EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000012092 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 78859 bases
Position: chrGeneScaffold_3200:214796-293654
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000011037	RTC	PF01137.21	8.4e-40	1	1
ENSOPRP00000011037	RTC_insert	PF05189.13	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000012093	RTCA-201	1131	-	ENSOPRP00000011037	376 (aa)	-	UPI0001777715

Gene Model

Click here to download ENSOPRG00000012092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000012092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000012092	RTCA	71	87.361	ENSG00000137996	RTCA	73	87.361	Homo_sapiens
ENSOPRG00000012092	RTCA	71	68.401	ENSAPOG00000001345	rtca	73	68.401	Acanthochromis_polyacanthus
ENSOPRG00000012092	RTCA	71	88.104	ENSAMEG00000008855	RTCA	100	88.104	Ailuropoda_melanoleuca
ENSOPRG00000012092	RTCA	71	68.519	ENSACIG00000019643	rtca	73	68.519	Amphilophus_citrinellus
ENSOPRG00000012092	RTCA	71	68.401	ENSAOCG00000014979	rtca	73	68.401	Amphiprion_ocellaris
ENSOPRG00000012092	RTCA	71	68.401	ENSAPEG00000006945	rtca	73	68.401	Amphiprion_percula
ENSOPRG00000012092	RTCA	71	67.658	ENSATEG00000006315	rtca	74	67.658	Anabas_testudineus
ENSOPRG00000012092	RTCA	71	77.695	ENSAPLG00000015430	RTCA	76	77.695	Anas_platyrhynchos
ENSOPRG00000012092	RTCA	71	87.361	ENSANAG00000025446	RTCA	73	87.361	Aotus_nancymaae
ENSOPRG00000012092	RTCA	71	67.407	ENSACLG00000020770	rtca	73	67.407	Astatotilapia_calliptera
ENSOPRG00000012092	RTCA	71	68.773	ENSAMXG00000043271	rtca	73	68.773	Astyanax_mexicanus
ENSOPRG00000012092	RTCA	71	89.591	ENSBTAG00000006321	RTCA	73	89.591	Bos_taurus
ENSOPRG00000012092	RTCA	71	87.361	ENSCJAG00000003398	RTCA	73	87.361	Callithrix_jacchus
ENSOPRG00000012092	RTCA	71	88.476	ENSCAFG00000020010	RTCA	50	88.476	Canis_familiaris
ENSOPRG00000012092	RTCA	71	89.219	ENSCHIG00000018937	RTCA	73	89.219	Capra_hircus
ENSOPRG00000012092	RTCA	71	88.104	ENSTSYG00000011305	RTCA	73	88.104	Carlito_syrichta
ENSOPRG00000012092	RTCA	71	86.989	ENSCCAG00000021844	RTCA	73	86.989	Cebus_capucinus
ENSOPRG00000012092	RTCA	71	88.104	ENSCATG00000019364	RTCA	87	88.104	Cercocebus_atys
ENSOPRG00000012092	RTCA	71	88.848	ENSCLAG00000006125	RTCA	85	88.848	Chinchilla_lanigera
ENSOPRG00000012092	RTCA	71	88.104	ENSCSAG00000001509	RTCA	73	88.104	Chlorocebus_sabaeus
ENSOPRG00000012092	RTCA	71	87.732	ENSCHOG00000005211	RTCA	73	87.732	Choloepus_hoffmanni
ENSOPRG00000012092	RTCA	71	79.926	ENSCPBG00000026658	RTCA	73	79.926	Chrysemys_picta_bellii
