EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000012513 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 5175 bases
Position: chrGeneScaffold_1756:186380-191554
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000011421	tRNA_int_end_N2	PF12928.7	3.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000012510	TSEN54-201	1545	-	ENSOPRP00000011421	514 (aa)	-	UPI0001777E87

Gene Model

Click here to download ENSOPRG00000012513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000012513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000012513	TSEN54	100	75.901	ENSG00000182173	TSEN54	100	75.901	Homo_sapiens
ENSOPRG00000012513	TSEN54	96	42.857	ENSAPOG00000009659	tsen54	99	40.141	Acanthochromis_polyacanthus
ENSOPRG00000012513	TSEN54	99	74.667	ENSAMEG00000009414	TSEN54	99	74.667	Ailuropoda_melanoleuca
ENSOPRG00000012513	TSEN54	99	42.667	ENSAOCG00000000152	tsen54	97	42.667	Amphiprion_ocellaris
ENSOPRG00000012513	TSEN54	99	42.286	ENSAPEG00000018931	tsen54	97	42.286	Amphiprion_percula
ENSOPRG00000012513	TSEN54	96	40.076	ENSATEG00000019860	tsen54	97	40.341	Anabas_testudineus
ENSOPRG00000012513	TSEN54	85	49.345	ENSAPLG00000009419	TSEN54	100	49.345	Anas_platyrhynchos
ENSOPRG00000012513	TSEN54	97	48.343	ENSACAG00000006714	TSEN54	98	48.733	Anolis_carolinensis
ENSOPRG00000012513	TSEN54	98	77.071	ENSANAG00000024061	TSEN54	99	76.616	Aotus_nancymaae
ENSOPRG00000012513	TSEN54	96	42.270	ENSACLG00000019800	tsen54	96	42.913	Astatotilapia_calliptera
ENSOPRG00000012513	TSEN54	96	43.800	ENSAMXG00000006546	tsen54	96	43.800	Astyanax_mexicanus
ENSOPRG00000012513	TSEN54	100	73.684	ENSBTAG00000000824	TSEN54	100	73.684	Bos_taurus
ENSOPRG00000012513	TSEN54	98	76.879	ENSCJAG00000014278	TSEN54	99	76.426	Callithrix_jacchus
ENSOPRG00000012513	TSEN54	100	75.564	ENSCAFG00000004798	TSEN54	100	75.564	Canis_familiaris
ENSOPRG00000012513	TSEN54	100	75.564	ENSCAFG00020000312	TSEN54	100	75.564	Canis_lupus_dingo
ENSOPRG00000012513	TSEN54	100	73.423	ENSCHIG00000019908	TSEN54	100	73.423	Capra_hircus
ENSOPRG00000012513	TSEN54	85	73.626	ENSTSYG00000037439	TSEN54	100	73.626	Carlito_syrichta
ENSOPRG00000012513	TSEN54	98	77.457	ENSCCAG00000036624	TSEN54	99	76.996	Cebus_capucinus
ENSOPRG00000012513	TSEN54	97	77.148	ENSCATG00000042877	TSEN54	99	76.996	Cercocebus_atys
ENSOPRG00000012513	TSEN54	97	75.781	ENSCLAG00000002924	TSEN54	100	75.379	Chinchilla_lanigera
ENSOPRG00000012513	TSEN54	100	76.281	ENSCSAG00000004809	TSEN54	100	76.281	Chlorocebus_sabaeus
ENSOPRG00000012513	TSEN54	99	50.654	ENSCPBG00000028071	TSEN54	99	50.654	Chrysemys_picta_bellii
ENSOPRG00000012513	TSEN54	100	76.471	ENSCANG00000028053	TSEN54	100	76.471	Colobus_angolensis_palliatus
ENSOPRG00000012513	TSEN54	100	73.624	ENSCGRG00001020029	Tsen54	100	73.624	Cricetulus_griseus_chok1gshd
ENSOPRG00000012513	TSEN54	84	71.558	ENSCGRG00000016289	Tsen54	100	71.558	Cricetulus_griseus_crigri
ENSOPRG00000012513	TSEN54	80	35.349	ENSCSEG00000020586	tsen54	99	35.349	Cynoglossus_semilaevis
ENSOPRG00000012513	TSEN54	80	42.233	ENSDARG00000036844	tsen54	99	42.233	Danio_rerio
