EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000013942 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 35744 bases
Position: chrGeneScaffold_3431:28290-64033
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000012758	EST1	PF10374.9	2.3e-25	1	1
ENSOPRP00000012758	EST1_DNA_bind	PF10373.9	2.6e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000013978	SMG7-201	3354	-	ENSOPRP00000012758	1118 (aa)	-	UPI00017A218F

Gene Model

Click here to download ENSOPRG00000013942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000013942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000013942	SMG7	96	84.475	ENSG00000116698	SMG7	99	87.268	Homo_sapiens
ENSOPRG00000013942	SMG7	70	68.966	ENSAPOG00000009611	smg7	92	69.545	Acanthochromis_polyacanthus
ENSOPRG00000013942	SMG7	96	78.684	ENSAMEG00000002357	SMG7	97	81.391	Ailuropoda_melanoleuca
ENSOPRG00000013942	SMG7	72	68.064	ENSACIG00000015152	smg7	97	56.323	Amphilophus_citrinellus
ENSOPRG00000013942	SMG7	92	69.274	ENSAOCG00000013538	smg7	96	59.829	Amphiprion_ocellaris
ENSOPRG00000013942	SMG7	96	57.772	ENSAPEG00000007851	smg7	96	59.693	Amphiprion_percula
ENSOPRG00000013942	SMG7	96	57.167	ENSATEG00000006931	smg7	96	57.804	Anabas_testudineus
ENSOPRG00000013942	SMG7	96	73.100	ENSAPLG00000015811	SMG7	96	73.537	Anas_platyrhynchos
ENSOPRG00000013942	SMG7	96	74.457	ENSACAG00000014989	SMG7	96	75.152	Anolis_carolinensis
ENSOPRG00000013942	SMG7	96	84.196	ENSANAG00000028114	SMG7	85	96.178	Aotus_nancymaae
ENSOPRG00000013942	SMG7	96	59.215	ENSACLG00000022079	smg7	96	59.620	Astatotilapia_calliptera
ENSOPRG00000013942	SMG7	96	62.009	ENSAMXG00000020809	smg7	96	62.042	Astyanax_mexicanus
ENSOPRG00000013942	SMG7	96	84.658	ENSBTAG00000008003	SMG7	94	84.932	Bos_taurus
ENSOPRG00000013942	SMG7	96	84.384	ENSCJAG00000005135	SMG7	86	96.178	Callithrix_jacchus
ENSOPRG00000013942	SMG7	96	84.826	ENSCAFG00000013276	SMG7	94	84.826	Canis_familiaris
ENSOPRG00000013942	SMG7	96	84.826	ENSCAFG00020015475	SMG7	84	97.419	Canis_lupus_dingo
ENSOPRG00000013942	SMG7	96	84.292	ENSCHIG00000018192	SMG7	96	84.566	Capra_hircus
ENSOPRG00000013942	SMG7	96	83.836	ENSTSYG00000002667	SMG7	99	80.548	Carlito_syrichta
ENSOPRG00000013942	SMG7	96	84.644	ENSCPOG00000008906	SMG7	96	83.729	Cavia_porcellus
ENSOPRG00000013942	SMG7	96	78.002	ENSCCAG00000028596	SMG7	85	96.178	Cebus_capucinus
ENSOPRG00000013942	SMG7	96	84.749	ENSCATG00000011063	SMG7	85	96.178	Cercocebus_atys
ENSOPRG00000013942	SMG7	96	84.384	ENSCLAG00000010751	SMG7	96	84.658	Chinchilla_lanigera
ENSOPRG00000013942	SMG7	96	84.749	ENSCSAG00000012654	SMG7	94	84.932	Chlorocebus_sabaeus
ENSOPRG00000013942	SMG7	95	75.357	ENSCHOG00000010522	SMG7	100	75.446	Choloepus_hoffmanni
ENSOPRG00000013942	SMG7	96	77.273	ENSCPBG00000015724	SMG7	96	77.535	Chrysemys_picta_bellii
ENSOPRG00000013942	SMG7	96	78.089	ENSCANG00000015680	SMG7	85	96.178	Colobus_angolensis_palliatus
ENSOPRG00000013942	SMG7	96	83.196	ENSCGRG00001013705	Smg7	96	83.653	Cricetulus_griseus_chok1gshd
