EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000013822 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 68288 bases
Position: chrGeneScaffold_2210:475658-543945
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000012640	SpoU_methylase	PF00588.19	8.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000013854	TARBP1-201	4839	-	ENSOPRP00000012640	1613 (aa)	-	UPI0001779024

Gene Model

Click here to download ENSOPRG00000013822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000013822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000013822	TARBP1	71	86.401	ENSG00000059588	TARBP1	71	86.401	Homo_sapiens
ENSOPRG00000013822	TARBP1	68	53.078	ENSAPOG00000016419	si:dkey-85a20.4	68	53.078	Acanthochromis_polyacanthus
ENSOPRG00000013822	TARBP1	68	84.787	ENSAMEG00000003359	TARBP1	80	84.787	Ailuropoda_melanoleuca
ENSOPRG00000013822	TARBP1	68	52.745	ENSATEG00000020266	si:dkey-85a20.4	68	52.745	Anabas_testudineus
ENSOPRG00000013822	TARBP1	67	74.167	ENSAPLG00000007666	TARBP1	79	74.167	Anas_platyrhynchos
ENSOPRG00000013822	TARBP1	68	65.058	ENSACAG00000001142	TARBP1	72	65.058	Anolis_carolinensis
ENSOPRG00000013822	TARBP1	70	86.235	ENSANAG00000022031	TARBP1	73	86.235	Aotus_nancymaae
ENSOPRG00000013822	TARBP1	71	84.526	ENSBTAG00000004517	TARBP1	71	84.526	Bos_taurus
ENSOPRG00000013822	TARBP1	71	85.406	ENSCJAG00000018155	TARBP1	71	85.406	Callithrix_jacchus
ENSOPRG00000013822	TARBP1	71	83.775	ENSCAFG00000011533	TARBP1	81	84.053	Canis_familiaris
ENSOPRG00000013822	TARBP1	71	84.219	ENSCAFG00020027141	TARBP1	71	84.219	Canis_lupus_dingo
ENSOPRG00000013822	TARBP1	71	84.375	ENSCHIG00000011437	TARBP1	71	84.375	Capra_hircus
ENSOPRG00000013822	TARBP1	64	86.733	ENSTSYG00000010382	TARBP1	77	86.733	Carlito_syrichta
ENSOPRG00000013822	TARBP1	62	72.727	ENSCAPG00000010831	TARBP1	78	72.817	Cavia_aperea
ENSOPRG00000013822	TARBP1	70	78.415	ENSCPOG00000013995	TARBP1	72	78.383	Cavia_porcellus
ENSOPRG00000013822	TARBP1	71	86.401	ENSCCAG00000037278	TARBP1	73	86.288	Cebus_capucinus
ENSOPRG00000013822	TARBP1	71	86.401	ENSCATG00000011754	TARBP1	74	86.401	Cercocebus_atys
ENSOPRG00000013822	TARBP1	64	81.336	ENSCLAG00000003655	TARBP1	77	81.336	Chinchilla_lanigera
ENSOPRG00000013822	TARBP1	63	86.401	ENSCSAG00000010100	TARBP1	79	86.401	Chlorocebus_sabaeus
ENSOPRG00000013822	TARBP1	61	73.518	ENSCPBG00000005587	TARBP1	69	73.518	Chrysemys_picta_bellii
ENSOPRG00000013822	TARBP1	67	86.401	ENSCANG00000034343	TARBP1	80	86.401	Colobus_angolensis_palliatus
ENSOPRG00000013822	TARBP1	71	80.263	ENSCGRG00001016690	Tarbp1	72	80.263	Cricetulus_griseus_chok1gshd
ENSOPRG00000013822	TARBP1	71	80.263	ENSCGRG00000016893	Tarbp1	78	80.263	Cricetulus_griseus_crigri
ENSOPRG00000013822	TARBP1	69	50.500	ENSCSEG00000005255	si:dkey-85a20.4	75	51.414	Cynoglossus_semilaevis
ENSOPRG00000013822	TARBP1	70	51.959	ENSDARG00000079055	si:dkey-85a20.4	99	52.901	Danio_rerio
