EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000013068 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 63485 bases
Position: chrGeneScaffold_1557:150671-214155
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000011941	zf-CCCH	PF00642.24	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000013087	RC3H1-201	3378	-	ENSOPRP00000011941	1125 (aa)	-	UPI0001777154

Gene Model

Click here to download ENSOPRG00000013068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000013068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000013068	RC3H1	64	48.258	ENSOPRG00000000135	RC3H2	72	48.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000013068	RC3H1	99	83.024	ENSG00000135870	RC3H1	99	82.935	Homo_sapiens
ENSOPRG00000013068	RC3H1	99	82.655	ENSAMEG00000015657	RC3H1	99	82.655	Ailuropoda_melanoleuca
ENSOPRG00000013068	RC3H1	99	75.524	ENSAPLG00000005341	RC3H1	99	75.416	Anas_platyrhynchos
ENSOPRG00000013068	RC3H1	99	73.357	ENSACAG00000015271	RC3H1	99	73.333	Anolis_carolinensis
ENSOPRG00000013068	RC3H1	99	83.201	ENSANAG00000036716	RC3H1	99	83.289	Aotus_nancymaae
ENSOPRG00000013068	RC3H1	99	81.560	ENSBTAG00000052708	RC3H1	99	81.560	Bos_taurus
ENSOPRG00000013068	RC3H1	99	83.112	ENSCJAG00000009106	RC3H1	99	83.201	Callithrix_jacchus
ENSOPRG00000013068	RC3H1	99	82.566	ENSCAFG00000014434	RC3H1	99	82.920	Canis_familiaris
ENSOPRG00000013068	RC3H1	99	82.903	ENSCAFG00020017112	RC3H1	99	83.259	Canis_lupus_dingo
ENSOPRG00000013068	RC3H1	99	81.117	ENSCHIG00000002873	RC3H1	99	81.681	Capra_hircus
ENSOPRG00000013068	RC3H1	99	81.770	ENSTSYG00000003913	RC3H1	99	82.035	Carlito_syrichta
ENSOPRG00000013068	RC3H1	99	78.073	ENSCPOG00000004349	RC3H1	99	78.249	Cavia_porcellus
ENSOPRG00000013068	RC3H1	99	81.521	ENSCCAG00000025652	RC3H1	99	81.609	Cebus_capucinus
ENSOPRG00000013068	RC3H1	99	83.024	ENSCATG00000033497	RC3H1	99	82.935	Cercocebus_atys
ENSOPRG00000013068	RC3H1	99	81.521	ENSCLAG00000011267	RC3H1	99	81.874	Chinchilla_lanigera
ENSOPRG00000013068	RC3H1	96	83.303	ENSCSAG00000011823	RC3H1	84	83.210	Chlorocebus_sabaeus
ENSOPRG00000013068	RC3H1	99	77.085	ENSCPBG00000014670	RC3H1	99	76.734	Chrysemys_picta_bellii
ENSOPRG00000013068	RC3H1	99	83.127	ENSCANG00000032120	RC3H1	99	83.039	Colobus_angolensis_palliatus
ENSOPRG00000013068	RC3H1	99	81.681	ENSCGRG00001020812	Rc3h1	99	81.504	Cricetulus_griseus_chok1gshd
ENSOPRG00000013068	RC3H1	99	81.681	ENSCGRG00000011952	Rc3h1	99	81.504	Cricetulus_griseus_crigri
ENSOPRG00000013068	RC3H1	55	88.264	ENSDNOG00000011494	RC3H1	99	88.264	Dasypus_novemcinctus
ENSOPRG00000013068	RC3H1	99	81.577	ENSDORG00000004855	Rc3h1	99	82.019	Dipodomys_ordii
ENSOPRG00000013068	RC3H1	78	87.909	ENSETEG00000012064	RC3H1	84	87.909	Echinops_telfairi
ENSOPRG00000013068	RC3H1	99	81.383	ENSEASG00005017000	RC3H1	99	81.947	Equus_asinus_asinus
