EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000012054 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 204504 bases
Position: chrGeneScaffold_743:234989-439492
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000011016	Ago_hook	PF10427.9	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000012070	TNRC6B-201	5274	-	ENSOPRP00000011016	1757 (aa)	-	UPI00017A2951

Gene Model

Click here to download ENSOPRG00000012054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000012054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000012054	TNRC6B	53	50.362	ENSOPRG00000005819	TNRC6A	77	50.388

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000012054	TNRC6B	88	94.693	ENSG00000100354	TNRC6B	99	91.029	Homo_sapiens
ENSOPRG00000012054	TNRC6B	88	90.393	ENSAMEG00000011025	TNRC6B	90	90.756	Ailuropoda_melanoleuca
ENSOPRG00000012054	TNRC6B	86	87.129	ENSAPLG00000009347	TNRC6B	89	87.129	Anas_platyrhynchos
ENSOPRG00000012054	TNRC6B	84	78.936	ENSACAG00000007281	TNRC6B	87	76.453	Anolis_carolinensis
ENSOPRG00000012054	TNRC6B	88	94.390	ENSANAG00000035042	TNRC6B	99	90.789	Aotus_nancymaae
ENSOPRG00000012054	TNRC6B	88	92.744	ENSBTAG00000021076	TNRC6B	90	92.517	Bos_taurus
ENSOPRG00000012054	TNRC6B	86	93.532	ENSCJAG00000002732	TNRC6B	99	90.442	Callithrix_jacchus
ENSOPRG00000012054	TNRC6B	88	94.175	ENSCAFG00000001255	TNRC6B	90	93.949	Canis_familiaris
ENSOPRG00000012054	TNRC6B	86	93.532	ENSCAFG00020002189	TNRC6B	90	93.532	Canis_lupus_dingo
ENSOPRG00000012054	TNRC6B	88	89.600	ENSCHIG00000003491	TNRC6B	89	92.574	Capra_hircus
ENSOPRG00000012054	TNRC6B	88	94.153	ENSTSYG00000011836	TNRC6B	99	90.887	Carlito_syrichta
ENSOPRG00000012054	TNRC6B	88	93.353	ENSCPOG00000005705	TNRC6B	91	93.278	Cavia_porcellus
ENSOPRG00000012054	TNRC6B	86	93.532	ENSCCAG00000019912	TNRC6B	99	88.144	Cebus_capucinus
ENSOPRG00000012054	TNRC6B	86	93.532	ENSCATG00000029291	TNRC6B	99	90.060	Cercocebus_atys
ENSOPRG00000012054	TNRC6B	88	91.703	ENSCLAG00000016942	TNRC6B	91	86.594	Chinchilla_lanigera
ENSOPRG00000012054	TNRC6B	88	90.830	ENSCSAG00000006021	TNRC6B	90	90.830	Chlorocebus_sabaeus
ENSOPRG00000012054	TNRC6B	80	83.320	ENSCPBG00000022932	TNRC6B	90	83.178	Chrysemys_picta_bellii
ENSOPRG00000012054	TNRC6B	88	94.992	ENSCANG00000030776	TNRC6B	99	90.898	Colobus_angolensis_palliatus
ENSOPRG00000012054	TNRC6B	87	88.541	ENSCGRG00001020166	Tnrc6b	90	84.844	Cricetulus_griseus_chok1gshd
ENSOPRG00000012054	TNRC6B	88	92.174	ENSCGRG00000016696	Tnrc6b	90	92.174	Cricetulus_griseus_crigri
ENSOPRG00000012054	TNRC6B	88	90.379	ENSDNOG00000012744	TNRC6B	90	89.520	Dasypus_novemcinctus
ENSOPRG00000012054	TNRC6B	88	92.140	ENSDORG00000003386	Tnrc6b	91	86.483	Dipodomys_ordii
ENSOPRG00000012054	TNRC6B	88	87.719	ENSETEG00000006570	TNRC6B	90	87.719	Echinops_telfairi
ENSOPRG00000012054	TNRC6B	88	94.100	ENSEASG00005005306	TNRC6B	89	93.873	Equus_asinus_asinus
ENSOPRG00000012054	TNRC6B	83	97.500	ENSECAG00000009759	TNRC6B	89	97.500	Equus_caballus