ENSOPRG00000013942	SMG7	96	83.196	ENSCGRG00000018401	Smg7	95	83.653	Cricetulus_griseus_crigri
ENSOPRG00000013942	SMG7	95	57.686	ENSCVAG00000011842	smg7	96	61.350	Cyprinodon_variegatus
ENSOPRG00000013942	SMG7	96	61.478	ENSDARG00000060767	smg7	96	61.478	Danio_rerio
ENSOPRG00000013942	SMG7	96	84.018	ENSDORG00000007331	Smg7	96	84.292	Dipodomys_ordii
ENSOPRG00000013942	SMG7	96	83.836	ENSETEG00000002654	SMG7	99	84.201	Echinops_telfairi
ENSOPRG00000013942	SMG7	96	84.932	ENSEASG00005006524	SMG7	96	85.205	Equus_asinus_asinus
ENSOPRG00000013942	SMG7	90	96.341	ENSECAG00000004313	SMG7	93	96.061	Equus_caballus
ENSOPRG00000013942	SMG7	99	80.763	ENSEEUG00000002024	SMG7	96	81.593	Erinaceus_europaeus
ENSOPRG00000013942	SMG7	96	60.705	ENSELUG00000010293	smg7	99	60.533	Esox_lucius
ENSOPRG00000013942	SMG7	96	85.009	ENSFCAG00000010900	SMG7	96	86.250	Felis_catus
ENSOPRG00000013942	SMG7	95	74.159	ENSFALG00000003047	SMG7	97	74.425	Ficedula_albicollis
ENSOPRG00000013942	SMG7	96	84.095	ENSFDAG00000012121	SMG7	96	84.147	Fukomys_damarensis
ENSOPRG00000013942	SMG7	96	57.304	ENSFHEG00000011073	smg7	96	57.131	Fundulus_heteroclitus
ENSOPRG00000013942	SMG7	96	54.995	ENSGMOG00000004916	smg7	91	66.421	Gadus_morhua
ENSOPRG00000013942	SMG7	96	73.147	ENSGALG00000004667	SMG7	96	73.583	Gallus_gallus
ENSOPRG00000013942	SMG7	96	58.129	ENSGAFG00000019000	smg7	96	57.899	Gambusia_affinis
ENSOPRG00000013942	SMG7	96	60.830	ENSGACG00000001634	smg7	98	60.480	Gasterosteus_aculeatus
ENSOPRG00000013942	SMG7	96	84.384	ENSGGOG00000002342	SMG7	94	84.566	Gorilla_gorilla
ENSOPRG00000013942	SMG7	96	59.793	ENSHBUG00000003726	smg7	98	61.963	Haplochromis_burtoni
ENSOPRG00000013942	SMG7	95	83.502	ENSHGLG00000009353	SMG7	97	83.779	Heterocephalus_glaber_female
ENSOPRG00000013942	SMG7	95	81.751	ENSHGLG00100009637	-	97	82.028	Heterocephalus_glaber_male
ENSOPRG00000013942	SMG7	96	76.256	ENSHGLG00100004878	-	96	76.530	Heterocephalus_glaber_male
ENSOPRG00000013942	SMG7	96	62.105	ENSIPUG00000016997	smg7	96	61.558	Ictalurus_punctatus
ENSOPRG00000013942	SMG7	96	84.749	ENSSTOG00000000401	SMG7	96	85.023	Ictidomys_tridecemlineatus
ENSOPRG00000013942	SMG7	96	83.470	ENSJJAG00000012351	Smg7	96	83.744	Jaculus_jaculus
ENSOPRG00000013942	SMG7	93	54.756	ENSKMAG00000004900	smg7	97	54.354	Kryptolebias_marmoratus
ENSOPRG00000013942	SMG7	96	57.739	ENSLBEG00000002983	smg7	96	57.826	Labrus_bergylta
ENSOPRG00000013942	SMG7	96	68.186	ENSLACG00000000972	SMG7	96	69.335	Latimeria_chalumnae
ENSOPRG00000013942	SMG7	96	62.176	ENSLOCG00000002010	smg7	96	62.123	Lepisosteus_oculatus
ENSOPRG00000013942	SMG7	96	84.292	ENSLAFG00000008186	SMG7	96	84.566	Loxodonta_africana
ENSOPRG00000013942	SMG7	96	84.749	ENSMFAG00000031653	SMG7	85	96.178	Macaca_fascicularis
ENSOPRG00000013942	SMG7	96	84.749	ENSMMUG00000018458	SMG7	94	84.932	Macaca_mulatta
ENSOPRG00000013942	SMG7	96	78.177	ENSMNEG00000034798	SMG7	85	96.178	Macaca_nemestrina
ENSOPRG00000013942	SMG7	96	84.749	ENSMLEG00000037170	SMG7	94	84.932	Mandrillus_leucophaeus
