EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000013390 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 5369 bases
Position: chrGeneScaffold_1924:936535-941903
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000012215	R3H	PF01424.22	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000013385	R3HCC1-201	1353	-	ENSOPRP00000012215	451 (aa)	-	UPI0001778C9D

Gene Model

Click here to download ENSOPRG00000013390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000013390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000013390	R3HCC1	96	71.812	ENSG00000104679	R3HCC1	98	85.714	Homo_sapiens
ENSOPRG00000013390	R3HCC1	64	46.405	ENSAPOG00000003616	r3hcc1	64	46.405	Acanthochromis_polyacanthus
ENSOPRG00000013390	R3HCC1	95	68.864	ENSAMEG00000002963	R3HCC1	95	68.352	Ailuropoda_melanoleuca
ENSOPRG00000013390	R3HCC1	64	43.056	ENSACIG00000017144	r3hcc1	84	38.356	Amphilophus_citrinellus
ENSOPRG00000013390	R3HCC1	60	49.296	ENSAOCG00000003945	r3hcc1	69	47.134	Amphiprion_ocellaris
ENSOPRG00000013390	R3HCC1	60	49.296	ENSAPEG00000003613	r3hcc1	69	46.497	Amphiprion_percula
ENSOPRG00000013390	R3HCC1	61	42.208	ENSATEG00000023860	r3hcc1	99	33.002	Anabas_testudineus
ENSOPRG00000013390	R3HCC1	93	46.667	ENSACAG00000016627	R3HCC1	96	46.785	Anolis_carolinensis
ENSOPRG00000013390	R3HCC1	97	73.497	ENSANAG00000036169	R3HCC1	96	73.497	Aotus_nancymaae
ENSOPRG00000013390	R3HCC1	96	68.243	ENSBTAG00000025830	R3HCC1	97	68.161	Bos_taurus
ENSOPRG00000013390	R3HCC1	96	71.588	ENSCJAG00000020118	R3HCC1	100	64.108	Callithrix_jacchus
ENSOPRG00000013390	R3HCC1	96	67.043	ENSCAFG00000009210	R3HCC1	96	67.342	Canis_familiaris
ENSOPRG00000013390	R3HCC1	82	63.185	ENSCAFG00020012870	R3HCC1	89	63.185	Canis_lupus_dingo
ENSOPRG00000013390	R3HCC1	95	63.758	ENSCHIG00000009107	R3HCC1	99	63.535	Capra_hircus
ENSOPRG00000013390	R3HCC1	97	74.215	ENSTSYG00000000511	R3HCC1	78	74.215	Carlito_syrichta
ENSOPRG00000013390	R3HCC1	85	55.814	ENSCAPG00000015813	R3HCC1	99	55.814	Cavia_aperea
ENSOPRG00000013390	R3HCC1	94	62.712	ENSCPOG00000009696	R3HCC1	100	62.712	Cavia_porcellus
ENSOPRG00000013390	R3HCC1	96	72.931	ENSCCAG00000037811	R3HCC1	95	72.549	Cebus_capucinus
ENSOPRG00000013390	R3HCC1	99	72.331	ENSCATG00000032971	R3HCC1	100	65.463	Cercocebus_atys
ENSOPRG00000013390	R3HCC1	96	70.136	ENSCLAG00000015556	R3HCC1	87	69.978	Chinchilla_lanigera
ENSOPRG00000013390	R3HCC1	99	72.113	ENSCSAG00000016250	R3HCC1	95	72.331	Chlorocebus_sabaeus
ENSOPRG00000013390	R3HCC1	95	66.366	ENSCHOG00000000396	R3HCC1	98	65.646	Choloepus_hoffmanni