ENSOPRG00000012054	TNRC6B	57	95.971	ENSEEUG00000008690	-	58	95.971	Erinaceus_europaeus
ENSOPRG00000012054	TNRC6B	88	90.830	ENSFCAG00000004791	TNRC6B	91	91.176	Felis_catus
ENSOPRG00000012054	TNRC6B	83	83.226	ENSFALG00000012195	TNRC6B	90	83.226	Ficedula_albicollis
ENSOPRG00000012054	TNRC6B	88	90.830	ENSFDAG00000021368	TNRC6B	91	86.430	Fukomys_damarensis
ENSOPRG00000012054	TNRC6B	88	84.348	ENSGALG00000012050	TNRC6B	88	84.348	Gallus_gallus
ENSOPRG00000012054	TNRC6B	88	83.478	ENSGAGG00000025188	TNRC6B	89	83.478	Gopherus_agassizii
ENSOPRG00000012054	TNRC6B	88	94.617	ENSGGOG00000008444	TNRC6B	99	91.029	Gorilla_gorilla
ENSOPRG00000012054	TNRC6B	86	94.527	ENSHGLG00000009306	TNRC6B	91	94.527	Heterocephalus_glaber_female
ENSOPRG00000012054	TNRC6B	88	91.266	ENSHGLG00100018108	TNRC6B	89	91.266	Heterocephalus_glaber_male
ENSOPRG00000012054	TNRC6B	60	57.692	ENSIPUG00000001515	tnrc6b	70	51.678	Ictalurus_punctatus
ENSOPRG00000012054	TNRC6B	88	91.703	ENSSTOG00000008927	TNRC6B	91	86.846	Ictidomys_tridecemlineatus
ENSOPRG00000012054	TNRC6B	88	91.266	ENSJJAG00000015779	Tnrc6b	91	85.196	Jaculus_jaculus
ENSOPRG00000012054	TNRC6B	62	67.213	ENSLACG00000000628	-	61	66.383	Latimeria_chalumnae
ENSOPRG00000012054	TNRC6B	75	90.212	ENSLAFG00000014473	TNRC6B	98	92.668	Loxodonta_africana
ENSOPRG00000012054	TNRC6B	86	93.532	ENSMFAG00000003862	TNRC6B	99	89.940	Macaca_fascicularis
ENSOPRG00000012054	TNRC6B	88	95.068	ENSMMUG00000021345	TNRC6B	99	91.018	Macaca_mulatta
ENSOPRG00000012054	TNRC6B	88	94.992	ENSMNEG00000042745	TNRC6B	90	94.992	Macaca_nemestrina
ENSOPRG00000012054	TNRC6B	88	95.068	ENSMLEG00000041780	TNRC6B	99	91.018	Mandrillus_leucophaeus
ENSOPRG00000012054	TNRC6B	88	84.937	ENSMGAG00000012333	TNRC6B	90	84.348	Meleagris_gallopavo
ENSOPRG00000012054	TNRC6B	90	88.081	ENSMAUG00000016123	Tnrc6b	91	85.000	Mesocricetus_auratus
ENSOPRG00000012054	TNRC6B	88	94.247	ENSMICG00000014056	TNRC6B	99	91.289	Microcebus_murinus
ENSOPRG00000012054	TNRC6B	88	90.830	ENSMOCG00000020334	Tnrc6b	90	94.000	Microtus_ochrogaster
ENSOPRG00000012054	TNRC6B	88	90.870	MGP_CAROLIEiJ_G0020043	Tnrc6b	91	85.279	Mus_caroli
ENSOPRG00000012054	TNRC6B	88	90.870	ENSMUSG00000047888	Tnrc6b	99	92.642	Mus_musculus
ENSOPRG00000012054	TNRC6B	88	91.266	MGP_PahariEiJ_G0020045	Tnrc6b	91	85.341	Mus_pahari
ENSOPRG00000012054	TNRC6B	88	91.304	MGP_SPRETEiJ_G0020941	Tnrc6b	91	85.569	Mus_spretus
ENSOPRG00000012054	TNRC6B	85	97.137	ENSMPUG00000016442	TNRC6B	90	89.202	Mustela_putorius_furo
ENSOPRG00000012054	TNRC6B	88	91.597	ENSMLUG00000008765	TNRC6B	91	91.597	Myotis_lucifugus
ENSOPRG00000012054	TNRC6B	88	90.393	ENSNGAG00000021294	Tnrc6b	91	85.611	Nannospalax_galili
ENSOPRG00000012054	TNRC6B	77	93.413	ENSNLEG00000015311	TNRC6B	99	91.029	Nomascus_leucogenys
ENSOPRG00000012054	TNRC6B	88	91.266	ENSODEG00000013146	TNRC6B	91	86.387	Octodon_degus
ENSOPRG00000012054	TNRC6B	58	47.030	ENSONIG00000019679	-	59	51.196	Oreochromis_niloticus