ENSOPRG00000013068	RC3H1	99	81.206	ENSECAG00000021208	RC3H1	99	81.770	Equus_caballus
ENSOPRG00000013068	RC3H1	83	93.277	ENSEEUG00000014861	RC3H1	88	79.032	Erinaceus_europaeus
ENSOPRG00000013068	RC3H1	99	83.201	ENSFCAG00000014924	RC3H1	99	83.112	Felis_catus
ENSOPRG00000013068	RC3H1	99	74.606	ENSFALG00000002947	RC3H1	99	73.795	Ficedula_albicollis
ENSOPRG00000013068	RC3H1	99	81.256	ENSFDAG00000013303	RC3H1	99	81.609	Fukomys_damarensis
ENSOPRG00000013068	RC3H1	99	74.956	ENSGALG00000004587	RC3H1	99	74.408	Gallus_gallus
ENSOPRG00000013068	RC3H1	99	75.352	ENSGAGG00000018194	RC3H1	99	75.264	Gopherus_agassizii
ENSOPRG00000013068	RC3H1	99	76.476	ENSGGOG00000005735	RC3H1	99	76.388	Gorilla_gorilla
ENSOPRG00000013068	RC3H1	88	77.973	ENSHGLG00000004183	-	99	77.883	Heterocephalus_glaber_female
ENSOPRG00000013068	RC3H1	99	80.902	ENSHGLG00100008577	RC3H1	99	81.256	Heterocephalus_glaber_male
ENSOPRG00000013068	RC3H1	99	82.478	ENSSTOG00000016033	RC3H1	99	82.478	Ictidomys_tridecemlineatus
ENSOPRG00000013068	RC3H1	99	81.560	ENSJJAG00000018915	Rc3h1	99	81.206	Jaculus_jaculus
ENSOPRG00000013068	RC3H1	99	65.066	ENSLACG00000016186	RC3H1	99	68.592	Latimeria_chalumnae
ENSOPRG00000013068	RC3H1	97	83.196	ENSLAFG00000004367	RC3H1	99	83.715	Loxodonta_africana
ENSOPRG00000013068	RC3H1	99	82.935	ENSMFAG00000033725	RC3H1	99	82.847	Macaca_fascicularis
ENSOPRG00000013068	RC3H1	99	83.024	ENSMMUG00000000630	RC3H1	99	82.935	Macaca_mulatta
ENSOPRG00000013068	RC3H1	99	83.024	ENSMNEG00000035968	RC3H1	99	82.935	Macaca_nemestrina
ENSOPRG00000013068	RC3H1	99	83.112	ENSMLEG00000037455	RC3H1	99	83.024	Mandrillus_leucophaeus
ENSOPRG00000013068	RC3H1	92	83.367	ENSMAUG00000020864	Rc3h1	98	82.863	Mesocricetus_auratus
ENSOPRG00000013068	RC3H1	99	83.009	ENSMICG00000003000	RC3H1	99	83.363	Microcebus_murinus
ENSOPRG00000013068	RC3H1	90	82.544	ENSMOCG00000016587	Rc3h1	94	82.150	Microtus_ochrogaster
ENSOPRG00000013068	RC3H1	99	79.240	ENSMODG00000004289	RC3H1	99	79.505	Monodelphis_domestica
ENSOPRG00000013068	RC3H1	99	80.354	MGP_CAROLIEiJ_G0014756	Rc3h1	99	80.531	Mus_caroli
ENSOPRG00000013068	RC3H1	99	80.177	ENSMUSG00000040423	Rc3h1	99	80.177	Mus_musculus
ENSOPRG00000013068	RC3H1	99	80.088	MGP_PahariEiJ_G0027992	Rc3h1	99	80.265	Mus_pahari
ENSOPRG00000013068	RC3H1	99	79.912	MGP_SPRETEiJ_G0015563	Rc3h1	99	79.912	Mus_spretus
ENSOPRG00000013068	RC3H1	99	82.847	ENSMPUG00000004747	RC3H1	99	82.478	Mustela_putorius_furo
ENSOPRG00000013068	RC3H1	99	82.743	ENSMLUG00000011127	RC3H1	99	82.670	Myotis_lucifugus
ENSOPRG00000013068	RC3H1	99	81.681	ENSNGAG00000011135	Rc3h1	99	81.593	Nannospalax_galili
ENSOPRG00000013068	RC3H1	99	83.201	ENSNLEG00000015327	RC3H1	99	83.112	Nomascus_leucogenys
ENSOPRG00000013068	RC3H1	99	81.416	ENSODEG00000014185	RC3H1	99	81.858	Octodon_degus
ENSOPRG00000013068	RC3H1	99	78.653	ENSOANG00000000924	RC3H1	99	78.828	Ornithorhynchus_anatinus
