EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000015464 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 33365 bases
Position: chrGeneScaffold_2225:75228-108592
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000014157	ResIII	PF04851.15	8.2e-26	1	2
ENSOPRP00000014157	ResIII	PF04851.15	8.2e-26	2	2
ENSOPRP00000014157	DEAD	PF00270.29	2.9e-52	1	2
ENSOPRP00000014157	DEAD	PF00270.29	2.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000015499	SNRNP200-201	6405	-	ENSOPRP00000014157	2134 (aa)	-	UPI000177889F

Gene Model

Click here to download ENSOPRG00000015464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000015464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000015464	SNRNP200	74	32.630	ENSOPRG00000013916	HFM1	58	32.630

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000015464	SNRNP200	100	95.974	ENSG00000144028	SNRNP200	99	99.830	Homo_sapiens
ENSOPRG00000015464	SNRNP200	99	87.553	ENSAPOG00000010223	snrnp200	96	89.640	Acanthochromis_polyacanthus
ENSOPRG00000015464	SNRNP200	100	95.927	ENSAMEG00000008996	SNRNP200	100	95.927	Ailuropoda_melanoleuca
ENSOPRG00000015464	SNRNP200	96	89.136	ENSACIG00000001764	snrnp200	96	89.173	Amphilophus_citrinellus
ENSOPRG00000015464	SNRNP200	99	87.459	ENSAOCG00000024593	snrnp200	98	89.010	Amphiprion_ocellaris
ENSOPRG00000015464	SNRNP200	96	89.028	ENSAPEG00000012554	snrnp200	98	89.064	Amphiprion_percula
ENSOPRG00000015464	SNRNP200	99	87.365	ENSATEG00000022522	snrnp200	96	89.446	Anabas_testudineus
ENSOPRG00000015464	SNRNP200	97	96.225	ENSAPLG00000004313	SNRNP200	97	96.225	Anas_platyrhynchos
ENSOPRG00000015464	SNRNP200	99	92.608	ENSACAG00000000434	SNRNP200	95	95.604	Anolis_carolinensis
ENSOPRG00000015464	SNRNP200	100	91.418	ENSANAG00000036625	SNRNP200	100	91.838	Aotus_nancymaae
ENSOPRG00000015464	SNRNP200	96	89.371	ENSACLG00000011188	snrnp200	96	89.251	Astatotilapia_calliptera
ENSOPRG00000015464	SNRNP200	99	87.177	ENSAMXG00000005684	snrnp200	96	89.251	Astyanax_mexicanus
ENSOPRG00000015464	SNRNP200	100	95.365	ENSBTAG00000000848	SNRNP200	100	95.365	Bos_taurus
ENSOPRG00000015464	SNRNP200	100	95.927	ENSCJAG00000007514	SNRNP200	100	95.927	Callithrix_jacchus
ENSOPRG00000015464	SNRNP200	100	95.147	ENSCAFG00020019979	SNRNP200	100	98.191	Canis_lupus_dingo
ENSOPRG00000015464	SNRNP200	100	95.552	ENSCHIG00000020611	SNRNP200	100	95.552	Capra_hircus
ENSOPRG00000015464	SNRNP200	100	95.974	ENSTSYG00000010467	SNRNP200	100	95.974	Carlito_syrichta
ENSOPRG00000015464	SNRNP200	97	98.069	ENSCAPG00000017234	SNRNP200	97	98.069	Cavia_aperea
ENSOPRG00000015464	SNRNP200	100	95.787	ENSCPOG00000006776	SNRNP200	100	95.787	Cavia_porcellus
ENSOPRG00000015464	SNRNP200	100	95.927	ENSCCAG00000033962	SNRNP200	100	95.927	Cebus_capucinus
ENSOPRG00000015464	SNRNP200	100	95.974	ENSCATG00000015790	SNRNP200	100	95.974	Cercocebus_atys
ENSOPRG00000015464	SNRNP200	100	95.646	ENSCLAG00000004116	SNRNP200	100	95.646	Chinchilla_lanigera
