EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000014029 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 1808 bases
Position: chrGeneScaffold_4264:237092-238899
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000012796	Exo_endo_phos	PF03372.23	8.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000014020	APEX1-201	954	-	ENSOPRP00000012796	317 (aa)	-	UPI00017772A7

Gene Model

Click here to download ENSOPRG00000014029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000014029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000014029	APEX1	100	93.082	ENSG00000100823	APEX1	100	93.396	Homo_sapiens
ENSOPRG00000014029	APEX1	88	68.100	ENSAPOG00000017002	apex1	95	66.781	Acanthochromis_polyacanthus
ENSOPRG00000014029	APEX1	100	94.654	ENSAMEG00000005418	APEX1	100	95.283	Ailuropoda_melanoleuca
ENSOPRG00000014029	APEX1	88	70.144	ENSACIG00000010653	apex1	97	69.204	Amphilophus_citrinellus
ENSOPRG00000014029	APEX1	88	67.742	ENSAOCG00000009649	apex1	99	64.103	Amphiprion_ocellaris
ENSOPRG00000014029	APEX1	88	67.742	ENSAPEG00000021453	apex1	99	64.103	Amphiprion_percula
ENSOPRG00000014029	APEX1	99	66.984	ENSATEG00000002883	apex1	97	66.984	Anabas_testudineus
ENSOPRG00000014029	APEX1	100	68.847	ENSACAG00000008099	APEX1	100	69.565	Anolis_carolinensis
ENSOPRG00000014029	APEX1	100	93.396	ENSANAG00000030117	APEX1	100	93.711	Aotus_nancymaae
ENSOPRG00000014029	APEX1	87	69.928	ENSACLG00000018441	apex1	99	66.139	Astatotilapia_calliptera
ENSOPRG00000014029	APEX1	100	65.517	ENSAMXG00000034699	apex1	100	65.517	Astyanax_mexicanus
ENSOPRG00000014029	APEX1	100	94.340	ENSBTAG00000002745	APEX1	100	94.969	Bos_taurus
ENSOPRG00000014029	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSOPRG00000014029	APEX1	100	94.025	ENSCJAG00000009726	APEX1	100	94.340	Callithrix_jacchus
ENSOPRG00000014029	APEX1	100	93.082	ENSCAFG00000032033	APEX1	100	93.396	Canis_familiaris
ENSOPRG00000014029	APEX1	54	88.953	ENSCAFG00020023002	-	96	89.535	Canis_lupus_dingo
ENSOPRG00000014029	APEX1	100	93.082	ENSCAFG00020014377	-	100	93.396	Canis_lupus_dingo
ENSOPRG00000014029	APEX1	98	75.241	ENSCHIG00000014537	-	99	75.241	Capra_hircus
ENSOPRG00000014029	APEX1	100	94.340	ENSCHIG00000007298	-	100	94.969	Capra_hircus
ENSOPRG00000014029	APEX1	100	94.025	ENSTSYG00000034813	APEX1	100	94.025	Carlito_syrichta
ENSOPRG00000014029	APEX1	85	86.716	ENSCAPG00000016235	APEX1	91	95.339	Cavia_aperea
ENSOPRG00000014029	APEX1	100	92.767	ENSCPOG00000030909	APEX1	100	92.767	Cavia_porcellus
ENSOPRG00000014029	APEX1	100	80.818	ENSCCAG00000031931	-	100	81.132	Cebus_capucinus
ENSOPRG00000014029	APEX1	100	94.025	ENSCCAG00000033056	-	100	94.340	Cebus_capucinus
ENSOPRG00000014029	APEX1	100	93.082	ENSCATG00000015580	APEX1	100	93.082	Cercocebus_atys