ENSOPRG00000013390	R3HCC1	99	71.895	ENSCANG00000029441	R3HCC1	95	71.895	Colobus_angolensis_palliatus
ENSOPRG00000013390	R3HCC1	91	34.192	ENSCSEG00000005748	r3hcc1	99	34.266	Cynoglossus_semilaevis
ENSOPRG00000013390	R3HCC1	82	33.073	ENSCVAG00000002640	r3hcc1	98	32.199	Cyprinodon_variegatus
ENSOPRG00000013390	R3HCC1	97	69.351	ENSDNOG00000007168	R3HCC1	95	68.928	Dasypus_novemcinctus
ENSOPRG00000013390	R3HCC1	95	60.744	ENSDORG00000026365	R3hcc1	78	78.488	Dipodomys_ordii
ENSOPRG00000013390	R3HCC1	97	59.465	ENSETEG00000001147	R3HCC1	98	60.356	Echinops_telfairi
ENSOPRG00000013390	R3HCC1	96	69.283	ENSEASG00005018782	R3HCC1	81	69.283	Equus_asinus_asinus
ENSOPRG00000013390	R3HCC1	96	69.196	ENSECAG00000025013	R3HCC1	99	69.196	Equus_caballus
ENSOPRG00000013390	R3HCC1	98	64.396	ENSEEUG00000011918	R3HCC1	99	64.396	Erinaceus_europaeus
ENSOPRG00000013390	R3HCC1	89	36.300	ENSELUG00000023650	r3hcc1	99	35.129	Esox_lucius
ENSOPRG00000013390	R3HCC1	98	68.584	ENSFCAG00000012395	R3HCC1	97	69.615	Felis_catus
ENSOPRG00000013390	R3HCC1	95	62.554	ENSFDAG00000001572	R3HCC1	99	62.338	Fukomys_damarensis
ENSOPRG00000013390	R3HCC1	93	35.514	ENSGAFG00000008747	-	91	36.132	Gambusia_affinis
ENSOPRG00000013390	R3HCC1	93	34.169	ENSGACG00000008447	r3hcc1	97	33.937	Gasterosteus_aculeatus
ENSOPRG00000013390	R3HCC1	99	72.308	ENSGGOG00000013817	R3HCC1	100	72.665	Gorilla_gorilla
ENSOPRG00000013390	R3HCC1	51	46.988	ENSHBUG00000022250	-	67	46.988	Haplochromis_burtoni
ENSOPRG00000013390	R3HCC1	96	65.982	ENSHGLG00000010517	R3HCC1	95	64.706	Heterocephalus_glaber_female
ENSOPRG00000013390	R3HCC1	96	65.982	ENSHGLG00100006388	R3HCC1	95	64.706	Heterocephalus_glaber_male
ENSOPRG00000013390	R3HCC1	92	34.442	ENSHCOG00000011745	r3hcc1	94	35.566	Hippocampus_comes
ENSOPRG00000013390	R3HCC1	92	37.530	ENSIPUG00000024504	r3hcc1	87	34.023	Ictalurus_punctatus
ENSOPRG00000013390	R3HCC1	96	63.920	ENSSTOG00000027130	R3HCC1	85	78.035	Ictidomys_tridecemlineatus
ENSOPRG00000013390	R3HCC1	95	62.232	ENSJJAG00000013075	R3hcc1	100	62.661	Jaculus_jaculus
ENSOPRG00000013390	R3HCC1	87	33.489	ENSKMAG00000000286	r3hcc1	98	33.732	Kryptolebias_marmoratus
ENSOPRG00000013390	R3HCC1	92	37.528	ENSLACG00000011894	R3HCC1	66	47.059	Latimeria_chalumnae
ENSOPRG00000013390	R3HCC1	93	33.790	ENSLOCG00000015442	r3hcc1	99	33.575	Lepisosteus_oculatus
ENSOPRG00000013390	R3HCC1	98	61.538	ENSLAFG00000016137	R3HCC1	98	61.538	Loxodonta_africana
ENSOPRG00000013390	R3HCC1	99	72.113	ENSMFAG00000032894	R3HCC1	100	65.237	Macaca_fascicularis