ENSOPRG00000015464	SNRNP200	100	95.927	ENSCSAG00000017369	SNRNP200	100	95.927	Chlorocebus_sabaeus
ENSOPRG00000015464	SNRNP200	75	97.861	ENSCHOG00000012981	-	55	100.000	Choloepus_hoffmanni
ENSOPRG00000015464	SNRNP200	100	93.829	ENSCPBG00000022571	SNRNP200	99	97.872	Chrysemys_picta_bellii
ENSOPRG00000015464	SNRNP200	99	73.751	ENSCING00000005082	-	96	75.899	Ciona_intestinalis
ENSOPRG00000015464	SNRNP200	94	98.407	ENSCANG00000033932	SNRNP200	100	98.407	Colobus_angolensis_palliatus
ENSOPRG00000015464	SNRNP200	100	95.833	ENSCGRG00001022610	Snrnp200	100	95.833	Cricetulus_griseus_chok1gshd
ENSOPRG00000015464	SNRNP200	100	95.278	ENSCGRG00000016472	Snrnp200	100	95.278	Cricetulus_griseus_crigri
ENSOPRG00000015464	SNRNP200	100	86.564	ENSCSEG00000016399	snrnp200	96	88.716	Cynoglossus_semilaevis
ENSOPRG00000015464	SNRNP200	100	82.303	ENSCVAG00000017631	snrnp200	96	84.339	Cyprinodon_variegatus
ENSOPRG00000015464	SNRNP200	100	87.032	ENSDARG00000077536	snrnp200	96	89.202	Danio_rerio
ENSOPRG00000015464	SNRNP200	100	94.382	ENSDNOG00000011227	SNRNP200	100	94.382	Dasypus_novemcinctus
ENSOPRG00000015464	SNRNP200	100	93.221	ENSDORG00000005861	Snrnp200	100	93.221	Dipodomys_ordii
ENSOPRG00000015464	SNRNP200	100	71.508	FBgn0263599	l(3)72Ab	96	73.379	Drosophila_melanogaster
ENSOPRG00000015464	SNRNP200	95	94.353	ENSETEG00000000162	SNRNP200	74	94.353	Echinops_telfairi
ENSOPRG00000015464	SNRNP200	83	79.731	ENSEBUG00000016524	snrnp200	95	79.731	Eptatretus_burgeri
ENSOPRG00000015464	SNRNP200	97	97.494	ENSEASG00005001884	SNRNP200	97	97.494	Equus_asinus_asinus
ENSOPRG00000015464	SNRNP200	100	95.927	ENSECAG00000019675	SNRNP200	99	97.049	Equus_caballus
ENSOPRG00000015464	SNRNP200	87	96.699	ENSEEUG00000012178	SNRNP200	91	96.699	Erinaceus_europaeus
ENSOPRG00000015464	SNRNP200	99	87.459	ENSELUG00000018948	snrnp200	96	89.543	Esox_lucius
ENSOPRG00000015464	SNRNP200	100	95.974	ENSFCAG00000010699	SNRNP200	100	95.974	Felis_catus
ENSOPRG00000015464	SNRNP200	91	88.460	ENSFALG00000001368	-	92	88.460	Ficedula_albicollis
ENSOPRG00000015464	SNRNP200	100	95.693	ENSFDAG00000004683	SNRNP200	100	95.693	Fukomys_damarensis
ENSOPRG00000015464	SNRNP200	100	84.504	ENSFHEG00000003786	snrnp200	96	86.625	Fundulus_heteroclitus
ENSOPRG00000015464	SNRNP200	97	88.620	ENSGMOG00000004881	snrnp200	96	88.587	Gadus_morhua
ENSOPRG00000015464	SNRNP200	100	84.691	ENSGAFG00000010807	snrnp200	96	86.819	Gambusia_affinis
ENSOPRG00000015464	SNRNP200	96	89.099	ENSGACG00000011474	snrnp200	96	89.072	Gasterosteus_aculeatus
ENSOPRG00000015464	SNRNP200	91	97.791	ENSGAGG00000016069	SNRNP200	98	95.312	Gopherus_agassizii
ENSOPRG00000015464	SNRNP200	100	95.974	ENSGGOG00000005174	SNRNP200	100	95.974	Gorilla_gorilla
ENSOPRG00000015464	SNRNP200	96	86.898	ENSHBUG00000011322	snrnp200	98	86.883	Haplochromis_burtoni
ENSOPRG00000015464	SNRNP200	100	95.787	ENSHGLG00000006654	SNRNP200	100	95.787	Heterocephalus_glaber_female
