EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000013916 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 114725 bases
Position: chrGeneScaffold_3424:212774-327498
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000012709	ResIII	PF04851.15	5.1e-11	1	1
ENSOPRP00000012709	DEAD	PF00270.29	2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000013928	HFM1-201	4281	-	ENSOPRP00000012709	1426 (aa)	-	UPI00017A2643

Gene Model

Click here to download ENSOPRG00000013916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000013916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000013916	HFM1	58	32.630	ENSOPRG00000015464	SNRNP200	74	32.630

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000013916	HFM1	84	78.675	ENSG00000162669	HFM1	84	78.675	Homo_sapiens
ENSOPRG00000013916	HFM1	58	61.244	ENSAPOG00000005304	hfm1	94	61.244	Acanthochromis_polyacanthus
ENSOPRG00000013916	HFM1	84	77.249	ENSAMEG00000000432	HFM1	84	77.249	Ailuropoda_melanoleuca
ENSOPRG00000013916	HFM1	57	62.069	ENSACIG00000021553	hfm1	75	62.069	Amphilophus_citrinellus
ENSOPRG00000013916	HFM1	58	61.151	ENSAOCG00000022839	hfm1	96	62.169	Amphiprion_ocellaris
ENSOPRG00000013916	HFM1	58	60.791	ENSAPEG00000014316	hfm1	96	62.073	Amphiprion_percula
ENSOPRG00000013916	HFM1	58	62.260	ENSATEG00000019181	hfm1	68	61.282	Anabas_testudineus
ENSOPRG00000013916	HFM1	82	66.983	ENSAPLG00000013639	HFM1	83	66.983	Anas_platyrhynchos
ENSOPRG00000013916	HFM1	84	75.078	ENSANAG00000029513	HFM1	84	75.078	Aotus_nancymaae
ENSOPRG00000013916	HFM1	58	61.138	ENSACLG00000009033	hfm1	97	59.952	Astatotilapia_calliptera
ENSOPRG00000013916	HFM1	60	61.175	ENSAMXG00000006108	hfm1	60	61.175	Astyanax_mexicanus
ENSOPRG00000013916	HFM1	84	75.698	ENSBTAG00000020856	HFM1	84	75.698	Bos_taurus
ENSOPRG00000013916	HFM1	84	77.847	ENSCJAG00000001843	HFM1	84	77.847	Callithrix_jacchus
ENSOPRG00000013916	HFM1	84	76.732	ENSCAFG00000020187	HFM1	84	76.732	Canis_familiaris
ENSOPRG00000013916	HFM1	84	77.559	ENSTSYG00000014250	HFM1	84	77.559	Carlito_syrichta
ENSOPRG00000013916	HFM1	84	75.726	ENSCPOG00000007421	HFM1	84	75.726	Cavia_porcellus
ENSOPRG00000013916	HFM1	84	77.433	ENSCCAG00000033206	HFM1	84	77.433	Cebus_capucinus
ENSOPRG00000013916	HFM1	84	78.261	ENSCATG00000030987	HFM1	84	78.261	Cercocebus_atys
ENSOPRG00000013916	HFM1	84	75.983	ENSCLAG00000005173	HFM1	84	75.983	Chinchilla_lanigera
ENSOPRG00000013916	HFM1	56	92.105	ENSCHOG00000011824	-	64	92.105	Choloepus_hoffmanni
ENSOPRG00000013916	HFM1	84	70.093	ENSCGRG00001016995	Hfm1	84	70.093	Cricetulus_griseus_chok1gshd
ENSOPRG00000013916	HFM1	84	73.444	ENSCGRG00000017181	Hfm1	84	73.444	Cricetulus_griseus_crigri
ENSOPRG00000013916	HFM1	58	60.864	ENSCSEG00000017659	hfm1	77	60.864	Cynoglossus_semilaevis
ENSOPRG00000013916	HFM1	50	61.290	ENSCVAG00000005075	hfm1	86	61.290	Cyprinodon_variegatus
ENSOPRG00000013916	HFM1	59	60.932	ENSDARG00000104288	hfm1	76	60.932	Danio_rerio
ENSOPRG00000013916	HFM1	84	75.595	ENSDNOG00000004776	HFM1	84	75.595	Dasypus_novemcinctus
ENSOPRG00000013916	HFM1	84	74.262	ENSDORG00000014661	Hfm1	84	74.262	Dipodomys_ordii
ENSOPRG00000013916	HFM1	63	82.080	ENSEASG00005015424	HFM1	90	82.080	Equus_asinus_asinus
ENSOPRG00000013916	HFM1	84	77.720	ENSECAG00000024039	HFM1	84	77.720	Equus_caballus