ENSOPRG00000013822	TARBP1	71	86.424	ENSDNOG00000008637	TARBP1	70	86.424	Dasypus_novemcinctus
ENSOPRG00000013822	TARBP1	63	76.690	ENSDORG00000007984	Tarbp1	79	76.690	Dipodomys_ordii
ENSOPRG00000013822	TARBP1	74	87.894	ENSEASG00005000252	TARBP1	75	87.894	Equus_asinus_asinus
ENSOPRG00000013822	TARBP1	74	87.728	ENSECAG00000023673	TARBP1	75	87.728	Equus_caballus
ENSOPRG00000013822	TARBP1	68	50.497	ENSELUG00000012193	si:dkey-85a20.4	71	50.497	Esox_lucius
ENSOPRG00000013822	TARBP1	71	83.416	ENSFCAG00000014183	TARBP1	74	83.416	Felis_catus
ENSOPRG00000013822	TARBP1	63	73.277	ENSFALG00000013565	TARBP1	79	73.045	Ficedula_albicollis
ENSOPRG00000013822	TARBP1	63	81.327	ENSFDAG00000001308	TARBP1	81	81.327	Fukomys_damarensis
ENSOPRG00000013822	TARBP1	67	50.000	ENSFHEG00000007565	si:dkey-85a20.4	68	50.000	Fundulus_heteroclitus
ENSOPRG00000013822	TARBP1	67	50.326	ENSGMOG00000004549	si:dkey-85a20.4	80	50.489	Gadus_morhua
ENSOPRG00000013822	TARBP1	71	69.435	ENSGALG00000011000	TARBP1	70	69.435	Gallus_gallus
ENSOPRG00000013822	TARBP1	69	52.990	ENSGAFG00000007387	si:dkey-85a20.4	68	52.990	Gambusia_affinis
ENSOPRG00000013822	TARBP1	68	52.579	ENSGACG00000005865	si:dkey-85a20.4	79	52.745	Gasterosteus_aculeatus
ENSOPRG00000013822	TARBP1	70	75.208	ENSGAGG00000012102	TARBP1	73	75.208	Gopherus_agassizii
ENSOPRG00000013822	TARBP1	68	86.585	ENSGGOG00000022879	TARBP1	79	86.585	Gorilla_gorilla
ENSOPRG00000013822	TARBP1	68	54.077	ENSHBUG00000008877	si:dkey-85a20.4	68	54.077	Haplochromis_burtoni
ENSOPRG00000013822	TARBP1	71	80.367	ENSHGLG00000011592	TARBP1	72	80.367	Heterocephalus_glaber_female
ENSOPRG00000013822	TARBP1	70	79.699	ENSHGLG00100015169	TARBP1	78	79.699	Heterocephalus_glaber_male
ENSOPRG00000013822	TARBP1	69	52.365	ENSIPUG00000005249	si:dkey-85a20.4	68	52.365	Ictalurus_punctatus
ENSOPRG00000013822	TARBP1	69	76.771	ENSSTOG00000032291	TARBP1	81	76.771	Ictidomys_tridecemlineatus
ENSOPRG00000013822	TARBP1	70	75.453	ENSJJAG00000017840	Tarbp1	78	75.453	Jaculus_jaculus
ENSOPRG00000013822	TARBP1	58	51.429	ENSKMAG00000017546	si:dkey-85a20.4	68	51.933	Kryptolebias_marmoratus
ENSOPRG00000013822	TARBP1	57	52.545	ENSLBEG00000012132	si:dkey-85a20.4	70	52.545	Labrus_bergylta
ENSOPRG00000013822	TARBP1	70	62.355	ENSLACG00000004337	TARBP1	69	62.355	Latimeria_chalumnae
ENSOPRG00000013822	TARBP1	67	57.983	ENSLOCG00000016214	si:dkey-85a20.4	67	57.983	Lepisosteus_oculatus
ENSOPRG00000013822	TARBP1	71	86.190	ENSLAFG00000011394	TARBP1	74	86.190	Loxodonta_africana
ENSOPRG00000013822	TARBP1	71	86.567	ENSMFAG00000041068	TARBP1	75	86.567	Macaca_fascicularis
ENSOPRG00000013822	TARBP1	71	86.567	ENSMMUG00000021703	TARBP1	74	86.567	Macaca_mulatta
ENSOPRG00000013822	TARBP1	71	86.567	ENSMNEG00000045002	TARBP1	74	86.567	Macaca_nemestrina
ENSOPRG00000013822	TARBP1	67	86.567	ENSMLEG00000044182	TARBP1	80	86.567	Mandrillus_leucophaeus
ENSOPRG00000013822	TARBP1	68	53.833	ENSMAMG00000021760	si:dkey-85a20.4	69	53.833	Mastacembelus_armatus