ENSOPRG00000012513	TSEN54	100	73.308	ENSDNOG00000018452	TSEN54	100	73.308	Dasypus_novemcinctus
ENSOPRG00000012513	TSEN54	100	74.953	ENSDORG00000004073	Tsen54	100	74.953	Dipodomys_ordii
ENSOPRG00000012513	TSEN54	66	68.519	ENSEBUG00000005203	TSEN54	62	68.519	Eptatretus_burgeri
ENSOPRG00000012513	TSEN54	100	74.624	ENSEASG00005000579	TSEN54	100	74.624	Equus_asinus_asinus
ENSOPRG00000012513	TSEN54	100	74.812	ENSECAG00000004924	TSEN54	100	74.812	Equus_caballus
ENSOPRG00000012513	TSEN54	85	69.803	ENSEEUG00000008467	TSEN54	100	69.803	Erinaceus_europaeus
ENSOPRG00000012513	TSEN54	97	41.288	ENSELUG00000017703	tsen54	90	41.288	Esox_lucius
ENSOPRG00000012513	TSEN54	100	73.872	ENSFCAG00000023712	TSEN54	100	73.872	Felis_catus
ENSOPRG00000012513	TSEN54	93	50.000	ENSFALG00000001119	TSEN54	94	50.101	Ficedula_albicollis
ENSOPRG00000012513	TSEN54	85	72.829	ENSFDAG00000019090	TSEN54	99	72.829	Fukomys_damarensis
ENSOPRG00000012513	TSEN54	96	45.110	ENSFHEG00000005470	tsen54	96	45.110	Fundulus_heteroclitus
ENSOPRG00000012513	TSEN54	87	41.631	ENSGMOG00000013146	tsen54	99	41.631	Gadus_morhua
ENSOPRG00000012513	TSEN54	93	46.521	ENSGALG00000047163	TSEN54	97	46.521	Gallus_gallus
ENSOPRG00000012513	TSEN54	96	43.936	ENSGAFG00000005111	tsen54	96	44.181	Gambusia_affinis
ENSOPRG00000012513	TSEN54	96	43.513	ENSGACG00000014987	tsen54	99	43.426	Gasterosteus_aculeatus
ENSOPRG00000012513	TSEN54	97	52.008	ENSGAGG00000006825	TSEN54	97	52.008	Gopherus_agassizii
ENSOPRG00000012513	TSEN54	96	75.984	ENSGGOG00000009417	TSEN54	100	75.984	Gorilla_gorilla
ENSOPRG00000012513	TSEN54	87	40.749	ENSHBUG00000018296	tsen54	99	34.699	Haplochromis_burtoni
ENSOPRG00000012513	TSEN54	100	75.522	ENSHGLG00000007979	TSEN54	100	75.522	Heterocephalus_glaber_female
ENSOPRG00000012513	TSEN54	100	74.573	ENSHGLG00100005497	TSEN54	100	74.573	Heterocephalus_glaber_male
ENSOPRG00000012513	TSEN54	80	37.530	ENSHCOG00000007481	tsen54	99	37.530	Hippocampus_comes
ENSOPRG00000012513	TSEN54	72	56.429	ENSIPUG00000000590	tsen54	73	56.429	Ictalurus_punctatus
ENSOPRG00000012513	TSEN54	100	71.917	ENSSTOG00000012883	TSEN54	100	71.917	Ictidomys_tridecemlineatus
ENSOPRG00000012513	TSEN54	100	74.480	ENSJJAG00000007365	Tsen54	100	74.480	Jaculus_jaculus
ENSOPRG00000012513	TSEN54	99	41.760	ENSKMAG00000006944	tsen54	99	41.760	Kryptolebias_marmoratus
ENSOPRG00000012513	TSEN54	96	40.883	ENSLBEG00000004199	tsen54	97	41.300	Labrus_bergylta
ENSOPRG00000012513	TSEN54	96	42.885	ENSLACG00000009497	TSEN54	100	42.885	Latimeria_chalumnae
ENSOPRG00000012513	TSEN54	99	43.233	ENSLOCG00000011191	tsen54	99	43.233	Lepisosteus_oculatus
ENSOPRG00000012513	TSEN54	100	69.245	ENSLAFG00000011655	TSEN54	100	69.245	Loxodonta_africana
ENSOPRG00000012513	TSEN54	100	76.471	ENSMFAG00000000712	TSEN54	100	76.471	Macaca_fascicularis
ENSOPRG00000012513	TSEN54	100	76.281	ENSMNEG00000029199	TSEN54	100	76.281	Macaca_nemestrina
ENSOPRG00000012513	TSEN54	85	74.779	ENSMLEG00000044168	TSEN54	88	74.779	Mandrillus_leucophaeus
ENSOPRG00000012513	TSEN54	97	40.927	ENSMAMG00000019773	tsen54	98	41.440	Mastacembelus_armatus