ENSOPRG00000014029	APEX1	100	93.082	ENSCLAG00000001002	APEX1	100	93.082	Chinchilla_lanigera
ENSOPRG00000014029	APEX1	100	92.767	ENSCSAG00000016670	-	100	92.767	Chlorocebus_sabaeus
ENSOPRG00000014029	APEX1	100	92.767	ENSCSAG00000016685	-	100	92.767	Chlorocebus_sabaeus
ENSOPRG00000014029	APEX1	100	70.846	ENSCPBG00000009567	APEX1	100	71.473	Chrysemys_picta_bellii
ENSOPRG00000014029	APEX1	95	53.311	ENSCING00000008137	-	96	53.311	Ciona_intestinalis
ENSOPRG00000014029	APEX1	90	48.667	ENSCSAVG00000007144	-	100	53.668	Ciona_savignyi
ENSOPRG00000014029	APEX1	100	93.082	ENSCANG00000030726	APEX1	100	93.082	Colobus_angolensis_palliatus
ENSOPRG00000014029	APEX1	100	90.252	ENSCGRG00001017046	Apex1	100	90.252	Cricetulus_griseus_chok1gshd
ENSOPRG00000014029	APEX1	100	90.252	ENSCGRG00000008984	Apex1	100	90.252	Cricetulus_griseus_crigri
ENSOPRG00000014029	APEX1	99	64.241	ENSCSEG00000017499	apex1	99	64.241	Cynoglossus_semilaevis
ENSOPRG00000014029	APEX1	88	69.892	ENSCVAG00000022075	apex1	99	65.506	Cyprinodon_variegatus
ENSOPRG00000014029	APEX1	100	65.931	ENSDARG00000045843	apex1	100	66.246	Danio_rerio
ENSOPRG00000014029	APEX1	100	88.365	ENSDNOG00000042234	APEX1	95	88.679	Dasypus_novemcinctus
ENSOPRG00000014029	APEX1	100	94.654	ENSDORG00000001616	Apex1	100	94.654	Dipodomys_ordii
ENSOPRG00000014029	APEX1	100	92.138	ENSETEG00000004855	-	100	92.767	Echinops_telfairi
ENSOPRG00000014029	APEX1	75	63.180	ENSEBUG00000000622	-	92	63.180	Eptatretus_burgeri
ENSOPRG00000014029	APEX1	100	95.283	ENSEASG00005017489	APEX1	74	95.283	Equus_asinus_asinus
ENSOPRG00000014029	APEX1	100	95.283	ENSECAG00000022325	APEX1	82	95.283	Equus_caballus
ENSOPRG00000014029	APEX1	87	93.478	ENSEEUG00000012569	APEX1	100	93.056	Erinaceus_europaeus
ENSOPRG00000014029	APEX1	100	64.780	ENSELUG00000021706	apex1	100	64.890	Esox_lucius
ENSOPRG00000014029	APEX1	100	94.654	ENSFCAG00000030869	APEX1	100	94.654	Felis_catus
ENSOPRG00000014029	APEX1	100	92.767	ENSFDAG00000006120	APEX1	100	92.767	Fukomys_damarensis
ENSOPRG00000014029	APEX1	88	70.609	ENSFHEG00000009031	apex1	83	66.772	Fundulus_heteroclitus
ENSOPRG00000014029	APEX1	99	61.905	ENSGMOG00000007943	apex1	99	61.905	Gadus_morhua
ENSOPRG00000014029	APEX1	88	70.968	ENSGAFG00000005311	apex1	99	66.984	Gambusia_affinis
ENSOPRG00000014029	APEX1	99	65.506	ENSGACG00000019497	apex1	99	68.421	Gasterosteus_aculeatus
ENSOPRG00000014029	APEX1	100	70.533	ENSGAGG00000014999	APEX1	100	71.160	Gopherus_agassizii
ENSOPRG00000014029	APEX1	100	93.396	ENSGGOG00000002128	APEX1	100	93.711	Gorilla_gorilla
ENSOPRG00000014029	APEX1	99	65.714	ENSHBUG00000005894	apex1	99	66.032	Haplochromis_burtoni
ENSOPRG00000014029	APEX1	100	94.025	ENSHGLG00000002848	APEX1	100	94.025	Heterocephalus_glaber_female
ENSOPRG00000014029	APEX1	100	94.025	ENSHGLG00100017878	APEX1	100	94.025	Heterocephalus_glaber_male