ENSOPRG00000012092	RTCA	71	53.160	ENSCING00000007875	-	73	53.160	Ciona_intestinalis
ENSOPRG00000012092	RTCA	71	52.416	ENSCSAVG00000007269	-	73	52.416	Ciona_savignyi
ENSOPRG00000012092	RTCA	71	87.732	ENSCANG00000040106	RTCA	73	87.732	Colobus_angolensis_palliatus
ENSOPRG00000012092	RTCA	71	87.732	ENSCGRG00001013163	Rtca	85	87.732	Cricetulus_griseus_chok1gshd
ENSOPRG00000012092	RTCA	71	66.914	ENSCSEG00000000530	rtca	71	66.914	Cynoglossus_semilaevis
ENSOPRG00000012092	RTCA	60	71.053	ENSCVAG00000021809	rtca	66	71.053	Cyprinodon_variegatus
ENSOPRG00000012092	RTCA	71	68.773	ENSDARG00000002215	rtca	73	68.773	Danio_rerio
ENSOPRG00000012092	RTCA	71	87.361	ENSDNOG00000000456	RTCA	73	87.361	Dasypus_novemcinctus
ENSOPRG00000012092	RTCA	71	88.104	ENSDORG00000005448	Rtca	73	88.104	Dipodomys_ordii
ENSOPRG00000012092	RTCA	70	33.083	FBgn0025630	Rtca	72	33.083	Drosophila_melanogaster
ENSOPRG00000012092	RTCA	66	48.425	ENSEBUG00000008556	rtca	66	48.425	Eptatretus_burgeri
ENSOPRG00000012092	RTCA	71	88.476	ENSEASG00005015926	RTCA	73	88.476	Equus_asinus_asinus
ENSOPRG00000012092	RTCA	71	88.476	ENSECAG00000019831	RTCA	73	88.476	Equus_caballus
ENSOPRG00000012092	RTCA	62	78.390	ENSEEUG00000001165	RTCA	68	78.390	Erinaceus_europaeus
ENSOPRG00000012092	RTCA	71	67.658	ENSELUG00000003741	rtca	74	67.658	Esox_lucius
ENSOPRG00000012092	RTCA	71	89.591	ENSFCAG00000024460	RTCA	73	89.591	Felis_catus
ENSOPRG00000012092	RTCA	64	76.543	ENSFALG00000002443	RTCA	65	76.543	Ficedula_albicollis
ENSOPRG00000012092	RTCA	69	69.582	ENSFDAG00000016084	-	71	69.582	Fukomys_damarensis
ENSOPRG00000012092	RTCA	71	87.732	ENSFDAG00000012070	-	73	87.732	Fukomys_damarensis
ENSOPRG00000012092	RTCA	57	64.651	ENSFHEG00000002868	rtca	90	64.762	Fundulus_heteroclitus
ENSOPRG00000012092	RTCA	71	67.286	ENSGMOG00000013264	rtca	73	67.286	Gadus_morhua
ENSOPRG00000012092	RTCA	71	77.695	ENSGALG00000005277	RTCA	73	77.695	Gallus_gallus
ENSOPRG00000012092	RTCA	71	69.145	ENSGAFG00000011853	rtca	73	69.145	Gambusia_affinis
ENSOPRG00000012092	RTCA	71	65.428	ENSGACG00000013497	rtca	73	65.428	Gasterosteus_aculeatus
ENSOPRG00000012092	RTCA	50	85.185	ENSGAGG00000023306	RTCA	65	85.185	Gopherus_agassizii
ENSOPRG00000012092	RTCA	71	87.361	ENSGGOG00000009546	-	87	87.361	Gorilla_gorilla
ENSOPRG00000012092	RTCA	71	86.245	ENSGGOG00000044018	-	73	86.245	Gorilla_gorilla
ENSOPRG00000012092	RTCA	71	67.407	ENSHBUG00000002114	rtca	73	67.407	Haplochromis_burtoni
ENSOPRG00000012092	RTCA	71	86.989	ENSHGLG00000002617	RTCA	73	86.989	Heterocephalus_glaber_female
