EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000015116 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 21084 bases
Position: chrGeneScaffold_393:130159-151242
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000013824	RNA_pol_Rpb1_5	PF04998.17	4.3e-99	1	1
ENSOPRP00000013824	RNA_pol_Rpb1_4	PF05000.17	1.6e-38	1	1
ENSOPRP00000013824	RNA_pol_Rpb1_2	PF00623.20	4.4e-75	1	1
ENSOPRP00000013824	RNA_pol_Rpb1_3	PF04983.18	2.1e-50	1	1
ENSOPRP00000013824	RNA_pol_Rpb1_1	PF04997.12	1.9e-109	1	1
ENSOPRP00000013824	RNA_pol_Rpb1_7	PF04990.12	1e-54	1	1
ENSOPRP00000013824	RNA_pol_Rpb1_6	PF04992.14	5.1e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000015135	-	4743	-	ENSOPRP00000013824	1581 (aa)	-	UPI00017A22FA

Gene Model

Click here to download ENSOPRG00000015116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000015116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000015116	-	80	38.293	ENSOPRG00000001880	-	88	38.293
ENSOPRG00000015116	-	66	33.708	ENSOPRG00000008269	POLR1A	64	33.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000015116	-	99	94.188	ENSAPOG00000006552	polr2a	80	94.188	Acanthochromis_polyacanthus
ENSOPRG00000015116	-	99	99.496	ENSAMEG00000016265	-	80	99.496	Ailuropoda_melanoleuca
ENSOPRG00000015116	-	99	91.535	ENSACIG00000015982	polr2a	80	92.167	Amphilophus_citrinellus
ENSOPRG00000015116	-	99	94.251	ENSAOCG00000004255	polr2a	83	92.104	Amphiprion_ocellaris
ENSOPRG00000015116	-	99	94.251	ENSAPEG00000012623	polr2a	80	94.251	Amphiprion_percula
ENSOPRG00000015116	-	99	94.125	ENSATEG00000019644	polr2a	80	94.125	Anabas_testudineus
ENSOPRG00000015116	-	99	97.915	ENSACAG00000014561	POLR2A	80	97.915	Anolis_carolinensis
ENSOPRG00000015116	-	99	99.747	ENSANAG00000020093	-	80	99.747	Aotus_nancymaae
ENSOPRG00000015116	-	99	93.936	ENSACLG00000006735	polr2a	80	93.936	Astatotilapia_calliptera
ENSOPRG00000015116	-	99	94.504	ENSAMXG00000020046	polr2a	80	94.504	Astyanax_mexicanus
ENSOPRG00000015116	-	99	99.747	ENSBTAG00000046765	POLR2A	80	99.747	Bos_taurus
ENSOPRG00000015116	-	99	70.279	WBGene00000123	ama-1	83	70.716	Caenorhabditis_elegans
ENSOPRG00000015116	-	99	99.810	ENSCAFG00000016532	POLR2A	88	99.810	Canis_familiaris
ENSOPRG00000015116	-	99	98.674	ENSCAFG00020007929	-	80	98.674	Canis_lupus_dingo
ENSOPRG00000015116	-	99	99.747	ENSCHIG00000027173	-	80	99.747	Capra_hircus
ENSOPRG00000015116	-	100	97.667	ENSTSYG00000012803	-	83	97.667	Carlito_syrichta
ENSOPRG00000015116	-	98	99.485	ENSCAPG00000001882	-	86	99.485	Cavia_aperea
ENSOPRG00000015116	-	99	99.557	ENSCPOG00000014812	-	86	99.557	Cavia_porcellus
ENSOPRG00000015116	-	99	99.747	ENSCCAG00000020938	-	80	99.747	Cebus_capucinus
ENSOPRG00000015116	-	99	99.684	ENSCATG00000013680	-	80	99.684	Cercocebus_atys
ENSOPRG00000015116	-	99	99.558	ENSCLAG00000012196	-	80	99.558	Chinchilla_lanigera
ENSOPRG00000015116	-	100	88.834	ENSCSAG00000011644	-	80	90.458	Chlorocebus_sabaeus
ENSOPRG00000015116	-	99	94.441	ENSCPBG00000012697	POLR2A	94	94.290	Chrysemys_picta_bellii
ENSOPRG00000015116	-	99	77.313	ENSCING00000007884	-	86	77.628	Ciona_intestinalis