ENSOPRG00000014029	APEX1	99	64.762	ENSHCOG00000009961	apex1	99	64.762	Hippocampus_comes
ENSOPRG00000014029	APEX1	100	67.610	ENSIPUG00000005799	apex1	100	67.610	Ictalurus_punctatus
ENSOPRG00000014029	APEX1	100	92.767	ENSSTOG00000010096	APEX1	100	93.396	Ictidomys_tridecemlineatus
ENSOPRG00000014029	APEX1	100	92.453	ENSJJAG00000012067	-	100	92.453	Jaculus_jaculus
ENSOPRG00000014029	APEX1	100	82.075	ENSJJAG00000003660	-	100	82.704	Jaculus_jaculus
ENSOPRG00000014029	APEX1	90	83.916	ENSJJAG00000020465	-	96	83.893	Jaculus_jaculus
ENSOPRG00000014029	APEX1	88	70.251	ENSKMAG00000021171	apex1	99	65.823	Kryptolebias_marmoratus
ENSOPRG00000014029	APEX1	99	64.241	ENSLBEG00000010248	apex1	99	64.241	Labrus_bergylta
ENSOPRG00000014029	APEX1	100	65.831	ENSLACG00000008617	APEX1	100	65.831	Latimeria_chalumnae
ENSOPRG00000014029	APEX1	100	66.352	ENSLOCG00000015516	apex1	99	66.352	Lepisosteus_oculatus
ENSOPRG00000014029	APEX1	100	91.824	ENSLAFG00000021872	APEX1	100	92.138	Loxodonta_africana
ENSOPRG00000014029	APEX1	100	93.082	ENSMFAG00000002565	APEX1	100	93.082	Macaca_fascicularis
ENSOPRG00000014029	APEX1	100	93.082	ENSMMUG00000048039	APEX1	100	93.082	Macaca_mulatta
ENSOPRG00000014029	APEX1	100	93.082	ENSMNEG00000036944	APEX1	100	93.082	Macaca_nemestrina
ENSOPRG00000014029	APEX1	100	93.082	ENSMLEG00000042125	APEX1	100	93.082	Mandrillus_leucophaeus
ENSOPRG00000014029	APEX1	99	66.772	ENSMAMG00000023526	apex1	99	67.089	Mastacembelus_armatus
ENSOPRG00000014029	APEX1	87	69.928	ENSMZEG00005014187	apex1	99	66.139	Maylandia_zebra
ENSOPRG00000014029	APEX1	100	89.905	ENSMAUG00000013994	Apex1	100	89.905	Mesocricetus_auratus
ENSOPRG00000014029	APEX1	100	94.654	ENSMICG00000043554	APEX1	100	94.654	Microcebus_murinus
ENSOPRG00000014029	APEX1	100	91.824	ENSMOCG00000013721	Apex1	100	91.824	Microtus_ochrogaster
ENSOPRG00000014029	APEX1	88	66.429	ENSMMOG00000010031	apex1	97	63.208	Mola_mola
ENSOPRG00000014029	APEX1	100	83.750	ENSMODG00000007125	APEX1	100	85.358	Monodelphis_domestica
ENSOPRG00000014029	APEX1	88	63.082	ENSMALG00000011699	apex1	78	61.644	Monopterus_albus
ENSOPRG00000014029	APEX1	99	93.060	MGP_CAROLIEiJ_G0019209	Apex1	99	93.060	Mus_caroli
ENSOPRG00000014029	APEX1	100	93.082	ENSMUSG00000035960	Apex1	100	93.082	Mus_musculus
ENSOPRG00000014029	APEX1	100	90.881	MGP_PahariEiJ_G0030232	Apex1	100	92.767	Mus_pahari
ENSOPRG00000014029	APEX1	100	93.082	MGP_SPRETEiJ_G0020101	Apex1	100	93.082	Mus_spretus
ENSOPRG00000014029	APEX1	100	93.125	ENSMLUG00000028957	APEX1	100	93.125	Myotis_lucifugus
ENSOPRG00000014029	APEX1	99	69.470	ENSNGAG00000021748	-	100	69.470	Nannospalax_galili
ENSOPRG00000014029	APEX1	100	92.453	ENSNGAG00000002725	-	100	92.453	Nannospalax_galili
ENSOPRG00000014029	APEX1	87	69.565	ENSNBRG00000005334	apex1	91	65.823	Neolamprologus_brichardi