ENSOPRG00000012513	TSEN54	96	42.270	ENSMZEG00005000884	tsen54	96	42.829	Maylandia_zebra
ENSOPRG00000012513	TSEN54	96	46.332	ENSMGAG00000009556	TSEN54	97	47.490	Meleagris_gallopavo
ENSOPRG00000012513	TSEN54	100	73.574	ENSMAUG00000016838	Tsen54	100	73.574	Mesocricetus_auratus
ENSOPRG00000012513	TSEN54	100	75.432	ENSMICG00000044012	TSEN54	100	75.432	Microcebus_murinus
ENSOPRG00000012513	TSEN54	100	74.335	ENSMOCG00000021585	Tsen54	100	74.335	Microtus_ochrogaster
ENSOPRG00000012513	TSEN54	95	38.277	ENSMMOG00000020189	tsen54	98	39.078	Mola_mola
ENSOPRG00000012513	TSEN54	98	59.774	ENSMODG00000007438	TSEN54	98	59.594	Monodelphis_domestica
ENSOPRG00000012513	TSEN54	96	42.074	ENSMALG00000020573	tsen54	97	41.910	Monopterus_albus
ENSOPRG00000012513	TSEN54	100	72.865	MGP_CAROLIEiJ_G0017417	Tsen54	100	72.865	Mus_caroli
ENSOPRG00000012513	TSEN54	100	73.055	ENSMUSG00000020781	Tsen54	100	73.055	Mus_musculus
ENSOPRG00000012513	TSEN54	100	73.245	MGP_PahariEiJ_G0018547	Tsen54	100	73.245	Mus_pahari
ENSOPRG00000012513	TSEN54	100	72.865	MGP_SPRETEiJ_G0018262	Tsen54	100	72.865	Mus_spretus
ENSOPRG00000012513	TSEN54	100	74.436	ENSMPUG00000013870	TSEN54	100	74.436	Mustela_putorius_furo
ENSOPRG00000012513	TSEN54	100	72.264	ENSMLUG00000015298	TSEN54	100	72.264	Myotis_lucifugus
ENSOPRG00000012513	TSEN54	100	73.755	ENSNGAG00000015673	Tsen54	100	73.755	Nannospalax_galili
ENSOPRG00000012513	TSEN54	88	67.308	ENSMEUG00000011908	TSEN54	100	67.308	Notamacropus_eugenii
ENSOPRG00000012513	TSEN54	96	43.080	ENSONIG00000009543	tsen54	96	43.080	Oreochromis_niloticus
ENSOPRG00000012513	TSEN54	99	71.348	ENSOCUG00000009875	TSEN54	99	71.348	Oryctolagus_cuniculus
ENSOPRG00000012513	TSEN54	96	44.064	ENSORLG00000000852	tsen54	97	44.064	Oryzias_latipes
ENSOPRG00000012513	TSEN54	96	44.266	ENSORLG00020018221	tsen54	97	44.266	Oryzias_latipes_hni
ENSOPRG00000012513	TSEN54	96	44.088	ENSORLG00015009413	tsen54	98	44.088	Oryzias_latipes_hsok
ENSOPRG00000012513	TSEN54	96	44.223	ENSOMEG00000014402	tsen54	94	44.223	Oryzias_melastigma
ENSOPRG00000012513	TSEN54	100	71.834	ENSOGAG00000001442	TSEN54	100	71.834	Otolemur_garnettii
ENSOPRG00000012513	TSEN54	85	70.460	ENSOARG00000010361	TSEN54	100	70.460	Ovis_aries
ENSOPRG00000012513	TSEN54	94	75.000	ENSPPAG00000043519	TSEN54	99	75.202	Pan_paniscus
ENSOPRG00000012513	TSEN54	100	74.248	ENSPPRG00000009162	TSEN54	100	74.248	Panthera_pardus
ENSOPRG00000012513	TSEN54	85	72.566	ENSPTIG00000019312	TSEN54	96	72.566	Panthera_tigris_altaica
ENSOPRG00000012513	TSEN54	100	75.712	ENSPTRG00000009646	TSEN54	100	75.712	Pan_troglodytes
ENSOPRG00000012513	TSEN54	99	76.426	ENSPANG00000020133	TSEN54	99	76.426	Papio_anubis
ENSOPRG00000012513	TSEN54	97	43.223	ENSPKIG00000023018	tsen54	100	42.361	Paramormyrops_kingsleyae
ENSOPRG00000012513	TSEN54	80	46.404	ENSPSIG00000012807	TSEN54	99	46.404	Pelodiscus_sinensis
ENSOPRG00000012513	TSEN54	70	55.556	ENSPMGG00000019578	tsen54	78	55.556	Periophthalmus_magnuspinnatus
ENSOPRG00000012513	TSEN54	100	74.715	ENSPEMG00000014857	Tsen54	100	74.715	Peromyscus_maniculatus_bairdii