ENSOPRG00000013822	TARBP1	68	53.910	ENSMZEG00005005751	si:dkey-85a20.4	68	53.910	Maylandia_zebra
ENSOPRG00000013822	TARBP1	71	80.592	ENSMAUG00000020968	Tarbp1	73	80.592	Mesocricetus_auratus
ENSOPRG00000013822	TARBP1	71	74.080	ENSMICG00000015280	TARBP1	69	74.247	Microcebus_murinus
ENSOPRG00000013822	TARBP1	71	79.407	ENSMOCG00000004128	Tarbp1	72	79.407	Microtus_ochrogaster
ENSOPRG00000013822	TARBP1	68	52.542	ENSMMOG00000007795	si:dkey-85a20.4	68	52.542	Mola_mola
ENSOPRG00000013822	TARBP1	70	77.365	ENSMODG00000008504	TARBP1	70	77.371	Monodelphis_domestica
ENSOPRG00000013822	TARBP1	68	53.469	ENSMALG00000002916	si:dkey-85a20.4	70	53.469	Monopterus_albus
ENSOPRG00000013822	TARBP1	71	78.089	MGP_CAROLIEiJ_G0031729	Tarbp1	81	78.652	Mus_caroli
ENSOPRG00000013822	TARBP1	71	78.254	ENSMUSG00000090290	Tarbp1	72	78.254	Mus_musculus
ENSOPRG00000013822	TARBP1	71	78.583	MGP_PahariEiJ_G0023326	Tarbp1	72	78.583	Mus_pahari
ENSOPRG00000013822	TARBP1	71	78.833	MGP_SPRETEiJ_G0032846	Tarbp1	72	78.833	Mus_spretus
ENSOPRG00000013822	TARBP1	60	83.444	ENSMPUG00000002802	TARBP1	79	83.444	Mustela_putorius_furo
ENSOPRG00000013822	TARBP1	68	76.898	ENSMLUG00000002414	TARBP1	80	76.898	Myotis_lucifugus
ENSOPRG00000013822	TARBP1	71	86.070	ENSNLEG00000002518	TARBP1	71	86.070	Nomascus_leucogenys
ENSOPRG00000013822	TARBP1	52	75.855	ENSMEUG00000011370	-	51	75.855	Notamacropus_eugenii
ENSOPRG00000013822	TARBP1	71	78.383	ENSODEG00000005238	TARBP1	74	78.383	Octodon_degus
ENSOPRG00000013822	TARBP1	68	54.229	ENSONIG00000009789	si:dkey-85a20.4	80	54.229	Oreochromis_niloticus
ENSOPRG00000013822	TARBP1	71	90.625	ENSOCUG00000017418	TARBP1	74	90.625	Oryctolagus_cuniculus
ENSOPRG00000013822	TARBP1	69	51.414	ENSORLG00000010529	si:dkey-85a20.4	68	51.414	Oryzias_latipes
ENSOPRG00000013822	TARBP1	69	51.248	ENSORLG00020019264	si:dkey-85a20.4	68	51.248	Oryzias_latipes_hni
ENSOPRG00000013822	TARBP1	69	50.993	ENSORLG00015003276	si:dkey-85a20.4	68	50.993	Oryzias_latipes_hsok
ENSOPRG00000013822	TARBP1	74	82.084	ENSOGAG00000002379	TARBP1	74	82.084	Otolemur_garnettii
ENSOPRG00000013822	TARBP1	71	84.818	ENSOARG00000003434	TARBP1	77	84.818	Ovis_aries
ENSOPRG00000013822	TARBP1	67	86.653	ENSPPAG00000028097	TARBP1	80	86.653	Pan_paniscus
ENSOPRG00000013822	TARBP1	69	85.738	ENSPPRG00000013561	TARBP1	77	85.738	Panthera_pardus
ENSOPRG00000013822	TARBP1	66	85.572	ENSPTIG00000009281	TARBP1	80	85.572	Panthera_tigris_altaica
ENSOPRG00000013822	TARBP1	71	86.070	ENSPTRG00000002124	TARBP1	71	86.070	Pan_troglodytes
ENSOPRG00000013822	TARBP1	71	86.401	ENSPANG00000021933	TARBP1	74	86.401	Papio_anubis
ENSOPRG00000013822	TARBP1	66	52.961	ENSPKIG00000016716	si:dkey-85a20.4	66	52.961	Paramormyrops_kingsleyae
ENSOPRG00000013822	TARBP1	62	75.042	ENSPSIG00000010699	TARBP1	79	75.042	Pelodiscus_sinensis
ENSOPRG00000013822	TARBP1	71	80.560	ENSPEMG00000006888	Tarbp1	76	80.560	Peromyscus_maniculatus_bairdii
