EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000013482 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 55902 bases
Position: chrGeneScaffold_3287:78935-134836
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000012345	Npa1	PF11707.8	4.9e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000013529	URB1-201	6663	-	ENSOPRP00000012345	2221 (aa)	-	UPI00017785D1

Gene Model

Click here to download ENSOPRG00000013482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000013482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000013482	URB1	99	74.967	ENSG00000142207	URB1	99	74.824	Homo_sapiens
ENSOPRG00000013482	URB1	99	41.243	ENSAPOG00000020308	urb1	99	41.243	Acanthochromis_polyacanthus
ENSOPRG00000013482	URB1	99	73.099	ENSAMEG00000011998	URB1	99	73.099	Ailuropoda_melanoleuca
ENSOPRG00000013482	URB1	95	42.766	ENSACIG00000003248	urb1	97	42.838	Amphilophus_citrinellus
ENSOPRG00000013482	URB1	99	39.309	ENSAOCG00000010364	urb1	99	39.353	Amphiprion_ocellaris
ENSOPRG00000013482	URB1	97	50.475	ENSAPEG00000010758	urb1	99	50.475	Amphiprion_percula
ENSOPRG00000013482	URB1	99	41.825	ENSATEG00000011790	urb1	99	41.825	Anabas_testudineus
ENSOPRG00000013482	URB1	97	52.525	ENSAPLG00000012791	URB1	99	52.572	Anas_platyrhynchos
ENSOPRG00000013482	URB1	99	50.221	ENSACAG00000002817	URB1	99	50.022	Anolis_carolinensis
ENSOPRG00000013482	URB1	100	74.089	ENSANAG00000024617	URB1	99	74.089	Aotus_nancymaae
ENSOPRG00000013482	URB1	99	43.382	ENSACLG00000024865	urb1	99	43.057	Astatotilapia_calliptera
ENSOPRG00000013482	URB1	98	38.832	ENSAMXG00000012306	urb1	99	38.728	Astyanax_mexicanus
ENSOPRG00000013482	URB1	99	70.635	ENSBTAG00000012412	URB1	99	70.679	Bos_taurus
ENSOPRG00000013482	URB1	100	73.684	ENSCJAG00000009118	URB1	99	73.684	Callithrix_jacchus
ENSOPRG00000013482	URB1	99	73.030	ENSCAFG00000008892	URB1	99	73.030	Canis_familiaris
ENSOPRG00000013482	URB1	99	72.044	ENSCAFG00020025994	-	99	72.000	Canis_lupus_dingo
ENSOPRG00000013482	URB1	99	72.747	ENSCAFG00020025987	-	99	72.747	Canis_lupus_dingo
ENSOPRG00000013482	URB1	99	70.988	ENSCHIG00000015645	URB1	99	71.032	Capra_hircus
ENSOPRG00000013482	URB1	100	74.066	ENSTSYG00000013286	URB1	99	74.066	Carlito_syrichta
ENSOPRG00000013482	URB1	98	69.964	ENSCAPG00000015589	URB1	99	69.964	Cavia_aperea
ENSOPRG00000013482	URB1	100	71.127	ENSCPOG00000006748	URB1	99	71.127	Cavia_porcellus
ENSOPRG00000013482	URB1	100	74.121	ENSCCAG00000021299	URB1	99	74.121	Cebus_capucinus
ENSOPRG00000013482	URB1	100	74.649	ENSCATG00000042630	URB1	99	74.649	Cercocebus_atys
ENSOPRG00000013482	URB1	100	72.755	ENSCLAG00000005262	URB1	99	72.755	Chinchilla_lanigera
ENSOPRG00000013482	URB1	100	73.097	ENSCSAG00000009584	URB1	99	73.097	Chlorocebus_sabaeus
ENSOPRG00000013482	URB1	99	55.041	ENSCPBG00000006454	URB1	99	55.041	Chrysemys_picta_bellii
ENSOPRG00000013482	URB1	100	74.561	ENSCANG00000031088	URB1	99	74.561	Colobus_angolensis_palliatus
ENSOPRG00000013482	URB1	99	68.953	ENSCGRG00001010616	Urb1	99	68.943	Cricetulus_griseus_chok1gshd