ENSOPRG00000012092	RTCA	71	86.989	ENSHGLG00100006056	RTCA	73	86.989	Heterocephalus_glaber_male
ENSOPRG00000012092	RTCA	71	61.710	ENSHCOG00000020628	rtca	65	61.710	Hippocampus_comes
ENSOPRG00000012092	RTCA	71	69.145	ENSIPUG00000024803	rtca	73	69.145	Ictalurus_punctatus
ENSOPRG00000012092	RTCA	71	88.848	ENSSTOG00000013528	-	79	88.848	Ictidomys_tridecemlineatus
ENSOPRG00000012092	RTCA	71	79.182	ENSSTOG00000033099	-	72	79.182	Ictidomys_tridecemlineatus
ENSOPRG00000012092	RTCA	66	59.127	ENSJJAG00000016178	Rtca	73	59.127	Jaculus_jaculus
ENSOPRG00000012092	RTCA	71	69.517	ENSKMAG00000006651	rtca	73	69.517	Kryptolebias_marmoratus
ENSOPRG00000012092	RTCA	71	65.428	ENSLBEG00000002448	-	83	65.428	Labrus_bergylta
ENSOPRG00000012092	RTCA	71	65.428	ENSLBEG00000028971	rtca	74	65.428	Labrus_bergylta
ENSOPRG00000012092	RTCA	71	75.093	ENSLACG00000013666	RTCA	73	75.093	Latimeria_chalumnae
ENSOPRG00000012092	RTCA	71	69.517	ENSLOCG00000000093	rtca	73	69.517	Lepisosteus_oculatus
ENSOPRG00000012092	RTCA	71	86.617	ENSLAFG00000001473	RTCA	73	86.617	Loxodonta_africana
ENSOPRG00000012092	RTCA	71	88.104	ENSMFAG00000034132	RTCA	73	88.104	Macaca_fascicularis
ENSOPRG00000012092	RTCA	71	87.732	ENSMMUG00000019105	RTCA	73	87.732	Macaca_mulatta
ENSOPRG00000012092	RTCA	71	88.104	ENSMNEG00000037163	RTCA	87	88.104	Macaca_nemestrina
ENSOPRG00000012092	RTCA	71	76.952	ENSMLEG00000042151	RTCA	78	76.952	Mandrillus_leucophaeus
ENSOPRG00000012092	RTCA	71	69.888	ENSMAMG00000016536	rtca	73	69.888	Mastacembelus_armatus
ENSOPRG00000012092	RTCA	71	67.407	ENSMZEG00005017945	rtca	73	67.407	Maylandia_zebra
ENSOPRG00000012092	RTCA	71	77.323	ENSMGAG00000006892	RTCA	84	77.323	Meleagris_gallopavo
ENSOPRG00000012092	RTCA	71	87.732	ENSMAUG00000008488	Rtca	73	87.732	Mesocricetus_auratus
ENSOPRG00000012092	RTCA	71	89.219	ENSMICG00000008643	RTCA	87	89.219	Microcebus_murinus
ENSOPRG00000012092	RTCA	71	88.104	ENSMOCG00000016660	Rtca	73	88.104	Microtus_ochrogaster
ENSOPRG00000012092	RTCA	71	68.401	ENSMMOG00000007750	rtca	87	68.401	Mola_mola
ENSOPRG00000012092	RTCA	71	84.387	ENSMODG00000003557	RTCA	73	84.387	Monodelphis_domestica
ENSOPRG00000012092	RTCA	71	69.517	ENSMALG00000020844	rtca	73	69.517	Monopterus_albus
ENSOPRG00000012092	RTCA	71	88.104	MGP_CAROLIEiJ_G0025565	Rtca	100	93.662	Mus_caroli
ENSOPRG00000012092	RTCA	71	87.361	ENSMUSG00000000339	Rtca	100	93.662	Mus_musculus
ENSOPRG00000012092	RTCA	71	87.732	MGP_PahariEiJ_G0027011	Rtca	100	92.958	Mus_pahari
ENSOPRG00000012092	RTCA	71	87.732	MGP_SPRETEiJ_G0026515	Rtca	100	92.958	Mus_spretus