ENSOPRG00000013822	TARBP1	62	82.653	ENSPCIG00000029710	TARBP1	67	82.653	Phascolarctos_cinereus
ENSOPRG00000013822	TARBP1	68	52.727	ENSPFOG00000013020	si:dkey-85a20.4	79	52.727	Poecilia_formosa
ENSOPRG00000013822	TARBP1	68	53.411	ENSPLAG00000006044	si:dkey-85a20.4	68	53.411	Poecilia_latipinna
ENSOPRG00000013822	TARBP1	68	53.245	ENSPMEG00000017857	si:dkey-85a20.4	68	53.245	Poecilia_mexicana
ENSOPRG00000013822	TARBP1	68	53.577	ENSPREG00000022753	si:dkey-85a20.4	68	53.577	Poecilia_reticulata
ENSOPRG00000013822	TARBP1	62	87.059	ENSPPYG00000000102	TARBP1	68	87.059	Pongo_abelii
ENSOPRG00000013822	TARBP1	59	73.540	ENSPCAG00000004808	TARBP1	60	73.588	Procavia_capensis
ENSOPRG00000013822	TARBP1	71	81.752	ENSPCOG00000005666	TARBP1	74	81.752	Propithecus_coquereli
ENSOPRG00000013822	TARBP1	72	72.425	ENSPVAG00000014798	TARBP1	72	72.924	Pteropus_vampyrus
ENSOPRG00000013822	TARBP1	66	54.090	ENSPNYG00000019135	si:dkey-85a20.4	67	54.090	Pundamilia_nyererei
ENSOPRG00000013822	TARBP1	71	71.927	ENSRNOG00000053574	Tarbp1	72	71.927	Rattus_norvegicus
ENSOPRG00000013822	TARBP1	69	86.401	ENSRBIG00000043362	TARBP1	76	86.401	Rhinopithecus_bieti
ENSOPRG00000013822	TARBP1	71	86.401	ENSRROG00000029527	TARBP1	77	86.401	Rhinopithecus_roxellana
ENSOPRG00000013822	TARBP1	69	86.545	ENSSBOG00000034503	TARBP1	80	86.545	Saimiri_boliviensis_boliviensis
ENSOPRG00000013822	TARBP1	65	78.246	ENSSHAG00000000013	TARBP1	79	78.405	Sarcophilus_harrisii
ENSOPRG00000013822	TARBP1	68	53.443	ENSSFOG00015002660	si:dkey-85a20.4	77	53.279	Scleropages_formosus
ENSOPRG00000013822	TARBP1	67	52.736	ENSSMAG00000007081	si:dkey-85a20.4	68	53.146	Scophthalmus_maximus
ENSOPRG00000013822	TARBP1	69	51.510	ENSSDUG00000023566	si:dkey-85a20.4	69	51.510	Seriola_dumerili
ENSOPRG00000013822	TARBP1	69	54.013	ENSSLDG00000020200	si:dkey-85a20.4	69	54.013	Seriola_lalandi_dorsalis
ENSOPRG00000013822	TARBP1	59	81.250	ENSSARG00000012207	TARBP1	59	81.250	Sorex_araneus
ENSOPRG00000013822	TARBP1	68	73.632	ENSSPUG00000015364	TARBP1	70	73.632	Sphenodon_punctatus
ENSOPRG00000013822	TARBP1	68	53.245	ENSSPAG00000007213	si:dkey-85a20.4	68	53.245	Stegastes_partitus
ENSOPRG00000013822	TARBP1	74	86.522	ENSSSCG00000010160	TARBP1	74	86.522	Sus_scrofa
ENSOPRG00000013822	TARBP1	64	72.955	ENSTGUG00000010214	TARBP1	79	72.955	Taeniopygia_guttata
ENSOPRG00000013822	TARBP1	67	53.202	ENSTNIG00000016586	si:dkey-85a20.4	80	53.202	Tetraodon_nigroviridis
ENSOPRG00000013822	TARBP1	64	84.601	ENSTTRG00000008707	TARBP1	67	84.601	Tursiops_truncatus
ENSOPRG00000013822	TARBP1	65	83.850	ENSUMAG00000006730	TARBP1	79	83.850	Ursus_maritimus
ENSOPRG00000013822	TARBP1	57	90.099	ENSVPAG00000007665	TARBP1	64	90.099	Vicugna_pacos
ENSOPRG00000013822	TARBP1	70	84.053	ENSVVUG00000007460	TARBP1	80	84.053	Vulpes_vulpes
ENSOPRG00000013822	TARBP1	67	58.706	ENSXETG00000016224	tarbp1	80	58.706	Xenopus_tropicalis
ENSOPRG00000013822	TARBP1	68	51.695	ENSXCOG00000011779	si:dkey-85a20.4	81	51.695	Xiphophorus_couchianus