ENSOPRG00000012054	TNRC6B	90	91.600	ENSOCUG00000016128	TNRC6B	91	87.974	Oryctolagus_cuniculus
ENSOPRG00000012054	TNRC6B	88	90.870	ENSOGAG00000011096	TNRC6B	90	90.870	Otolemur_garnettii
ENSOPRG00000012054	TNRC6B	88	89.224	ENSOARG00000017238	TNRC6B	91	87.762	Ovis_aries
ENSOPRG00000012054	TNRC6B	88	94.617	ENSPPAG00000028514	TNRC6B	99	90.909	Pan_paniscus
ENSOPRG00000012054	TNRC6B	88	94.011	ENSPPRG00000017741	TNRC6B	99	90.550	Panthera_pardus
ENSOPRG00000012054	TNRC6B	86	93.532	ENSPTIG00000022064	TNRC6B	94	90.000	Panthera_tigris_altaica
ENSOPRG00000012054	TNRC6B	88	94.537	ENSPTRG00000047826	TNRC6B	99	91.018	Pan_troglodytes
ENSOPRG00000012054	TNRC6B	86	93.035	ENSPANG00000009271	TNRC6B	98	96.429	Papio_anubis
ENSOPRG00000012054	TNRC6B	88	84.348	ENSPSIG00000005318	TNRC6B	90	84.348	Pelodiscus_sinensis
ENSOPRG00000012054	TNRC6B	88	91.304	ENSPEMG00000011403	Tnrc6b	91	85.022	Peromyscus_maniculatus_bairdii
ENSOPRG00000012054	TNRC6B	87	83.152	ENSPCIG00000020347	TNRC6B	90	82.629	Phascolarctos_cinereus
ENSOPRG00000012054	TNRC6B	78	53.226	ENSPFOG00000006033	-	65	51.449	Poecilia_formosa
ENSOPRG00000012054	TNRC6B	56	53.205	ENSPLAG00000001418	-	78	49.704	Poecilia_latipinna
ENSOPRG00000012054	TNRC6B	70	56.376	ENSPMEG00000006371	-	77	56.429	Poecilia_mexicana
ENSOPRG00000012054	TNRC6B	88	94.541	ENSPPYG00000011849	TNRC6B	90	94.314	Pongo_abelii
ENSOPRG00000012054	TNRC6B	64	91.045	ENSPCAG00000008739	TNRC6B	65	91.045	Procavia_capensis
ENSOPRG00000012054	TNRC6B	88	94.398	ENSPCOG00000020790	TNRC6B	99	91.527	Propithecus_coquereli
ENSOPRG00000012054	TNRC6B	80	92.857	ENSPVAG00000004975	TNRC6B	84	92.857	Pteropus_vampyrus
ENSOPRG00000012054	TNRC6B	56	66.667	ENSPNAG00000011713	tnrc6b	62	49.017	Pygocentrus_nattereri
ENSOPRG00000012054	TNRC6B	88	91.703	ENSRNOG00000024907	Tnrc6b	91	84.161	Rattus_norvegicus
ENSOPRG00000012054	TNRC6B	88	94.992	ENSRBIG00000035576	TNRC6B	96	92.143	Rhinopithecus_bieti
ENSOPRG00000012054	TNRC6B	87	94.461	ENSRROG00000031135	TNRC6B	99	90.898	Rhinopithecus_roxellana
ENSOPRG00000012054	TNRC6B	87	94.394	ENSSBOG00000029743	TNRC6B	94	97.321	Saimiri_boliviensis_boliviensis
ENSOPRG00000012054	TNRC6B	88	84.581	ENSSHAG00000009692	TNRC6B	91	84.716	Sarcophilus_harrisii
ENSOPRG00000012054	TNRC6B	70	85.470	ENSSARG00000007971	-	73	85.470	Sorex_araneus
ENSOPRG00000012054	TNRC6B	80	81.609	ENSSPUG00000010801	TNRC6B	90	81.609	Sphenodon_punctatus
ENSOPRG00000012054	TNRC6B	88	90.393	ENSSSCG00000000078	TNRC6B	90	90.393	Sus_scrofa
ENSOPRG00000012054	TNRC6B	80	86.401	ENSTGUG00000010138	-	87	86.153	Taeniopygia_guttata
ENSOPRG00000012054	TNRC6B	88	91.199	ENSTTRG00000011465	TNRC6B	91	90.819	Tursiops_truncatus
ENSOPRG00000012054	TNRC6B	88	94.318	ENSUAMG00000007174	TNRC6B	88	94.091	Ursus_americanus
ENSOPRG00000012054	TNRC6B	87	90.605	ENSUMAG00000014336	TNRC6B	90	91.558	Ursus_maritimus
ENSOPRG00000012054	TNRC6B	54	86.802	ENSVPAG00000001467	TNRC6B	64	87.120	Vicugna_pacos
ENSOPRG00000012054	TNRC6B	88	94.175	ENSVVUG00000007064	TNRC6B	91	93.949	Vulpes_vulpes