ENSOPRG00000015116	-	98	76.864	ENSCSAVG00000008334	-	91	74.936	Ciona_savignyi
ENSOPRG00000015116	-	99	98.863	ENSCANG00000010622	-	81	97.936	Colobus_angolensis_palliatus
ENSOPRG00000015116	-	99	94.162	ENSCGRG00001003538	Polr2a	81	94.147	Cricetulus_griseus_chok1gshd
ENSOPRG00000015116	-	100	96.271	ENSCGRG00000012105	Polr2a	85	96.271	Cricetulus_griseus_crigri
ENSOPRG00000015116	-	99	93.493	ENSCSEG00000002635	polr2a	80	93.493	Cynoglossus_semilaevis
ENSOPRG00000015116	-	99	94.378	ENSCVAG00000005156	polr2a	80	94.378	Cyprinodon_variegatus
ENSOPRG00000015116	-	99	94.378	ENSDARG00000099966	polr2a	80	94.378	Danio_rerio
ENSOPRG00000015116	-	99	96.083	ENSDNOG00000016482	-	80	96.083	Dasypus_novemcinctus
ENSOPRG00000015116	-	99	99.747	ENSDORG00000008667	Polr2a	80	99.747	Dipodomys_ordii
ENSOPRG00000015116	-	98	75.580	FBgn0003277	RpII215	82	75.563	Drosophila_melanogaster
ENSOPRG00000015116	-	93	93.431	ENSETEG00000002540	-	77	95.694	Echinops_telfairi
ENSOPRG00000015116	-	99	87.840	ENSEBUG00000013967	polr2a	79	88.020	Eptatretus_burgeri
ENSOPRG00000015116	-	99	97.599	ENSEASG00005019114	-	81	97.599	Equus_asinus_asinus
ENSOPRG00000015116	-	99	99.684	ENSECAG00000018485	POLR2A	80	99.684	Equus_caballus
ENSOPRG00000015116	-	94	99.533	ENSEEUG00000001154	-	92	99.533	Erinaceus_europaeus
ENSOPRG00000015116	-	99	89.900	ENSELUG00000014284	polr2a	82	90.521	Esox_lucius
ENSOPRG00000015116	-	99	99.684	ENSFDAG00000008287	-	80	99.684	Fukomys_damarensis
ENSOPRG00000015116	-	99	94.378	ENSFHEG00000001768	polr2a	83	94.378	Fundulus_heteroclitus
ENSOPRG00000015116	-	99	92.916	ENSGMOG00000007725	polr2a	96	92.916	Gadus_morhua
ENSOPRG00000015116	-	99	94.315	ENSGAFG00000005389	polr2a	87	94.315	Gambusia_affinis
ENSOPRG00000015116	-	99	92.785	ENSGACG00000019366	polr2a	94	93.017	Gasterosteus_aculeatus
ENSOPRG00000015116	-	99	97.480	ENSGGOG00000014800	-	96	98.071	Gorilla_gorilla
ENSOPRG00000015116	-	99	93.936	ENSHBUG00000018937	polr2a	83	93.936	Haplochromis_burtoni
ENSOPRG00000015116	-	99	99.684	ENSHGLG00000012381	POLR2A	80	99.684	Heterocephalus_glaber_female
ENSOPRG00000015116	-	99	99.684	ENSHGLG00100014843	POLR2A	80	99.684	Heterocephalus_glaber_male
ENSOPRG00000015116	-	99	93.746	ENSHCOG00000011874	polr2a	80	93.746	Hippocampus_comes
ENSOPRG00000015116	-	99	93.872	ENSIPUG00000002613	Polr2a	80	93.872	Ictalurus_punctatus
ENSOPRG00000015116	-	99	99.747	ENSSTOG00000001304	-	80	99.747	Ictidomys_tridecemlineatus
ENSOPRG00000015116	-	99	99.621	ENSJJAG00000013049	Polr2a	80	99.621	Jaculus_jaculus
ENSOPRG00000015116	-	99	73.048	ENSKMAG00000016343	polr2a	85	85.183	Kryptolebias_marmoratus
ENSOPRG00000015116	-	99	93.872	ENSLBEG00000027652	polr2a	80	93.872	Labrus_bergylta
ENSOPRG00000015116	-	98	86.735	ENSLACG00000012071	POLR2A	79	86.791	Latimeria_chalumnae
ENSOPRG00000015116	-	99	94.694	ENSLOCG00000013863	polr2a	84	94.694	Lepisosteus_oculatus
ENSOPRG00000015116	-	99	99.684	ENSLAFG00000008626	-	84	99.684	Loxodonta_africana
ENSOPRG00000015116	-	62	98.264	ENSMFAG00000007042	-	99	98.264	Macaca_fascicularis