ENSOPRG00000013482	URB1	98	68.674	ENSCGRG00000015840	Urb1	99	68.674	Cricetulus_griseus_crigri
ENSOPRG00000013482	URB1	99	40.729	ENSCSEG00000012616	urb1	99	40.834	Cynoglossus_semilaevis
ENSOPRG00000013482	URB1	96	49.470	ENSCVAG00000009076	urb1	99	50.746	Cyprinodon_variegatus
ENSOPRG00000013482	URB1	98	42.227	ENSDARG00000060308	urb1	98	42.565	Danio_rerio
ENSOPRG00000013482	URB1	85	72.041	ENSDNOG00000015586	URB1	99	72.041	Dasypus_novemcinctus
ENSOPRG00000013482	URB1	100	72.371	ENSDORG00000006735	Urb1	99	72.371	Dipodomys_ordii
ENSOPRG00000013482	URB1	92	71.455	ENSETEG00000009080	URB1	92	71.455	Echinops_telfairi
ENSOPRG00000013482	URB1	100	72.276	ENSEASG00005007711	URB1	99	72.276	Equus_asinus_asinus
ENSOPRG00000013482	URB1	97	82.293	ENSECAG00000013206	URB1	99	82.293	Equus_caballus
ENSOPRG00000013482	URB1	56	82.158	ENSEEUG00000003626	-	56	82.158	Erinaceus_europaeus
ENSOPRG00000013482	URB1	99	42.357	ENSELUG00000020516	urb1	96	53.153	Esox_lucius
ENSOPRG00000013482	URB1	99	72.791	ENSFCAG00000002177	URB1	99	72.879	Felis_catus
ENSOPRG00000013482	URB1	98	48.613	ENSFALG00000004636	URB1	99	48.851	Ficedula_albicollis
ENSOPRG00000013482	URB1	100	71.692	ENSFDAG00000007288	URB1	95	71.868	Fukomys_damarensis
ENSOPRG00000013482	URB1	99	40.981	ENSFHEG00000000202	urb1	99	41.310	Fundulus_heteroclitus
ENSOPRG00000013482	URB1	93	44.291	ENSGMOG00000001838	urb1	94	44.118	Gadus_morhua
ENSOPRG00000013482	URB1	99	52.993	ENSGALG00000015887	URB1	99	52.993	Gallus_gallus
ENSOPRG00000013482	URB1	93	50.374	ENSGAFG00000020694	urb1	97	50.374	Gambusia_affinis
ENSOPRG00000013482	URB1	99	43.084	ENSGACG00000011703	urb1	99	42.952	Gasterosteus_aculeatus
ENSOPRG00000013482	URB1	99	54.526	ENSGAGG00000022544	URB1	99	54.526	Gopherus_agassizii
ENSOPRG00000013482	URB1	100	74.912	ENSGGOG00000000285	URB1	99	74.912	Gorilla_gorilla
ENSOPRG00000013482	URB1	99	43.293	ENSHBUG00000001904	urb1	99	42.970	Haplochromis_burtoni
ENSOPRG00000013482	URB1	100	71.453	ENSHGLG00000004907	URB1	99	71.453	Heterocephalus_glaber_female
ENSOPRG00000013482	URB1	100	72.088	ENSHGLG00100010749	URB1	99	72.088	Heterocephalus_glaber_male
ENSOPRG00000013482	URB1	71	46.247	ENSHCOG00000018683	urb1	95	47.059	Hippocampus_comes
ENSOPRG00000013482	URB1	99	38.455	ENSIPUG00000014721	urb1	99	38.729	Ictalurus_punctatus
ENSOPRG00000013482	URB1	99	74.431	ENSSTOG00000004539	URB1	99	74.206	Ictidomys_tridecemlineatus
ENSOPRG00000013482	URB1	98	40.009	ENSKMAG00000006001	urb1	98	45.483	Kryptolebias_marmoratus
ENSOPRG00000013482	URB1	94	49.571	ENSLBEG00000027208	urb1	99	49.571	Labrus_bergylta
ENSOPRG00000013482	URB1	99	45.573	ENSLACG00000017059	URB1	99	45.573	Latimeria_chalumnae
ENSOPRG00000013482	URB1	99	43.949	ENSLOCG00000009190	urb1	99	43.949	Lepisosteus_oculatus
ENSOPRG00000013482	URB1	100	70.408	ENSLAFG00000010407	URB1	100	70.408	Loxodonta_africana
ENSOPRG00000013482	URB1	100	74.692	ENSMFAG00000034391	URB1	97	74.692	Macaca_fascicularis
ENSOPRG00000013482	URB1	100	74.517	ENSMMUG00000010295	URB1	99	74.517	Macaca_mulatta
ENSOPRG00000013482	URB1	100	73.407	ENSMNEG00000032981	URB1	99	73.407	Macaca_nemestrina