ENSOPRG00000012513	TSEN54	96	44.862	ENSPFOG00000022740	tsen54	96	45.059	Poecilia_formosa
ENSOPRG00000012513	TSEN54	96	45.129	ENSPLAG00000014847	tsen54	96	45.328	Poecilia_latipinna
ENSOPRG00000012513	TSEN54	96	44.930	ENSPMEG00000022876	tsen54	96	45.129	Poecilia_mexicana
ENSOPRG00000012513	TSEN54	99	43.023	ENSPREG00000013090	tsen54	99	43.217	Poecilia_reticulata
ENSOPRG00000012513	TSEN54	91	71.459	ENSPPYG00000008629	TSEN54	100	71.459	Pongo_abelii
ENSOPRG00000012513	TSEN54	95	64.683	ENSPCAG00000002093	TSEN54	99	64.683	Procavia_capensis
ENSOPRG00000012513	TSEN54	100	76.660	ENSPCOG00000027880	TSEN54	100	76.660	Propithecus_coquereli
ENSOPRG00000012513	TSEN54	99	74.340	ENSPVAG00000008446	TSEN54	99	74.340	Pteropus_vampyrus
ENSOPRG00000012513	TSEN54	92	42.387	ENSPNYG00000010217	tsen54	99	43.149	Pundamilia_nyererei
ENSOPRG00000012513	TSEN54	98	43.048	ENSPNAG00000003770	tsen54	98	43.048	Pygocentrus_nattereri
ENSOPRG00000012513	TSEN54	100	72.865	ENSRNOG00000004598	Tsen54	100	72.865	Rattus_norvegicus
ENSOPRG00000012513	TSEN54	100	76.850	ENSRBIG00000043040	TSEN54	100	76.850	Rhinopithecus_bieti
ENSOPRG00000012513	TSEN54	100	76.471	ENSRROG00000030797	TSEN54	100	76.471	Rhinopithecus_roxellana
ENSOPRG00000012513	TSEN54	99	76.616	ENSSBOG00000013543	TSEN54	99	76.616	Saimiri_boliviensis_boliviensis
ENSOPRG00000012513	TSEN54	99	59.665	ENSSHAG00000018127	TSEN54	98	59.665	Sarcophilus_harrisii
ENSOPRG00000012513	TSEN54	80	40.920	ENSSFOG00015004093	tsen54	100	41.452	Scleropages_formosus
ENSOPRG00000012513	TSEN54	97	40.226	ENSSMAG00000012449	tsen54	99	41.412	Scophthalmus_maximus
ENSOPRG00000012513	TSEN54	96	42.636	ENSSDUG00000021506	tsen54	97	42.636	Seriola_dumerili
ENSOPRG00000012513	TSEN54	96	42.636	ENSSLDG00000016303	tsen54	97	42.636	Seriola_lalandi_dorsalis
ENSOPRG00000012513	TSEN54	79	47.541	ENSSPUG00000008988	TSEN54	97	47.552	Sphenodon_punctatus
ENSOPRG00000012513	TSEN54	80	39.173	ENSSPAG00000008047	tsen54	99	39.173	Stegastes_partitus
ENSOPRG00000012513	TSEN54	92	43.096	ENSSPAG00000008098	-	99	43.096	Stegastes_partitus
ENSOPRG00000012513	TSEN54	100	75.376	ENSSSCG00000036852	TSEN54	100	75.376	Sus_scrofa
ENSOPRG00000012513	TSEN54	85	49.119	ENSTGUG00000008548	TSEN54	100	49.119	Taeniopygia_guttata
ENSOPRG00000012513	TSEN54	96	41.750	ENSTRUG00000004230	tsen54	96	41.750	Takifugu_rubripes
ENSOPRG00000012513	TSEN54	95	41.650	ENSTNIG00000011281	tsen54	97	41.851	Tetraodon_nigroviridis
ENSOPRG00000012513	TSEN54	85	74.017	ENSTTRG00000015828	TSEN54	100	74.017	Tursiops_truncatus
ENSOPRG00000012513	TSEN54	80	71.860	ENSUAMG00000010045	TSEN54	100	71.860	Ursus_americanus
ENSOPRG00000012513	TSEN54	83	72.809	ENSUMAG00000008979	TSEN54	100	72.809	Ursus_maritimus
ENSOPRG00000012513	TSEN54	97	75.146	ENSVVUG00000011411	TSEN54	98	75.146	Vulpes_vulpes
ENSOPRG00000012513	TSEN54	99	45.920	ENSXETG00000012532	tsen54	99	67.500	Xenopus_tropicalis
ENSOPRG00000012513	TSEN54	73	56.429	ENSXCOG00000018245	tsen54	82	56.429	Xiphophorus_couchianus
ENSOPRG00000012513	TSEN54	96	44.135	ENSXMAG00000018818	tsen54	96	44.334	Xiphophorus_maculatus