ENSOPRG00000012092	RTCA	71	89.219	ENSMPUG00000012119	RTCA	73	89.219	Mustela_putorius_furo
ENSOPRG00000012092	RTCA	71	84.015	ENSMLUG00000009922	RTCA	73	84.015	Myotis_lucifugus
ENSOPRG00000012092	RTCA	71	86.989	ENSNGAG00000011540	Rtca	78	86.989	Nannospalax_galili
ENSOPRG00000012092	RTCA	71	67.407	ENSNBRG00000003062	rtca	73	67.407	Neolamprologus_brichardi
ENSOPRG00000012092	RTCA	71	87.361	ENSNLEG00000031426	RTCA	73	87.361	Nomascus_leucogenys
ENSOPRG00000012092	RTCA	71	87.361	ENSODEG00000006990	RTCA	74	87.361	Octodon_degus
ENSOPRG00000012092	RTCA	71	67.037	ENSONIG00000007753	rtca	73	67.037	Oreochromis_niloticus
ENSOPRG00000012092	RTCA	71	82.156	ENSOANG00000012055	RTCA	83	82.156	Ornithorhynchus_anatinus
ENSOPRG00000012092	RTCA	71	90.706	ENSOCUG00000014247	RTCA	73	90.706	Oryctolagus_cuniculus
ENSOPRG00000012092	RTCA	71	68.401	ENSORLG00000013605	rtca	73	68.401	Oryzias_latipes
ENSOPRG00000012092	RTCA	71	68.401	ENSORLG00020001904	rtca	73	68.401	Oryzias_latipes_hni
ENSOPRG00000012092	RTCA	71	68.401	ENSORLG00015021064	rtca	73	68.401	Oryzias_latipes_hsok
ENSOPRG00000012092	RTCA	71	69.888	ENSOMEG00000000756	rtca	73	69.888	Oryzias_melastigma
ENSOPRG00000012092	RTCA	71	87.732	ENSOGAG00000005627	RTCA	74	87.732	Otolemur_garnettii
ENSOPRG00000012092	RTCA	71	88.476	ENSOARG00000018122	RTCA	84	88.476	Ovis_aries
ENSOPRG00000012092	RTCA	71	88.104	ENSPPAG00000035119	RTCA	87	88.104	Pan_paniscus
ENSOPRG00000012092	RTCA	71	89.219	ENSPPRG00000000350	RTCA	73	89.219	Panthera_pardus
ENSOPRG00000012092	RTCA	71	89.219	ENSPTIG00000012816	RTCA	73	89.219	Panthera_tigris_altaica
ENSOPRG00000012092	RTCA	71	87.361	ENSPTRG00000001004	RTCA	87	87.361	Pan_troglodytes
ENSOPRG00000012092	RTCA	71	88.476	ENSPANG00000000346	RTCA	73	88.476	Papio_anubis
ENSOPRG00000012092	RTCA	71	69.888	ENSPKIG00000001653	rtca	73	69.888	Paramormyrops_kingsleyae
ENSOPRG00000012092	RTCA	71	79.554	ENSPSIG00000011408	RTCA	73	79.554	Pelodiscus_sinensis
ENSOPRG00000012092	RTCA	71	87.361	ENSPEMG00000018582	Rtca	73	87.361	Peromyscus_maniculatus_bairdii
ENSOPRG00000012092	RTCA	71	52.593	ENSPMAG00000009110	rtca	73	52.593	Petromyzon_marinus
ENSOPRG00000012092	RTCA	71	84.758	ENSPCIG00000007684	RTCA	73	84.758	Phascolarctos_cinereus
ENSOPRG00000012092	RTCA	71	69.888	ENSPFOG00000004824	rtca	73	69.888	Poecilia_formosa
ENSOPRG00000012092	RTCA	71	69.888	ENSPLAG00000011753	rtca	73	69.888	Poecilia_latipinna
ENSOPRG00000012092	RTCA	71	69.888	ENSPMEG00000020469	rtca	73	69.888	Poecilia_mexicana