ENSOPRG00000013482	URB1	100	74.780	ENSMLEG00000041435	URB1	99	74.780	Mandrillus_leucophaeus
ENSOPRG00000013482	URB1	99	41.285	ENSMAMG00000011238	urb1	99	41.189	Mastacembelus_armatus
ENSOPRG00000013482	URB1	99	40.441	ENSMZEG00005011862	urb1	99	40.148	Maylandia_zebra
ENSOPRG00000013482	URB1	98	53.197	ENSMGAG00000014512	URB1	99	53.197	Meleagris_gallopavo
ENSOPRG00000013482	URB1	93	73.021	ENSMAUG00000010516	Urb1	99	73.167	Mesocricetus_auratus
ENSOPRG00000013482	URB1	100	73.955	ENSMICG00000016424	URB1	99	73.955	Microcebus_murinus
ENSOPRG00000013482	URB1	99	67.783	ENSMOCG00000012613	Urb1	99	67.783	Microtus_ochrogaster
ENSOPRG00000013482	URB1	100	58.056	ENSMODG00000021076	URB1	100	58.056	Monodelphis_domestica
ENSOPRG00000013482	URB1	99	40.805	ENSMALG00000017411	urb1	99	50.000	Monopterus_albus
ENSOPRG00000013482	URB1	100	68.220	MGP_CAROLIEiJ_G0020948	Urb1	99	68.220	Mus_caroli
ENSOPRG00000013482	URB1	100	68.176	ENSMUSG00000039929	Urb1	99	68.176	Mus_musculus
ENSOPRG00000013482	URB1	100	68.132	MGP_PahariEiJ_G0016653	Urb1	99	68.132	Mus_pahari
ENSOPRG00000013482	URB1	99	67.942	MGP_SPRETEiJ_G0021854	Urb1	99	67.942	Mus_spretus
ENSOPRG00000013482	URB1	100	73.113	ENSMPUG00000001123	URB1	99	73.113	Mustela_putorius_furo
ENSOPRG00000013482	URB1	99	69.261	ENSNGAG00000001905	Urb1	99	69.261	Nannospalax_galili
ENSOPRG00000013482	URB1	80	44.070	ENSNBRG00000001049	urb1	98	44.062	Neolamprologus_brichardi
ENSOPRG00000013482	URB1	99	73.380	ENSNLEG00000026872	URB1	99	73.243	Nomascus_leucogenys
ENSOPRG00000013482	URB1	96	55.897	ENSMEUG00000010828	URB1	96	56.026	Notamacropus_eugenii
ENSOPRG00000013482	URB1	100	71.171	ENSODEG00000002587	URB1	99	71.171	Octodon_degus
ENSOPRG00000013482	URB1	99	43.120	ENSONIG00000005599	urb1	99	43.120	Oreochromis_niloticus
ENSOPRG00000013482	URB1	99	80.194	ENSOCUG00000009381	URB1	99	80.194	Oryctolagus_cuniculus
ENSOPRG00000013482	URB1	98	43.326	ENSORLG00000003429	urb1	98	43.326	Oryzias_latipes
ENSOPRG00000013482	URB1	98	43.382	ENSORLG00020013785	urb1	99	43.776	Oryzias_latipes_hni
ENSOPRG00000013482	URB1	91	51.117	ENSORLG00015019421	urb1	98	51.117	Oryzias_latipes_hsok
ENSOPRG00000013482	URB1	78	48.256	ENSOMEG00000002094	urb1	98	48.256	Oryzias_melastigma
ENSOPRG00000013482	URB1	100	73.789	ENSOGAG00000017140	URB1	99	73.789	Otolemur_garnettii
ENSOPRG00000013482	URB1	97	70.059	ENSOARG00000013679	URB1	99	70.311	Ovis_aries
ENSOPRG00000013482	URB1	100	75.088	ENSPPAG00000003423	URB1	99	75.088	Pan_paniscus
ENSOPRG00000013482	URB1	99	72.975	ENSPPRG00000023131	URB1	99	73.072	Panthera_pardus
ENSOPRG00000013482	URB1	92	72.404	ENSPTIG00000016125	URB1	98	72.404	Panthera_tigris_altaica
ENSOPRG00000013482	URB1	100	74.956	ENSPTRG00000013852	URB1	99	74.956	Pan_troglodytes
ENSOPRG00000013482	URB1	100	74.780	ENSPANG00000021964	URB1	99	74.780	Papio_anubis
ENSOPRG00000013482	URB1	99	44.829	ENSPKIG00000003683	urb1	98	44.829	Paramormyrops_kingsleyae
ENSOPRG00000013482	URB1	99	69.556	ENSPEMG00000021205	Urb1	99	69.556	Peromyscus_maniculatus_bairdii
ENSOPRG00000013482	URB1	76	36.120	ENSPMAG00000009733	URB1	100	33.368	Petromyzon_marinus