ENSOPRG00000013916	HFM1	61	61.397	ENSELUG00000018944	hfm1	92	62.455	Esox_lucius
ENSOPRG00000013916	HFM1	84	76.422	ENSFCAG00000029116	HFM1	84	76.422	Felis_catus
ENSOPRG00000013916	HFM1	82	66.040	ENSFALG00000001781	HFM1	82	66.040	Ficedula_albicollis
ENSOPRG00000013916	HFM1	84	76.294	ENSFDAG00000020816	HFM1	84	76.294	Fukomys_damarensis
ENSOPRG00000013916	HFM1	58	57.863	ENSGMOG00000017436	hfm1	86	57.863	Gadus_morhua
ENSOPRG00000013916	HFM1	57	62.424	ENSGAFG00000018093	hfm1	93	60.990	Gambusia_affinis
ENSOPRG00000013916	HFM1	59	59.211	ENSGACG00000015686	hfm1	86	59.211	Gasterosteus_aculeatus
ENSOPRG00000013916	HFM1	84	78.675	ENSGGOG00000038524	HFM1	84	78.675	Gorilla_gorilla
ENSOPRG00000013916	HFM1	58	62.107	ENSHBUG00000007309	hfm1	79	62.107	Haplochromis_burtoni
ENSOPRG00000013916	HFM1	57	59.755	ENSHCOG00000019632	hfm1	97	59.755	Hippocampus_comes
ENSOPRG00000013916	HFM1	60	60.844	ENSIPUG00000017020	hfm1	92	60.142	Ictalurus_punctatus
ENSOPRG00000013916	HFM1	84	74.638	ENSJJAG00000017198	Hfm1	84	74.638	Jaculus_jaculus
ENSOPRG00000013916	HFM1	60	59.091	ENSKMAG00000002282	hfm1	90	58.804	Kryptolebias_marmoratus
ENSOPRG00000013916	HFM1	60	58.661	ENSLBEG00000006759	hfm1	98	58.661	Labrus_bergylta
ENSOPRG00000013916	HFM1	60	65.425	ENSLACG00000010698	HFM1	81	65.541	Latimeria_chalumnae
ENSOPRG00000013916	HFM1	60	63.731	ENSLOCG00000004931	hfm1	80	63.731	Lepisosteus_oculatus
ENSOPRG00000013916	HFM1	52	76.478	ENSLAFG00000015903	-	100	76.478	Loxodonta_africana
ENSOPRG00000013916	HFM1	84	76.670	ENSMFAG00000003649	HFM1	84	76.670	Macaca_fascicularis
ENSOPRG00000013916	HFM1	84	78.054	ENSMMUG00000006819	HFM1	84	78.054	Macaca_mulatta
ENSOPRG00000013916	HFM1	58	61.017	ENSMAMG00000004623	hfm1	97	61.017	Mastacembelus_armatus
ENSOPRG00000013916	HFM1	58	61.138	ENSMZEG00005004679	hfm1	97	59.952	Maylandia_zebra
ENSOPRG00000013916	HFM1	54	69.935	ENSMGAG00000008437	HFM1	96	69.935	Meleagris_gallopavo
ENSOPRG00000013916	HFM1	84	74.455	ENSMAUG00000018858	Hfm1	84	74.455	Mesocricetus_auratus
ENSOPRG00000013916	HFM1	84	77.663	ENSMICG00000037935	HFM1	84	77.663	Microcebus_murinus
ENSOPRG00000013916	HFM1	84	73.077	ENSMOCG00000014812	Hfm1	84	73.077	Microtus_ochrogaster
ENSOPRG00000013916	HFM1	60	59.444	ENSMMOG00000006148	hfm1	96	59.444	Mola_mola
ENSOPRG00000013916	HFM1	57	63.469	ENSMALG00000002401	hfm1	94	62.094	Monopterus_albus
ENSOPRG00000013916	HFM1	78	69.774	MGP_CAROLIEiJ_G0027496	Hfm1	83	69.774	Mus_caroli
ENSOPRG00000013916	HFM1	84	72.360	ENSMUSG00000043410	Hfm1	84	72.360	Mus_musculus
ENSOPRG00000013916	HFM1	84	73.105	MGP_PahariEiJ_G0017268	Hfm1	84	74.228	Mus_pahari
ENSOPRG00000013916	HFM1	84	72.464	MGP_SPRETEiJ_G0028495	Hfm1	84	72.464	Mus_spretus
ENSOPRG00000013916	HFM1	84	76.860	ENSMPUG00000004594	HFM1	84	76.860	Mustela_putorius_furo
ENSOPRG00000013916	HFM1	84	76.112	ENSMLUG00000010200	HFM1	84	76.112	Myotis_lucifugus
ENSOPRG00000013916	HFM1	58	60.485	ENSNBRG00000002910	hfm1	97	60.485	Neolamprologus_brichardi
ENSOPRG00000013916	HFM1	84	76.501	ENSNLEG00000010285	HFM1	84	76.501	Nomascus_leucogenys
ENSOPRG00000013916	HFM1	61	74.054	ENSMEUG00000015788	HFM1	61	74.054	Notamacropus_eugenii
ENSOPRG00000013916	HFM1	59	61.657	ENSONIG00000010590	hfm1	81	61.657	Oreochromis_niloticus