ENSOPRG00000014029	APEX1	100	93.082	ENSNLEG00000010839	APEX1	100	93.396	Nomascus_leucogenys
ENSOPRG00000014029	APEX1	100	85.804	ENSMEUG00000014519	APEX1	100	85.804	Notamacropus_eugenii
ENSOPRG00000014029	APEX1	100	93.711	ENSODEG00000001703	-	100	93.711	Octodon_degus
ENSOPRG00000014029	APEX1	97	74.757	ENSODEG00000004777	-	99	74.757	Octodon_degus
ENSOPRG00000014029	APEX1	100	71.605	ENSODEG00000006583	-	100	71.605	Octodon_degus
ENSOPRG00000014029	APEX1	88	70.144	ENSONIG00000012089	apex1	99	66.456	Oreochromis_niloticus
ENSOPRG00000014029	APEX1	90	82.807	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSOPRG00000014029	APEX1	100	96.226	ENSOCUG00000005022	APEX1	100	96.226	Oryctolagus_cuniculus
ENSOPRG00000014029	APEX1	99	66.562	ENSORLG00000012378	apex1	99	66.562	Oryzias_latipes
ENSOPRG00000014029	APEX1	99	66.562	ENSORLG00020021371	apex1	99	66.562	Oryzias_latipes_hni
ENSOPRG00000014029	APEX1	99	66.562	ENSORLG00015020089	apex1	99	66.562	Oryzias_latipes_hsok
ENSOPRG00000014029	APEX1	99	65.615	ENSOMEG00000018876	apex1	99	65.615	Oryzias_melastigma
ENSOPRG00000014029	APEX1	98	82.051	ENSOGAG00000029355	-	100	83.013	Otolemur_garnettii
ENSOPRG00000014029	APEX1	100	93.396	ENSOGAG00000013335	-	100	93.396	Otolemur_garnettii
ENSOPRG00000014029	APEX1	97	89.935	ENSOARG00000001876	-	100	90.584	Ovis_aries
ENSOPRG00000014029	APEX1	100	93.396	ENSOARG00000019740	-	100	94.025	Ovis_aries
ENSOPRG00000014029	APEX1	99	79.683	ENSOARG00000014424	-	100	79.683	Ovis_aries
ENSOPRG00000014029	APEX1	100	93.396	ENSPPAG00000038760	APEX1	100	93.711	Pan_paniscus
ENSOPRG00000014029	APEX1	100	94.340	ENSPPRG00000011794	APEX1	100	94.654	Panthera_pardus
ENSOPRG00000014029	APEX1	100	94.654	ENSPTIG00000014829	APEX1	100	94.654	Panthera_tigris_altaica
ENSOPRG00000014029	APEX1	100	93.396	ENSPTRG00000006093	APEX1	100	93.711	Pan_troglodytes
ENSOPRG00000014029	APEX1	100	93.082	ENSPANG00000022757	APEX1	100	93.082	Papio_anubis
ENSOPRG00000014029	APEX1	87	68.231	ENSPKIG00000003504	apex1	100	64.375	Paramormyrops_kingsleyae
ENSOPRG00000014029	APEX1	76	65.844	ENSPMGG00000016596	apex1	73	65.844	Periophthalmus_magnuspinnatus
ENSOPRG00000014029	APEX1	100	92.453	ENSPEMG00000019097	Apex1	100	92.453	Peromyscus_maniculatus_bairdii
ENSOPRG00000014029	APEX1	94	64.548	ENSPMAG00000007275	-	99	64.548	Petromyzon_marinus
ENSOPRG00000014029	APEX1	100	83.699	ENSPCIG00000023274	APEX1	100	85.312	Phascolarctos_cinereus
ENSOPRG00000014029	APEX1	88	71.326	ENSPFOG00000004178	apex1	99	67.089	Poecilia_formosa
ENSOPRG00000014029	APEX1	88	70.968	ENSPLAG00000012779	apex1	99	67.089	Poecilia_latipinna
ENSOPRG00000014029	APEX1	88	71.326	ENSPMEG00000019623	apex1	99	67.089	Poecilia_mexicana
ENSOPRG00000014029	APEX1	88	71.326	ENSPREG00000014298	apex1	99	67.089	Poecilia_reticulata