ENSOPRG00000013482	URB1	100	57.766	ENSPCIG00000016350	URB1	100	57.853	Phascolarctos_cinereus
ENSOPRG00000013482	URB1	96	42.389	ENSPLAG00000004371	urb1	98	42.389	Poecilia_latipinna
ENSOPRG00000013482	URB1	99	42.622	ENSPMEG00000006634	urb1	98	42.609	Poecilia_mexicana
ENSOPRG00000013482	URB1	98	42.481	ENSPREG00000013453	urb1	98	42.385	Poecilia_reticulata
ENSOPRG00000013482	URB1	99	74.658	ENSPPYG00000011359	URB1	99	74.517	Pongo_abelii
ENSOPRG00000013482	URB1	99	61.471	ENSPCAG00000007430	URB1	99	61.471	Procavia_capensis
ENSOPRG00000013482	URB1	100	75.077	ENSPCOG00000022695	URB1	99	75.077	Propithecus_coquereli
ENSOPRG00000013482	URB1	100	71.178	ENSPVAG00000000889	URB1	99	71.178	Pteropus_vampyrus
ENSOPRG00000013482	URB1	99	42.313	ENSPNYG00000010589	urb1	99	41.999	Pundamilia_nyererei
ENSOPRG00000013482	URB1	99	39.754	ENSPNAG00000019324	urb1	99	39.825	Pygocentrus_nattereri
ENSOPRG00000013482	URB1	100	68.234	ENSRNOG00000002080	Urb1	99	68.366	Rattus_norvegicus
ENSOPRG00000013482	URB1	100	74.033	ENSRBIG00000033122	URB1	99	74.033	Rhinopithecus_bieti
ENSOPRG00000013482	URB1	100	74.077	ENSRROG00000040237	URB1	99	74.077	Rhinopithecus_roxellana
ENSOPRG00000013482	URB1	100	73.913	ENSSBOG00000027672	URB1	99	73.913	Saimiri_boliviensis_boliviensis
ENSOPRG00000013482	URB1	100	58.148	ENSSHAG00000005140	URB1	100	58.148	Sarcophilus_harrisii
ENSOPRG00000013482	URB1	93	44.550	ENSSFOG00015000339	urb1	99	44.718	Scleropages_formosus
ENSOPRG00000013482	URB1	98	42.648	ENSSMAG00000003782	urb1	99	42.512	Scophthalmus_maximus
ENSOPRG00000013482	URB1	99	43.001	ENSSDUG00000012313	urb1	99	43.001	Seriola_dumerili
ENSOPRG00000013482	URB1	99	43.063	ENSSLDG00000023179	urb1	99	42.988	Seriola_lalandi_dorsalis
ENSOPRG00000013482	URB1	99	52.049	ENSSPUG00000012447	URB1	99	52.070	Sphenodon_punctatus
ENSOPRG00000013482	URB1	99	43.065	ENSSPAG00000006325	urb1	99	43.065	Stegastes_partitus
ENSOPRG00000013482	URB1	100	72.531	ENSSSCG00000032024	URB1	99	72.531	Sus_scrofa
ENSOPRG00000013482	URB1	75	55.602	ENSTGUG00000013442	URB1	100	55.364	Taeniopygia_guttata
ENSOPRG00000013482	URB1	98	41.778	ENSTRUG00000009372	urb1	98	41.726	Takifugu_rubripes
ENSOPRG00000013482	URB1	99	41.067	ENSTNIG00000016277	urb1	99	41.060	Tetraodon_nigroviridis
ENSOPRG00000013482	URB1	78	87.435	ENSTBEG00000010044	URB1	77	87.435	Tupaia_belangeri
ENSOPRG00000013482	URB1	91	74.113	ENSTTRG00000007712	URB1	92	74.322	Tursiops_truncatus
ENSOPRG00000013482	URB1	99	73.143	ENSUAMG00000012231	URB1	99	73.143	Ursus_americanus
ENSOPRG00000013482	URB1	94	73.743	ENSUMAG00000017419	URB1	99	73.743	Ursus_maritimus
ENSOPRG00000013482	URB1	68	87.302	ENSVPAG00000001164	URB1	67	87.302	Vicugna_pacos
ENSOPRG00000013482	URB1	99	72.683	ENSVVUG00000000551	URB1	99	72.683	Vulpes_vulpes
ENSOPRG00000013482	URB1	99	47.780	ENSXETG00000009895	urb1	99	47.339	Xenopus_tropicalis
ENSOPRG00000013482	URB1	99	39.770	ENSXCOG00000005500	urb1	97	44.249	Xiphophorus_couchianus
ENSOPRG00000013482	URB1	99	39.920	ENSXMAG00000007253	urb1	99	40.107	Xiphophorus_maculatus