ENSOPRG00000015116	-	99	99.684	ENSMMUG00000023620	-	81	99.684	Macaca_mulatta
ENSOPRG00000015116	-	99	99.242	ENSMNEG00000040407	-	80	99.242	Macaca_nemestrina
ENSOPRG00000015116	-	99	93.865	ENSMLEG00000030263	-	99	98.264	Mandrillus_leucophaeus
ENSOPRG00000015116	-	99	93.999	ENSMAMG00000003351	polr2a	80	93.999	Mastacembelus_armatus
ENSOPRG00000015116	-	99	93.936	ENSMZEG00005021429	polr2a	80	93.936	Maylandia_zebra
ENSOPRG00000015116	-	62	99.898	ENSMAUG00000021055	-	99	99.898	Mesocricetus_auratus
ENSOPRG00000015116	-	99	99.621	ENSMICG00000013372	-	98	98.669	Microcebus_murinus
ENSOPRG00000015116	-	99	95.340	ENSMOCG00000018279	Polr2a	78	95.340	Microtus_ochrogaster
ENSOPRG00000015116	-	99	93.493	ENSMMOG00000012515	polr2a	80	93.493	Mola_mola
ENSOPRG00000015116	-	99	99.242	ENSMODG00000007009	-	80	99.242	Monodelphis_domestica
ENSOPRG00000015116	-	99	94.188	ENSMALG00000008716	polr2a	84	92.040	Monopterus_albus
ENSOPRG00000015116	-	99	99.747	MGP_CAROLIEiJ_G0016587	Polr2a	80	99.747	Mus_caroli
ENSOPRG00000015116	-	99	99.747	ENSMUSG00000005198	Polr2a	80	99.747	Mus_musculus
ENSOPRG00000015116	-	99	97.484	MGP_PahariEiJ_G0017718	Polr2a	80	97.484	Mus_pahari
ENSOPRG00000015116	-	99	99.747	MGP_SPRETEiJ_G0017423	Polr2a	80	99.747	Mus_spretus
ENSOPRG00000015116	-	99	99.747	ENSMPUG00000009648	-	80	99.747	Mustela_putorius_furo
ENSOPRG00000015116	-	99	99.117	ENSMLUG00000009088	-	80	99.117	Myotis_lucifugus
ENSOPRG00000015116	-	99	99.747	ENSNGAG00000002543	Polr2a	80	99.747	Nannospalax_galili
ENSOPRG00000015116	-	99	91.282	ENSNBRG00000002005	polr2a	80	91.851	Neolamprologus_brichardi
ENSOPRG00000015116	-	99	98.236	ENSNLEG00000009460	-	80	98.236	Nomascus_leucogenys
ENSOPRG00000015116	-	97	91.075	ENSMEUG00000008611	-	91	91.075	Notamacropus_eugenii
ENSOPRG00000015116	-	96	98.486	ENSODEG00000017674	-	83	96.244	Octodon_degus
ENSOPRG00000015116	-	99	94.125	ENSONIG00000009231	polr2a	80	94.125	Oreochromis_niloticus
ENSOPRG00000015116	-	59	97.961	ENSOANG00000003303	-	98	97.961	Ornithorhynchus_anatinus
ENSOPRG00000015116	-	99	99.684	ENSOCUG00000017929	-	91	99.621	Oryctolagus_cuniculus
ENSOPRG00000015116	-	99	93.999	ENSORLG00000006431	polr2a	80	93.999	Oryzias_latipes
ENSOPRG00000015116	-	99	93.999	ENSORLG00020010235	polr2a	80	93.999	Oryzias_latipes_hni
ENSOPRG00000015116	-	99	93.999	ENSORLG00015007075	polr2a	80	93.999	Oryzias_latipes_hsok
ENSOPRG00000015116	-	99	94.125	ENSOMEG00000010713	polr2a	99	94.125	Oryzias_melastigma
ENSOPRG00000015116	-	99	99.558	ENSOGAG00000033608	-	80	99.558	Otolemur_garnettii
ENSOPRG00000015116	-	99	99.747	ENSOARG00000013874	-	84	99.747	Ovis_aries
ENSOPRG00000015116	-	99	98.739	ENSPPAG00000043734	-	80	97.284	Pan_paniscus
ENSOPRG00000015116	-	99	98.236	ENSPTRG00000008691	POLR2A	80	98.236	Pan_troglodytes
ENSOPRG00000015116	-	99	98.863	ENSPANG00000024099	-	80	98.863	Papio_anubis
ENSOPRG00000015116	-	95	95.082	ENSPKIG00000005727	polr2a	81	95.082	Paramormyrops_kingsleyae
ENSOPRG00000015116	-	99	96.151	ENSPSIG00000014006	POLR2A	96	96.151	Pelodiscus_sinensis
ENSOPRG00000015116	-	99	94.378	ENSPMGG00000019734	polr2a	96	94.378	Periophthalmus_magnuspinnatus