ENSOPRG00000013068	RC3H1	98	83.752	ENSOCUG00000004930	RC3H1	98	84.111	Oryctolagus_cuniculus
ENSOPRG00000013068	RC3H1	99	75.442	ENSOGAG00000004044	RC3H1	99	75.795	Otolemur_garnettii
ENSOPRG00000013068	RC3H1	99	81.898	ENSOARG00000013011	RC3H1	99	81.810	Ovis_aries
ENSOPRG00000013068	RC3H1	99	83.039	ENSPPAG00000039253	RC3H1	99	82.951	Pan_paniscus
ENSOPRG00000013068	RC3H1	99	82.832	ENSPPRG00000009007	RC3H1	99	82.832	Panthera_pardus
ENSOPRG00000013068	RC3H1	99	83.172	ENSPTIG00000015326	RC3H1	99	83.172	Panthera_tigris_altaica
ENSOPRG00000013068	RC3H1	99	83.039	ENSPTRG00000001702	RC3H1	99	82.951	Pan_troglodytes
ENSOPRG00000013068	RC3H1	99	83.024	ENSPANG00000008886	RC3H1	99	82.935	Papio_anubis
ENSOPRG00000013068	RC3H1	99	76.186	ENSPSIG00000016181	RC3H1	99	76.626	Pelodiscus_sinensis
ENSOPRG00000013068	RC3H1	99	80.354	ENSPEMG00000011966	Rc3h1	99	80.354	Peromyscus_maniculatus_bairdii
ENSOPRG00000013068	RC3H1	70	82.166	ENSPCIG00000002058	RC3H1	98	81.529	Phascolarctos_cinereus
ENSOPRG00000013068	RC3H1	99	80.371	ENSPPYG00000000490	RC3H1	96	83.855	Pongo_abelii
ENSOPRG00000013068	RC3H1	77	82.609	ENSPCAG00000010775	RC3H1	83	83.066	Procavia_capensis
ENSOPRG00000013068	RC3H1	82	87.794	ENSPCOG00000021795	RC3H1	96	88.223	Propithecus_coquereli
ENSOPRG00000013068	RC3H1	99	75.221	ENSPVAG00000007593	RC3H1	99	75.221	Pteropus_vampyrus
ENSOPRG00000013068	RC3H1	97	54.200	ENSPNAG00000023439	rc3h1a	95	76.923	Pygocentrus_nattereri
ENSOPRG00000013068	RC3H1	99	82.951	ENSRBIG00000037743	RC3H1	99	82.862	Rhinopithecus_bieti
ENSOPRG00000013068	RC3H1	99	82.847	ENSRROG00000036546	RC3H1	99	82.759	Rhinopithecus_roxellana
ENSOPRG00000013068	RC3H1	90	79.232	ENSSBOG00000010664	RC3H1	96	82.016	Saimiri_boliviensis_boliviensis
ENSOPRG00000013068	RC3H1	99	78.464	ENSSHAG00000007589	RC3H1	99	78.729	Sarcophilus_harrisii
ENSOPRG00000013068	RC3H1	87	87.330	ENSSARG00000004660	RC3H1	86	87.330	Sorex_araneus
ENSOPRG00000013068	RC3H1	99	72.471	ENSSPUG00000018472	RC3H1	99	72.120	Sphenodon_punctatus
ENSOPRG00000013068	RC3H1	99	83.363	ENSSSCG00000015498	RC3H1	99	83.289	Sus_scrofa
ENSOPRG00000013068	RC3H1	99	75.022	ENSTGUG00000004090	RC3H1	99	74.736	Taeniopygia_guttata
ENSOPRG00000013068	RC3H1	89	88.618	ENSTBEG00000005015	RC3H1	88	88.618	Tupaia_belangeri
ENSOPRG00000013068	RC3H1	99	82.524	ENSTTRG00000008572	RC3H1	99	82.524	Tursiops_truncatus
ENSOPRG00000013068	RC3H1	99	81.947	ENSUAMG00000019525	RC3H1	99	81.947	Ursus_americanus
ENSOPRG00000013068	RC3H1	99	82.493	ENSUMAG00000020087	RC3H1	99	82.493	Ursus_maritimus
ENSOPRG00000013068	RC3H1	91	82.910	ENSVPAG00000002591	RC3H1	91	82.572	Vicugna_pacos
ENSOPRG00000013068	RC3H1	99	82.716	ENSVVUG00000014201	RC3H1	99	82.716	Vulpes_vulpes
ENSOPRG00000013068	RC3H1	99	68.174	ENSXETG00000020030	rc3h1	99	67.624	Xenopus_tropicalis