ENSOPRG00000013916	HFM1	57	60.640	ENSORLG00000026844	hfm1	99	60.640	Oryzias_latipes
ENSOPRG00000013916	HFM1	61	52.511	ENSORLG00020002951	hfm1	67	53.638	Oryzias_latipes_hni
ENSOPRG00000013916	HFM1	60	61.059	ENSOMEG00000016474	hfm1	59	61.059	Oryzias_melastigma
ENSOPRG00000013916	HFM1	68	77.399	ENSOGAG00000032369	HFM1	79	77.399	Otolemur_garnettii
ENSOPRG00000013916	HFM1	84	75.801	ENSOARG00000015812	HFM1	84	75.801	Ovis_aries
ENSOPRG00000013916	HFM1	77	78.675	ENSPPAG00000024582	HFM1	83	78.675	Pan_paniscus
ENSOPRG00000013916	HFM1	84	76.525	ENSPPRG00000003270	HFM1	84	76.525	Panthera_pardus
ENSOPRG00000013916	HFM1	84	76.422	ENSPTIG00000018881	HFM1	84	76.422	Panthera_tigris_altaica
ENSOPRG00000013916	HFM1	84	78.778	ENSPTRG00000000948	HFM1	84	78.778	Pan_troglodytes
ENSOPRG00000013916	HFM1	84	78.364	ENSPANG00000009838	HFM1	84	78.364	Papio_anubis
ENSOPRG00000013916	HFM1	60	61.988	ENSPKIG00000003810	hfm1	95	62.394	Paramormyrops_kingsleyae
ENSOPRG00000013916	HFM1	58	59.976	ENSPMGG00000011059	hfm1	100	59.976	Periophthalmus_magnuspinnatus
ENSOPRG00000013916	HFM1	84	74.534	ENSPEMG00000022852	Hfm1	84	74.534	Peromyscus_maniculatus_bairdii
ENSOPRG00000013916	HFM1	82	70.370	ENSPCIG00000014233	HFM1	83	70.370	Phascolarctos_cinereus
ENSOPRG00000013916	HFM1	60	61.782	ENSPFOG00000017194	hfm1	81	61.782	Poecilia_formosa
ENSOPRG00000013916	HFM1	58	63.177	ENSPLAG00000000571	hfm1	76	63.177	Poecilia_latipinna
ENSOPRG00000013916	HFM1	60	61.772	ENSPMEG00000019475	hfm1	79	61.772	Poecilia_mexicana
ENSOPRG00000013916	HFM1	58	62.228	ENSPREG00000007803	hfm1	93	60.580	Poecilia_reticulata
ENSOPRG00000013916	HFM1	84	78.986	ENSPPYG00000001163	HFM1	84	78.986	Pongo_abelii
ENSOPRG00000013916	HFM1	53	81.579	ENSPCAG00000004289	-	53	81.579	Procavia_capensis
ENSOPRG00000013916	HFM1	81	80.064	ENSPVAG00000009713	HFM1	81	80.064	Pteropus_vampyrus
ENSOPRG00000013916	HFM1	58	61.017	ENSPNYG00000001795	hfm1	97	59.952	Pundamilia_nyererei
ENSOPRG00000013916	HFM1	59	61.765	ENSPNAG00000010865	hfm1	84	61.765	Pygocentrus_nattereri
ENSOPRG00000013916	HFM1	83	73.881	ENSRNOG00000023299	Hfm1	84	73.881	Rattus_norvegicus
ENSOPRG00000013916	HFM1	84	78.364	ENSRROG00000045569	HFM1	84	78.364	Rhinopithecus_roxellana
ENSOPRG00000013916	HFM1	84	77.226	ENSSBOG00000027456	HFM1	84	77.226	Saimiri_boliviensis_boliviensis
ENSOPRG00000013916	HFM1	60	62.674	ENSSFOG00015020129	hfm1	57	62.674	Scleropages_formosus
ENSOPRG00000013916	HFM1	58	61.722	ENSSMAG00000006907	hfm1	82	61.356	Scophthalmus_maximus
ENSOPRG00000013916	HFM1	58	61.185	ENSSDUG00000011424	hfm1	93	61.185	Seriola_dumerili
ENSOPRG00000013916	HFM1	58	61.325	ENSSLDG00000016386	hfm1	92	61.325	Seriola_lalandi_dorsalis
ENSOPRG00000013916	HFM1	60	60.465	ENSSPAG00000001023	hfm1	96	60.465	Stegastes_partitus
ENSOPRG00000013916	HFM1	84	76.525	ENSSSCG00000006912	HFM1	87	76.525	Sus_scrofa
ENSOPRG00000013916	HFM1	60	69.142	ENSTGUG00000006172	HFM1	90	69.142	Taeniopygia_guttata
ENSOPRG00000013916	HFM1	84	76.319	ENSTTRG00000013933	HFM1	84	76.319	Tursiops_truncatus
ENSOPRG00000013916	HFM1	84	74.457	ENSVPAG00000011331	HFM1	84	74.457	Vicugna_pacos
ENSOPRG00000013916	HFM1	64	80.542	ENSVVUG00000020760	HFM1	93	80.542	Vulpes_vulpes
ENSOPRG00000013916	HFM1	58	60.943	ENSXMAG00000004178	hfm1	92	60.943	Xiphophorus_maculatus