ENSOPRG00000015464	SNRNP200	100	95.787	ENSHGLG00100018594	SNRNP200	100	95.787	Heterocephalus_glaber_male
ENSOPRG00000015464	SNRNP200	100	95.927	ENSSTOG00000016351	SNRNP200	100	95.927	Ictidomys_tridecemlineatus
ENSOPRG00000015464	SNRNP200	100	95.740	ENSJJAG00000023659	Snrnp200	100	95.740	Jaculus_jaculus
ENSOPRG00000015464	SNRNP200	100	84.228	ENSKMAG00000003665	snrnp200	96	86.282	Kryptolebias_marmoratus
ENSOPRG00000015464	SNRNP200	100	86.938	ENSLBEG00000021585	snrnp200	96	89.105	Labrus_bergylta
ENSOPRG00000015464	SNRNP200	82	93.230	ENSLACG00000000226	SNRNP200	99	93.230	Latimeria_chalumnae
ENSOPRG00000015464	SNRNP200	100	88.858	ENSLOCG00000015198	snrnp200	96	91.099	Lepisosteus_oculatus
ENSOPRG00000015464	SNRNP200	100	95.552	ENSLAFG00000015626	SNRNP200	100	95.552	Loxodonta_africana
ENSOPRG00000015464	SNRNP200	100	95.927	ENSMFAG00000040174	SNRNP200	99	99.123	Macaca_fascicularis
ENSOPRG00000015464	SNRNP200	100	95.927	ENSMMUG00000023261	SNRNP200	100	95.927	Macaca_mulatta
ENSOPRG00000015464	SNRNP200	100	95.880	ENSMNEG00000032398	SNRNP200	100	95.880	Macaca_nemestrina
ENSOPRG00000015464	SNRNP200	100	95.974	ENSMLEG00000019083	SNRNP200	99	99.123	Mandrillus_leucophaeus
ENSOPRG00000015464	SNRNP200	96	89.072	ENSMAMG00000007851	snrnp200	96	89.013	Mastacembelus_armatus
ENSOPRG00000015464	SNRNP200	96	86.898	ENSMZEG00005010787	snrnp200	98	86.883	Maylandia_zebra
ENSOPRG00000015464	SNRNP200	97	95.886	ENSMGAG00000001831	SNRNP200	99	95.866	Meleagris_gallopavo
ENSOPRG00000015464	SNRNP200	100	95.880	ENSMAUG00000011825	Snrnp200	100	95.880	Mesocricetus_auratus
ENSOPRG00000015464	SNRNP200	100	95.927	ENSMICG00000004710	SNRNP200	98	98.873	Microcebus_murinus
ENSOPRG00000015464	SNRNP200	100	93.305	ENSMOCG00000011814	Snrnp200	100	93.305	Microtus_ochrogaster
ENSOPRG00000015464	SNRNP200	99	85.674	ENSMMOG00000014167	snrnp200	96	87.695	Mola_mola
ENSOPRG00000015464	SNRNP200	100	95.037	ENSMODG00000008475	SNRNP200	100	95.037	Monodelphis_domestica
ENSOPRG00000015464	SNRNP200	96	89.702	ENSMALG00000001973	snrnp200	96	89.591	Monopterus_albus
ENSOPRG00000015464	SNRNP200	100	95.693	MGP_CAROLIEiJ_G0024250	Snrnp200	100	95.693	Mus_caroli
ENSOPRG00000015464	SNRNP200	100	95.740	ENSMUSG00000003660	Snrnp200	100	95.740	Mus_musculus
ENSOPRG00000015464	SNRNP200	100	95.787	MGP_PahariEiJ_G0025695	Snrnp200	100	95.787	Mus_pahari
ENSOPRG00000015464	SNRNP200	100	95.740	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSOPRG00000015464	SNRNP200	100	95.880	ENSMPUG00000008949	SNRNP200	100	95.880	Mustela_putorius_furo
ENSOPRG00000015464	SNRNP200	100	95.231	ENSMLUG00000010493	SNRNP200	100	95.231	Myotis_lucifugus
ENSOPRG00000015464	SNRNP200	100	91.854	ENSMLUG00000027511	-	100	91.854	Myotis_lucifugus
ENSOPRG00000015464	SNRNP200	100	95.974	ENSNGAG00000021993	Snrnp200	100	95.974	Nannospalax_galili
ENSOPRG00000015464	SNRNP200	90	89.159	ENSNBRG00000017960	snrnp200	98	89.211	Neolamprologus_brichardi