ENSOPRG00000013390	R3HCC1	99	72.113	ENSMMUG00000016655	R3HCC1	94	72.331	Macaca_mulatta
ENSOPRG00000013390	R3HCC1	99	71.895	ENSMNEG00000043283	R3HCC1	100	65.011	Macaca_nemestrina
ENSOPRG00000013390	R3HCC1	99	72.549	ENSMLEG00000030147	R3HCC1	95	72.767	Mandrillus_leucophaeus
ENSOPRG00000013390	R3HCC1	88	32.840	ENSMAMG00000018146	r3hcc1	99	31.477	Mastacembelus_armatus
ENSOPRG00000013390	R3HCC1	57	60.311	ENSMAUG00000016096	R3hcc1	99	58.263	Mesocricetus_auratus
ENSOPRG00000013390	R3HCC1	99	71.772	ENSMICG00000011146	R3HCC1	97	71.772	Microcebus_murinus
ENSOPRG00000013390	R3HCC1	93	45.824	ENSMODG00000016809	-	100	46.501	Monodelphis_domestica
ENSOPRG00000013390	R3HCC1	88	32.857	ENSMALG00000000731	r3hcc1	98	32.536	Monopterus_albus
ENSOPRG00000013390	R3HCC1	78	74.847	MGP_CAROLIEiJ_G0019467	R3hcc1	73	74.850	Mus_caroli
ENSOPRG00000013390	R3HCC1	90	73.810	MGP_PahariEiJ_G0030484	R3hcc1	73	73.810	Mus_pahari
ENSOPRG00000013390	R3HCC1	78	75.000	MGP_SPRETEiJ_G0020359	R3hcc1	73	74.251	Mus_spretus
ENSOPRG00000013390	R3HCC1	96	69.318	ENSMPUG00000003457	R3HCC1	90	68.341	Mustela_putorius_furo
ENSOPRG00000013390	R3HCC1	99	67.028	ENSMLUG00000000266	R3HCC1	96	67.679	Myotis_lucifugus
ENSOPRG00000013390	R3HCC1	95	64.208	ENSNGAG00000016747	R3hcc1	100	63.774	Nannospalax_galili
ENSOPRG00000013390	R3HCC1	96	65.022	ENSNLEG00000015944	R3HCC1	95	64.924	Nomascus_leucogenys
ENSOPRG00000013390	R3HCC1	94	53.935	ENSMEUG00000010587	R3HCC1	98	52.283	Notamacropus_eugenii
ENSOPRG00000013390	R3HCC1	93	63.793	ENSODEG00000007529	R3HCC1	99	63.907	Octodon_degus
ENSOPRG00000013390	R3HCC1	95	57.336	ENSOANG00000013877	R3HCC1	97	56.757	Ornithorhynchus_anatinus
ENSOPRG00000013390	R3HCC1	96	75.566	ENSOCUG00000023554	R3HCC1	90	75.109	Oryctolagus_cuniculus
ENSOPRG00000013390	R3HCC1	88	35.323	ENSORLG00000016816	r3hcc1	80	41.463	Oryzias_latipes
ENSOPRG00000013390	R3HCC1	88	36.139	ENSOMEG00000000816	r3hcc1	99	35.891	Oryzias_melastigma
ENSOPRG00000013390	R3HCC1	97	70.156	ENSOGAG00000001291	R3HCC1	94	70.601	Otolemur_garnettii
ENSOPRG00000013390	R3HCC1	95	67.873	ENSOARG00000010146	R3HCC1	96	67.873	Ovis_aries
ENSOPRG00000013390	R3HCC1	96	71.588	ENSPPAG00000033165	R3HCC1	100	71.558	Pan_paniscus
ENSOPRG00000013390	R3HCC1	95	69.021	ENSPPRG00000002522	R3HCC1	100	69.476	Panthera_pardus
ENSOPRG00000013390	R3HCC1	88	68.317	ENSPTIG00000011230	R3HCC1	95	67.920	Panthera_tigris_altaica
ENSOPRG00000013390	R3HCC1	96	71.812	ENSPTRG00000020076	R3HCC1	95	71.678	Pan_troglodytes
