
ENSOPRG00000012048	TRMT13	66	89.338	ENSRNOG00000015140	Trmt13	64	89.338	Rattus_norvegicus
ENSOPRG00000012048	TRMT13	67	90.809	ENSRBIG00000037686	TRMT13	100	88.073	Rhinopithecus_bieti
ENSOPRG00000012048	TRMT13	67	90.809	ENSRROG00000044057	TRMT13	100	88.073	Rhinopithecus_roxellana
ENSOPRG00000012048	TRMT13	53	32.063	YOL125W	-	62	32.063	Saccharomyces_cerevisiae
ENSOPRG00000012048	TRMT13	67	90.809	ENSSBOG00000026541	TRMT13	100	88.073	Saimiri_boliviensis_boliviensis
ENSOPRG00000012048	TRMT13	57	82.895	ENSSHAG00000005213	TRMT13	61	82.895	Sarcophilus_harrisii
ENSOPRG00000012048	TRMT13	64	61.654	ENSSFOG00015017560	trmt13	68	61.654	Scleropages_formosus
ENSOPRG00000012048	TRMT13	54	58.113	ENSSMAG00000014592	trmt13	55	58.113	Scophthalmus_maximus
ENSOPRG00000012048	TRMT13	54	56.391	ENSSDUG00000015508	trmt13	65	56.716	Seriola_dumerili
ENSOPRG00000012048	TRMT13	54	56.716	ENSSLDG00000019060	trmt13	55	56.716	Seriola_lalandi_dorsalis
ENSOPRG00000012048	TRMT13	65	82.222	ENSSARG00000010344	TRMT13	65	82.222	Sorex_araneus
ENSOPRG00000012048	TRMT13	62	72.727	ENSSPUG00000016339	TRMT13	64	72.727	Sphenodon_punctatus
ENSOPRG00000012048	TRMT13	53	58.397	ENSSPAG00000011922	trmt13	56	58.397	Stegastes_partitus
ENSOPRG00000012048	TRMT13	67	89.338	ENSSSCG00000006869	TRMT13	67	89.338	Sus_scrofa
ENSOPRG00000012048	TRMT13	62	75.000	ENSTGUG00000005253	TRMT13	65	75.000	Taeniopygia_guttata
ENSOPRG00000012048	TRMT13	55	55.970	ENSTRUG00000008400	trmt13	58	55.970	Takifugu_rubripes
ENSOPRG00000012048	TRMT13	67	86.000	ENSUAMG00000017251	TRMT13	66	86.000	Ursus_americanus
ENSOPRG00000012048	TRMT13	67	89.338	ENSUMAG00000007901	TRMT13	67	89.338	Ursus_maritimus
ENSOPRG00000012048	TRMT13	57	81.633	ENSVPAG00000001034	TRMT13	63	81.633	Vicugna_pacos
ENSOPRG00000012048	TRMT13	67	90.842	ENSVVUG00000021996	TRMT13	85	79.608	Vulpes_vulpes
ENSOPRG00000012048	TRMT13	63	72.500	ENSXETG00000013204	trmt13	65	72.500	Xenopus_tropicalis
ENSOPRG00000012048	TRMT13	54	53.704	ENSXMAG00000010765	trmt13	60	53.704	Xiphophorus_maculatus