EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000013523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 89406 bases
Position: chrGeneScaffold_2177:1013-90418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000012342	KH_1	PF00013.29	1.3e-06	1	1
ENSOPRP00000012342	DEAD	PF00270.29	2.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000013525	-	1683	-	ENSOPRP00000012342	560 (aa)	-	UPI00017767A6

Gene Model

Click here to download ENSOPRG00000013523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000013523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000013523	-	56	48.101	ENSOPRG00000016604	DDX41	53	48.101
ENSOPRG00000013523	-	50	37.500	ENSOPRG00000011923	DDX39B	67	37.500
ENSOPRG00000013523	-	61	50.000	ENSOPRG00000008204	DDX5	55	46.809
ENSOPRG00000013523	-	51	41.748	ENSOPRG00000003824	DDX49	62	41.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000013523	-	86	79.464	ENSAMEG00000007851	-	74	79.464	Ailuropoda_melanoleuca
ENSOPRG00000013523	-	86	86.607	ENSBTAG00000021814	-	74	86.607	Bos_taurus
ENSOPRG00000013523	-	86	80.357	ENSCAFG00020002717	-	73	80.357	Canis_lupus_dingo
ENSOPRG00000013523	-	86	81.250	ENSCAFG00020010029	-	75	81.250	Canis_lupus_dingo
ENSOPRG00000013523	-	86	86.607	ENSCHIG00000017351	-	74	86.607	Capra_hircus
ENSOPRG00000013523	-	66	89.286	ENSCAPG00000004247	-	72	89.286	Cavia_aperea
ENSOPRG00000013523	-	86	89.286	ENSCPOG00000003991	-	75	89.286	Cavia_porcellus
ENSOPRG00000013523	-	85	90.179	ENSCLAG00000010261	-	73	90.179	Chinchilla_lanigera
ENSOPRG00000013523	-	55	84.821	ENSCHOG00000003450	-	54	84.821	Choloepus_hoffmanni
ENSOPRG00000013523	-	86	89.286	ENSCGRG00001001145	Ddx43	75	89.286	Cricetulus_griseus_chok1gshd
ENSOPRG00000013523	-	86	89.286	ENSCGRG00000010217	Ddx43	86	89.286	Cricetulus_griseus_crigri
ENSOPRG00000013523	-	86	88.393	ENSDNOG00000017589	-	74	88.393	Dasypus_novemcinctus
ENSOPRG00000013523	-	86	88.393	ENSDORG00000030010	Ddx43	75	88.393	Dipodomys_ordii
ENSOPRG00000013523	-	86	86.607	ENSEASG00005004346	-	68	86.607	Equus_asinus_asinus
ENSOPRG00000013523	-	86	86.607	ENSECAG00000017971	DDX43	75	86.607	Equus_caballus
ENSOPRG00000013523	-	86	81.250	ENSFCAG00000031631	-	74	81.250	Felis_catus
ENSOPRG00000013523	-	86	87.500	ENSHGLG00000001118	-	86	87.500	Heterocephalus_glaber_female
ENSOPRG00000013523	-	86	87.500	ENSHGLG00100011895	-	76	87.500	Heterocephalus_glaber_male
ENSOPRG00000013523	-	81	89.286	ENSSTOG00000032538	-	84	89.286	Ictidomys_tridecemlineatus
ENSOPRG00000013523	-	86	83.929	ENSJJAG00000014184	Ddx43	75	83.929	Jaculus_jaculus
ENSOPRG00000013523	-	86	86.607	ENSLAFG00000012755	-	80	86.607	Loxodonta_africana
ENSOPRG00000013523	-	86	88.393	ENSMAUG00000001441	Ddx43	75	88.393	Mesocricetus_auratus
ENSOPRG00000013523	-	76	86.607	ENSMOCG00000012956	Ddx43	67	86.607	Microtus_ochrogaster
ENSOPRG00000013523	-	86	88.393	MGP_CAROLIEiJ_G0032467	Ddx43	75	88.393	Mus_caroli
ENSOPRG00000013523	-	86	90.179	ENSMUSG00000070291	Ddx43	75	90.179	Mus_musculus
ENSOPRG00000013523	-	66	90.179	MGP_PahariEiJ_G0015333	Ddx43	65	90.179	Mus_pahari
ENSOPRG00000013523	-	86	90.179	MGP_SPRETEiJ_G0033607	Ddx43	75	90.179	Mus_spretus
ENSOPRG00000013523	-	86	82.143	ENSMPUG00000004342	-	75	82.143	Mustela_putorius_furo
ENSOPRG00000013523	-	86	86.607	ENSMLUG00000017604	-	75	86.607	Myotis_lucifugus
ENSOPRG00000013523	-	86	85.714	ENSNGAG00000015102	Ddx43	75	85.714	Nannospalax_galili
ENSOPRG00000013523	-	72	85.586	ENSODEG00000016207	-	75	85.586	Octodon_degus
ENSOPRG00000013523	-	86	89.286	ENSOCUG00000006338	-	75	89.286	Oryctolagus_cuniculus
ENSOPRG00000013523	-	84	85.000	ENSOCUG00000025811	-	72	85.000	Oryctolagus_cuniculus
ENSOPRG00000013523	-	86	86.607	ENSOARG00000010873	-	74	86.607	Ovis_aries
ENSOPRG00000013523	-	86	81.250	ENSPTIG00000017842	-	74	81.250	Panthera_tigris_altaica
ENSOPRG00000013523	-	86	88.393	ENSPEMG00000023986	Ddx43	86	88.393	Peromyscus_maniculatus_bairdii
ENSOPRG00000013523	-	85	83.929	ENSPCAG00000005962	-	74	83.929	Procavia_capensis
ENSOPRG00000013523	-	86	87.500	ENSPVAG00000012718	-	86	87.500	Pteropus_vampyrus
ENSOPRG00000013523	-	86	91.071	ENSRNOG00000050868	Ddx43	75	91.071	Rattus_norvegicus
ENSOPRG00000013523	-	81	83.186	ENSSARG00000013493	-	84	83.186	Sorex_araneus
ENSOPRG00000013523	-	86	84.821	ENSSSCG00000004287	-	74	84.821	Sus_scrofa
ENSOPRG00000013523	-	86	62.534	ENSTTRG00000001488	-	85	62.534	Tursiops_truncatus
ENSOPRG00000013523	-	61	66.286	ENSUAMG00000012894	-	54	66.286	Ursus_americanus
ENSOPRG00000013523	-	86	78.571	ENSUMAG00000012291	-	75	78.571	Ursus_maritimus
ENSOPRG00000013523	-	71	86.207	ENSVPAG00000004969	-	65	86.207	Vicugna_pacos
ENSOPRG00000013523	-	86	82.143	ENSVVUG00000013908	-	75	82.143	Vulpes_vulpes