ENSOPRG00000013942	SMG7	87	59.378	ENSMAMG00000018733	smg7	85	59.755	Mastacembelus_armatus
ENSOPRG00000013942	SMG7	96	59.845	ENSMZEG00005015247	smg7	96	59.448	Maylandia_zebra
ENSOPRG00000013942	SMG7	96	73.211	ENSMGAG00000001561	SMG7	96	73.647	Meleagris_gallopavo
ENSOPRG00000013942	SMG7	96	83.744	ENSMAUG00000019484	Smg7	96	84.018	Mesocricetus_auratus
ENSOPRG00000013942	SMG7	96	85.009	ENSMICG00000007145	SMG7	95	85.009	Microcebus_murinus
ENSOPRG00000013942	SMG7	96	83.836	ENSMOCG00000020748	Smg7	96	84.110	Microtus_ochrogaster
ENSOPRG00000013942	SMG7	89	61.728	ENSMMOG00000001524	smg7	93	61.728	Mola_mola
ENSOPRG00000013942	SMG7	91	76.007	ENSMODG00000007139	SMG7	99	76.282	Monodelphis_domestica
ENSOPRG00000013942	SMG7	96	59.008	ENSMALG00000000061	smg7	88	62.430	Monopterus_albus
ENSOPRG00000013942	SMG7	96	83.653	MGP_CAROLIEiJ_G0014704	Smg7	96	83.836	Mus_caroli
ENSOPRG00000013942	SMG7	96	83.470	ENSMUSG00000042772	Smg7	96	83.744	Mus_musculus
ENSOPRG00000013942	SMG7	96	83.927	MGP_PahariEiJ_G0027940	Smg7	96	84.201	Mus_pahari
ENSOPRG00000013942	SMG7	96	83.562	MGP_SPRETEiJ_G0015511	Smg7	96	83.836	Mus_spretus
ENSOPRG00000013942	SMG7	95	85.055	ENSMPUG00000011732	SMG7	94	85.055	Mustela_putorius_furo
ENSOPRG00000013942	SMG7	96	84.110	ENSMLUG00000015417	SMG7	96	84.384	Myotis_lucifugus
ENSOPRG00000013942	SMG7	96	84.095	ENSNGAG00000009836	Smg7	96	83.181	Nannospalax_galili
ENSOPRG00000013942	SMG7	95	53.940	ENSNBRG00000024343	smg7	96	54.137	Neolamprologus_brichardi
ENSOPRG00000013942	SMG7	96	84.566	ENSNLEG00000018018	SMG7	94	84.749	Nomascus_leucogenys
ENSOPRG00000013942	SMG7	77	72.277	ENSMEUG00000004681	SMG7	77	73.082	Notamacropus_eugenii
ENSOPRG00000013942	SMG7	96	84.201	ENSODEG00000010390	SMG7	96	84.475	Octodon_degus
ENSOPRG00000013942	SMG7	96	57.976	ENSONIG00000000277	smg7	96	58.196	Oreochromis_niloticus
ENSOPRG00000013942	SMG7	95	81.302	ENSOANG00000000994	SMG7	97	81.302	Ornithorhynchus_anatinus
ENSOPRG00000013942	SMG7	96	84.384	ENSOCUG00000005887	SMG7	89	84.658	Oryctolagus_cuniculus
ENSOPRG00000013942	SMG7	96	57.890	ENSORLG00000007314	smg7	70	92.715	Oryzias_latipes
ENSOPRG00000013942	SMG7	96	58.326	ENSORLG00020015779	smg7	70	92.105	Oryzias_latipes_hni
ENSOPRG00000013942	SMG7	96	60.526	ENSORLG00015012289	smg7	96	58.384	Oryzias_latipes_hsok
ENSOPRG00000013942	SMG7	96	58.471	ENSOMEG00000002328	smg7	96	58.471	Oryzias_melastigma
ENSOPRG00000013942	SMG7	99	81.148	ENSOGAG00000003107	SMG7	99	80.891	Otolemur_garnettii
ENSOPRG00000013942	SMG7	96	84.110	ENSOARG00000001352	SMG7	94	84.384	Ovis_aries
ENSOPRG00000013942	SMG7	96	78.002	ENSPPAG00000031619	SMG7	85	96.178	Pan_paniscus
ENSOPRG00000013942	SMG7	96	85.192	ENSPPRG00000011222	SMG7	98	81.670	Panthera_pardus
ENSOPRG00000013942	SMG7	99	81.967	ENSPTIG00000007242	SMG7	98	81.670	Panthera_tigris_altaica
ENSOPRG00000013942	SMG7	99	80.700	ENSPTRG00000001764	SMG7	85	96.178	Pan_troglodytes
ENSOPRG00000013942	SMG7	96	84.749	ENSPANG00000004520	SMG7	94	84.932	Papio_anubis