ENSOPRG00000014029	APEX1	100	92.767	ENSPPYG00000005565	APEX1	100	93.396	Pongo_abelii
ENSOPRG00000014029	APEX1	100	90.881	ENSPCAG00000010376	APEX1	100	90.881	Procavia_capensis
ENSOPRG00000014029	APEX1	100	94.654	ENSPCOG00000021564	APEX1	100	94.654	Propithecus_coquereli
ENSOPRG00000014029	APEX1	100	93.438	ENSPVAG00000010736	APEX1	100	93.438	Pteropus_vampyrus
ENSOPRG00000014029	APEX1	87	69.928	ENSPNYG00000023940	apex1	99	66.139	Pundamilia_nyererei
ENSOPRG00000014029	APEX1	93	65.085	ENSPNAG00000020897	apex1	96	64.966	Pygocentrus_nattereri
ENSOPRG00000014029	APEX1	100	92.138	ENSRNOG00000009663	Apex1	100	92.138	Rattus_norvegicus
ENSOPRG00000014029	APEX1	100	93.396	ENSRBIG00000038325	APEX1	99	93.396	Rhinopithecus_bieti
ENSOPRG00000014029	APEX1	100	93.711	ENSSBOG00000018921	-	100	94.025	Saimiri_boliviensis_boliviensis
ENSOPRG00000014029	APEX1	100	78.931	ENSSBOG00000031372	-	100	79.048	Saimiri_boliviensis_boliviensis
ENSOPRG00000014029	APEX1	100	83.385	ENSSHAG00000013524	APEX1	100	83.385	Sarcophilus_harrisii
ENSOPRG00000014029	APEX1	100	61.830	ENSSFOG00015001948	apex1	100	61.514	Scleropages_formosus
ENSOPRG00000014029	APEX1	88	68.345	ENSSMAG00000013348	apex1	99	64.127	Scophthalmus_maximus
ENSOPRG00000014029	APEX1	99	65.506	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSOPRG00000014029	APEX1	99	65.823	ENSSLDG00000023005	apex1	99	65.823	Seriola_lalandi_dorsalis
ENSOPRG00000014029	APEX1	92	70.307	ENSSPUG00000000531	APEX1	99	70.307	Sphenodon_punctatus
ENSOPRG00000014029	APEX1	88	68.100	ENSSPAG00000000458	apex1	99	64.127	Stegastes_partitus
ENSOPRG00000014029	APEX1	100	92.767	ENSSSCG00000040060	-	100	93.396	Sus_scrofa
ENSOPRG00000014029	APEX1	98	54.890	ENSSSCG00000039705	-	98	58.054	Sus_scrofa
ENSOPRG00000014029	APEX1	74	58.051	ENSTGUG00000014378	APEX1	100	58.051	Taeniopygia_guttata
ENSOPRG00000014029	APEX1	88	66.187	ENSTRUG00000004268	apex1	95	62.069	Takifugu_rubripes
ENSOPRG00000014029	APEX1	99	63.810	ENSTNIG00000005778	apex1	99	63.810	Tetraodon_nigroviridis
ENSOPRG00000014029	APEX1	100	90.252	ENSTBEG00000006405	APEX1	100	90.881	Tupaia_belangeri
ENSOPRG00000014029	APEX1	74	94.915	ENSTTRG00000007860	APEX1	100	94.915	Tursiops_truncatus
ENSOPRG00000014029	APEX1	100	94.969	ENSUAMG00000010457	APEX1	100	94.969	Ursus_americanus
ENSOPRG00000014029	APEX1	100	94.969	ENSUMAG00000009178	APEX1	100	94.969	Ursus_maritimus
ENSOPRG00000014029	APEX1	74	89.831	ENSVPAG00000005083	APEX1	100	89.831	Vicugna_pacos
ENSOPRG00000014029	APEX1	100	92.767	ENSVVUG00000009010	APEX1	100	93.082	Vulpes_vulpes
ENSOPRG00000014029	APEX1	100	63.665	ENSXETG00000024773	apex1	100	66.044	Xenopus_tropicalis
ENSOPRG00000014029	APEX1	88	70.968	ENSXCOG00000015233	apex1	99	66.772	Xiphophorus_couchianus
ENSOPRG00000014029	APEX1	88	70.968	ENSXMAG00000006195	apex1	99	66.772	Xiphophorus_maculatus