ENSOPRG00000013390	R3HCC1	99	72.767	ENSPANG00000000453	R3HCC1	95	72.985	Papio_anubis
ENSOPRG00000013390	R3HCC1	85	35.751	ENSPKIG00000014426	-	95	35.476	Paramormyrops_kingsleyae
ENSOPRG00000013390	R3HCC1	87	50.120	ENSPCIG00000022718	-	85	48.426	Phascolarctos_cinereus
ENSOPRG00000013390	R3HCC1	92	35.104	ENSPFOG00000022301	r3hcc1	65	47.059	Poecilia_formosa
ENSOPRG00000013390	R3HCC1	92	34.186	ENSPLAG00000010794	r3hcc1	90	34.713	Poecilia_latipinna
ENSOPRG00000013390	R3HCC1	92	35.104	ENSPMEG00000022515	r3hcc1	65	47.059	Poecilia_mexicana
ENSOPRG00000013390	R3HCC1	92	33.962	ENSPREG00000000713	r3hcc1	90	34.977	Poecilia_reticulata
ENSOPRG00000013390	R3HCC1	88	71.638	ENSPPYG00000018436	R3HCC1	100	71.638	Pongo_abelii
ENSOPRG00000013390	R3HCC1	71	78.710	ENSPCAG00000012229	R3HCC1	75	78.710	Procavia_capensis
ENSOPRG00000013390	R3HCC1	95	71.655	ENSPCOG00000027554	R3HCC1	100	72.851	Propithecus_coquereli
ENSOPRG00000013390	R3HCC1	99	65.000	ENSPVAG00000009829	R3HCC1	99	65.217	Pteropus_vampyrus
ENSOPRG00000013390	R3HCC1	89	33.498	ENSPNAG00000023875	r3hcc1	99	32.843	Pygocentrus_nattereri
ENSOPRG00000013390	R3HCC1	96	57.260	ENSRNOG00000016777	AABR07018321.1	64	74.251	Rattus_norvegicus
ENSOPRG00000013390	R3HCC1	95	72.686	ENSRBIG00000028045	R3HCC1	100	72.686	Rhinopithecus_bieti
ENSOPRG00000013390	R3HCC1	99	72.767	ENSRROG00000031126	R3HCC1	100	65.688	Rhinopithecus_roxellana
ENSOPRG00000013390	R3HCC1	95	71.558	ENSSBOG00000022590	R3HCC1	100	71.558	Saimiri_boliviensis_boliviensis
ENSOPRG00000013390	R3HCC1	94	46.966	ENSSHAG00000016526	-	67	64.602	Sarcophilus_harrisii
ENSOPRG00000013390	R3HCC1	86	37.845	ENSSFOG00015013507	r3hcc1	97	37.343	Scleropages_formosus
ENSOPRG00000013390	R3HCC1	53	75.524	ENSSARG00000013514	-	54	75.524	Sorex_araneus
ENSOPRG00000013390	R3HCC1	89	32.870	ENSSPAG00000013497	r3hcc1	97	32.407	Stegastes_partitus
ENSOPRG00000013390	R3HCC1	97	69.623	ENSSSCG00000039915	-	96	69.063	Sus_scrofa
ENSOPRG00000013390	R3HCC1	97	63.252	ENSSSCG00000037347	-	92	63.474	Sus_scrofa
ENSOPRG00000013390	R3HCC1	90	33.173	ENSTRUG00000015880	r3hcc1	97	31.415	Takifugu_rubripes
ENSOPRG00000013390	R3HCC1	95	64.384	ENSTTRG00000012247	R3HCC1	99	63.216	Tursiops_truncatus
ENSOPRG00000013390	R3HCC1	94	68.421	ENSUAMG00000007344	R3HCC1	99	68.421	Ursus_americanus
ENSOPRG00000013390	R3HCC1	97	66.815	ENSVVUG00000005056	R3HCC1	96	67.342	Vulpes_vulpes
ENSOPRG00000013390	R3HCC1	89	36.320	ENSXCOG00000017626	r3hcc1	89	36.562	Xiphophorus_couchianus
ENSOPRG00000013390	R3HCC1	93	35.104	ENSXMAG00000018375	r3hcc1	91	36.272	Xiphophorus_maculatus