ENSOPRG00000013942	SMG7	96	60.280	ENSPKIG00000007242	smg7	96	62.500	Paramormyrops_kingsleyae
ENSOPRG00000013942	SMG7	96	80.274	ENSPSIG00000012201	SMG7	96	80.365	Pelodiscus_sinensis
ENSOPRG00000013942	SMG7	96	82.740	ENSPEMG00000011315	Smg7	96	83.014	Peromyscus_maniculatus_bairdii
ENSOPRG00000013942	SMG7	96	78.984	ENSPCIG00000003786	SMG7	87	96.154	Phascolarctos_cinereus
ENSOPRG00000013942	SMG7	96	58.742	ENSPFOG00000019219	smg7	96	58.298	Poecilia_formosa
ENSOPRG00000013942	SMG7	96	57.615	ENSPLAG00000001446	smg7	96	57.180	Poecilia_latipinna
ENSOPRG00000013942	SMG7	96	57.991	ENSPMEG00000005218	smg7	99	57.550	Poecilia_mexicana
ENSOPRG00000013942	SMG7	86	57.774	ENSPREG00000019039	smg7	91	58.333	Poecilia_reticulata
ENSOPRG00000013942	SMG7	96	78.089	ENSPPYG00000000427	SMG7	96	78.265	Pongo_abelii
ENSOPRG00000013942	SMG7	99	71.144	ENSPCAG00000008360	SMG7	100	70.948	Procavia_capensis
ENSOPRG00000013942	SMG7	96	85.192	ENSPCOG00000011996	SMG7	99	81.421	Propithecus_coquereli
ENSOPRG00000013942	SMG7	91	79.440	ENSPVAG00000000851	SMG7	89	79.730	Pteropus_vampyrus
ENSOPRG00000013942	SMG7	96	59.637	ENSPNYG00000007643	smg7	96	59.551	Pundamilia_nyererei
ENSOPRG00000013942	SMG7	96	61.465	ENSPNAG00000011374	smg7	96	60.603	Pygocentrus_nattereri
ENSOPRG00000013942	SMG7	96	83.668	ENSRNOG00000027962	Smg7	99	86.870	Rattus_norvegicus
ENSOPRG00000013942	SMG7	96	84.658	ENSRBIG00000036316	SMG7	94	84.840	Rhinopithecus_bieti
ENSOPRG00000013942	SMG7	96	84.658	ENSRROG00000035719	SMG7	96	84.840	Rhinopithecus_roxellana
ENSOPRG00000013942	SMG7	96	84.475	ENSSBOG00000023454	SMG7	85	96.178	Saimiri_boliviensis_boliviensis
ENSOPRG00000013942	SMG7	96	75.723	ENSSHAG00000013147	SMG7	96	75.832	Sarcophilus_harrisii
ENSOPRG00000013942	SMG7	96	62.740	ENSSFOG00015017252	smg7	93	68.627	Scleropages_formosus
ENSOPRG00000013942	SMG7	96	59.462	ENSSMAG00000006067	smg7	96	59.931	Scophthalmus_maximus
ENSOPRG00000013942	SMG7	92	68.524	ENSSDUG00000017543	smg7	96	57.818	Seriola_dumerili
ENSOPRG00000013942	SMG7	96	72.664	ENSSPUG00000002064	SMG7	96	72.838	Sphenodon_punctatus
ENSOPRG00000013942	SMG7	94	58.422	ENSSPAG00000008733	smg7	95	58.688	Stegastes_partitus
ENSOPRG00000013942	SMG7	96	84.840	ENSSSCG00000015558	SMG7	96	85.114	Sus_scrofa
ENSOPRG00000013942	SMG7	96	73.060	ENSTGUG00000003928	SMG7	97	73.322	Taeniopygia_guttata
ENSOPRG00000013942	SMG7	96	59.386	ENSTNIG00000002802	smg7	96	59.469	Tetraodon_nigroviridis
ENSOPRG00000013942	SMG7	80	81.545	ENSTBEG00000003220	SMG7	77	83.262	Tupaia_belangeri
ENSOPRG00000013942	SMG7	99	80.615	ENSTTRG00000014778	SMG7	100	80.786	Tursiops_truncatus
ENSOPRG00000013942	SMG7	93	81.527	ENSUAMG00000017473	SMG7	96	81.527	Ursus_americanus
ENSOPRG00000013942	SMG7	93	84.920	ENSUMAG00000016389	SMG7	97	84.920	Ursus_maritimus
ENSOPRG00000013942	SMG7	96	84.918	ENSVVUG00000008976	SMG7	96	87.500	Vulpes_vulpes
ENSOPRG00000013942	SMG7	96	61.212	ENSXETG00000012528	smg7	96	61.472	Xenopus_tropicalis
ENSOPRG00000013942	SMG7	96	58.494	ENSXMAG00000007123	smg7	96	58.231	Xiphophorus_maculatus