ENSOPRG00000015116	-	99	99.747	ENSPEMG00000012521	Polr2a	80	99.747	Peromyscus_maniculatus_bairdii
ENSOPRG00000015116	-	99	99.242	ENSPCIG00000028851	-	81	99.242	Phascolarctos_cinereus
ENSOPRG00000015116	-	99	94.315	ENSPFOG00000007890	polr2a	83	94.315	Poecilia_formosa
ENSOPRG00000015116	-	99	94.315	ENSPLAG00000007399	polr2a	83	94.315	Poecilia_latipinna
ENSOPRG00000015116	-	99	94.315	ENSPMEG00000002071	polr2a	83	94.315	Poecilia_mexicana
ENSOPRG00000015116	-	99	94.251	ENSPREG00000013122	polr2a	80	94.251	Poecilia_reticulata
ENSOPRG00000015116	-	99	99.747	ENSPPYG00000007924	-	81	99.747	Pongo_abelii
ENSOPRG00000015116	-	90	99.737	ENSPCAG00000006951	-	72	99.737	Procavia_capensis
ENSOPRG00000015116	-	99	98.248	ENSPCOG00000025260	-	80	98.248	Propithecus_coquereli
ENSOPRG00000015116	-	99	99.684	ENSPVAG00000005069	-	80	99.684	Pteropus_vampyrus
ENSOPRG00000015116	-	99	93.999	ENSPNYG00000022340	polr2a	80	93.999	Pundamilia_nyererei
ENSOPRG00000015116	-	99	94.315	ENSPNAG00000011237	polr2a	80	94.315	Pygocentrus_nattereri
ENSOPRG00000015116	-	99	99.810	ENSRNOG00000028834	Polr2a	80	99.810	Rattus_norvegicus
ENSOPRG00000015116	-	99	99.305	ENSRBIG00000002471	-	82	99.305	Rhinopithecus_bieti
ENSOPRG00000015116	-	99	99.684	ENSRROG00000029583	-	81	99.684	Rhinopithecus_roxellana
ENSOPRG00000015116	-	98	50.721	YDL140C	RPO21	91	49.815	Saccharomyces_cerevisiae
ENSOPRG00000015116	-	99	99.747	ENSSBOG00000000808	-	80	99.747	Saimiri_boliviensis_boliviensis
ENSOPRG00000015116	-	99	99.242	ENSSHAG00000002858	-	82	99.242	Sarcophilus_harrisii
ENSOPRG00000015116	-	99	94.378	ENSSFOG00015023275	polr2a	80	94.378	Scleropages_formosus
ENSOPRG00000015116	-	99	93.746	ENSSMAG00000009137	polr2a	81	93.746	Scophthalmus_maximus
ENSOPRG00000015116	-	99	94.125	ENSSDUG00000020466	polr2a	80	94.125	Seriola_dumerili
ENSOPRG00000015116	-	99	94.125	ENSSLDG00000020613	polr2a	80	94.125	Seriola_lalandi_dorsalis
ENSOPRG00000015116	-	99	95.644	ENSSARG00000005875	-	94	95.644	Sorex_araneus
ENSOPRG00000015116	-	99	94.188	ENSSPAG00000016741	polr2a	81	94.188	Stegastes_partitus
ENSOPRG00000015116	-	99	98.800	ENSSSCG00000028278	-	80	98.800	Sus_scrofa
ENSOPRG00000015116	-	99	88.615	ENSTRUG00000012320	polr2a	79	88.615	Takifugu_rubripes
ENSOPRG00000015116	-	99	92.609	ENSTNIG00000010136	polr2a	91	92.609	Tetraodon_nigroviridis
ENSOPRG00000015116	-	67	100.000	ENSTBEG00000013294	-	53	100.000	Tupaia_belangeri
ENSOPRG00000015116	-	99	98.039	ENSTTRG00000014273	-	80	98.039	Tursiops_truncatus
ENSOPRG00000015116	-	99	99.433	ENSUAMG00000014866	-	86	99.433	Ursus_americanus
ENSOPRG00000015116	-	91	100.000	ENSUMAG00000015732	-	80	100.000	Ursus_maritimus
ENSOPRG00000015116	-	51	100.000	ENSVPAG00000008842	-	56	100.000	Vicugna_pacos
ENSOPRG00000015116	-	99	99.810	ENSVVUG00000027878	-	82	99.810	Vulpes_vulpes
ENSOPRG00000015116	-	99	96.669	ENSXETG00000012465	polr2a	80	96.669	Xenopus_tropicalis
ENSOPRG00000015116	-	99	91.346	ENSXCOG00000001804	polr2a	86	92.040	Xiphophorus_couchianus
ENSOPRG00000015116	-	99	94.251	ENSXMAG00000015687	polr2a	80	94.251	Xiphophorus_maculatus