ENSOPRG00000012092	RTCA	71	71.004	ENSPREG00000001365	rtca	73	71.004	Poecilia_reticulata
ENSOPRG00000012092	RTCA	71	87.361	ENSPPYG00000001115	RTCA	73	87.361	Pongo_abelii
ENSOPRG00000012092	RTCA	71	89.591	ENSPCAG00000005076	RTCA	73	89.591	Procavia_capensis
ENSOPRG00000012092	RTCA	71	88.476	ENSPCOG00000005603	RTCA	73	88.476	Propithecus_coquereli
ENSOPRG00000012092	RTCA	71	87.361	ENSPVAG00000009478	RTCA	71	87.361	Pteropus_vampyrus
ENSOPRG00000012092	RTCA	71	67.407	ENSPNYG00000004722	rtca	73	67.407	Pundamilia_nyererei
ENSOPRG00000012092	RTCA	71	70.260	ENSPNAG00000022270	rtca	73	70.260	Pygocentrus_nattereri
ENSOPRG00000012092	RTCA	71	88.476	ENSRNOG00000014575	Rtca	73	88.476	Rattus_norvegicus
ENSOPRG00000012092	RTCA	71	86.989	ENSRBIG00000041180	RTCA	87	86.989	Rhinopithecus_bieti
ENSOPRG00000012092	RTCA	71	86.989	ENSRROG00000024929	RTCA	73	86.989	Rhinopithecus_roxellana
ENSOPRG00000012092	RTCA	71	87.361	ENSSBOG00000028626	RTCA	73	87.361	Saimiri_boliviensis_boliviensis
ENSOPRG00000012092	RTCA	71	85.502	ENSSHAG00000001758	RTCA	73	85.502	Sarcophilus_harrisii
ENSOPRG00000012092	RTCA	71	66.543	ENSSMAG00000014680	rtca	72	66.543	Scophthalmus_maximus
ENSOPRG00000012092	RTCA	71	68.030	ENSSDUG00000015585	rtca	72	68.030	Seriola_dumerili
ENSOPRG00000012092	RTCA	71	67.658	ENSSLDG00000018985	rtca	73	67.658	Seriola_lalandi_dorsalis
ENSOPRG00000012092	RTCA	71	80.669	ENSSARG00000013993	RTCA	85	80.669	Sorex_araneus
ENSOPRG00000012092	RTCA	71	67.286	ENSSPAG00000011938	rtca	73	67.286	Stegastes_partitus
ENSOPRG00000012092	RTCA	71	90.706	ENSSSCG00000006865	RTCA	73	90.706	Sus_scrofa
ENSOPRG00000012092	RTCA	71	78.067	ENSTGUG00000005154	RTCA	73	78.067	Taeniopygia_guttata
ENSOPRG00000012092	RTCA	71	67.658	ENSTRUG00000008799	rtca	73	67.658	Takifugu_rubripes
ENSOPRG00000012092	RTCA	71	68.030	ENSTNIG00000004725	rtca	73	68.030	Tetraodon_nigroviridis
ENSOPRG00000012092	RTCA	71	89.219	ENSTTRG00000015327	RTCA	71	89.219	Tursiops_truncatus
ENSOPRG00000012092	RTCA	65	85.366	ENSUAMG00000017265	RTCA	69	85.366	Ursus_americanus
ENSOPRG00000012092	RTCA	71	87.732	ENSUMAG00000007881	RTCA	73	87.732	Ursus_maritimus
ENSOPRG00000012092	RTCA	71	87.732	ENSVPAG00000001039	RTCA	71	87.732	Vicugna_pacos
ENSOPRG00000012092	RTCA	71	88.104	ENSVVUG00000022041	RTCA	50	88.104	Vulpes_vulpes
ENSOPRG00000012092	RTCA	70	58.519	ENSXETG00000031661	RTCA	73	58.519	Xenopus_tropicalis
ENSOPRG00000012092	RTCA	71	61.423	ENSXCOG00000008002	rtca	72	61.423	Xiphophorus_couchianus
ENSOPRG00000012092	RTCA	71	69.517	ENSXMAG00000005482	rtca	73	69.517	Xiphophorus_maculatus