ENSOPRG00000015464	SNRNP200	100	91.353	ENSNLEG00000000025	SNRNP200	100	91.353	Nomascus_leucogenys
ENSOPRG00000015464	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSOPRG00000015464	SNRNP200	100	95.646	ENSODEG00000008366	SNRNP200	100	95.646	Octodon_degus
ENSOPRG00000015464	SNRNP200	96	89.371	ENSONIG00000010714	snrnp200	96	89.251	Oreochromis_niloticus
ENSOPRG00000015464	SNRNP200	100	95.927	ENSOCUG00000009864	SNRNP200	100	95.927	Oryctolagus_cuniculus
ENSOPRG00000015464	SNRNP200	100	87.032	ENSORLG00000012286	snrnp200	100	89.187	Oryzias_latipes
ENSOPRG00000015464	SNRNP200	100	87.079	ENSORLG00020004648	snrnp200	96	89.251	Oryzias_latipes_hni
ENSOPRG00000015464	SNRNP200	100	87.032	ENSORLG00015019114	snrnp200	100	89.260	Oryzias_latipes_hsok
ENSOPRG00000015464	SNRNP200	99	87.271	ENSOMEG00000011834	snrnp200	96	89.348	Oryzias_melastigma
ENSOPRG00000015464	SNRNP200	100	95.974	ENSOGAG00000006879	SNRNP200	100	95.974	Otolemur_garnettii
ENSOPRG00000015464	SNRNP200	100	94.572	ENSOARG00000013949	SNRNP200	100	94.572	Ovis_aries
ENSOPRG00000015464	SNRNP200	100	95.974	ENSPPAG00000041559	SNRNP200	100	95.974	Pan_paniscus
ENSOPRG00000015464	SNRNP200	100	95.974	ENSPPRG00000004435	SNRNP200	100	95.974	Panthera_pardus
ENSOPRG00000015464	SNRNP200	100	95.506	ENSPTIG00000006380	SNRNP200	100	95.506	Panthera_tigris_altaica
ENSOPRG00000015464	SNRNP200	100	95.974	ENSPTRG00000012230	SNRNP200	100	95.974	Pan_troglodytes
ENSOPRG00000015464	SNRNP200	100	95.927	ENSPANG00000006017	SNRNP200	100	95.927	Papio_anubis
ENSOPRG00000015464	SNRNP200	100	87.828	ENSPKIG00000014762	snrnp200	99	90.015	Paramormyrops_kingsleyae
ENSOPRG00000015464	SNRNP200	100	92.840	ENSPSIG00000008580	SNRNP200	100	92.840	Pelodiscus_sinensis
ENSOPRG00000015464	SNRNP200	100	95.037	ENSPCIG00000023050	SNRNP200	100	95.037	Phascolarctos_cinereus
ENSOPRG00000015464	SNRNP200	100	87.038	ENSPFOG00000015110	snrnp200	96	89.256	Poecilia_formosa
ENSOPRG00000015464	SNRNP200	96	89.069	ENSPLAG00000006711	snrnp200	97	89.056	Poecilia_latipinna
ENSOPRG00000015464	SNRNP200	96	89.069	ENSPMEG00000021166	snrnp200	97	89.056	Poecilia_mexicana
ENSOPRG00000015464	SNRNP200	100	87.125	ENSPREG00000008875	snrnp200	96	89.348	Poecilia_reticulata
ENSOPRG00000015464	SNRNP200	100	95.974	ENSPPYG00000012068	SNRNP200	100	95.974	Pongo_abelii
ENSOPRG00000015464	SNRNP200	90	99.683	ENSPCAG00000008536	SNRNP200	81	99.683	Procavia_capensis
ENSOPRG00000015464	SNRNP200	100	95.974	ENSPCOG00000024608	SNRNP200	100	95.974	Propithecus_coquereli
ENSOPRG00000015464	SNRNP200	96	98.260	ENSPVAG00000005860	SNRNP200	93	98.260	Pteropus_vampyrus
ENSOPRG00000015464	SNRNP200	96	84.840	ENSPNYG00000017476	snrnp200	96	84.731	Pundamilia_nyererei
ENSOPRG00000015464	SNRNP200	100	82.725	ENSPNAG00000010998	snrnp200	96	84.728	Pygocentrus_nattereri
ENSOPRG00000015464	SNRNP200	100	95.880	ENSRNOG00000012157	Snrnp200	100	95.880	Rattus_norvegicus
ENSOPRG00000015464	SNRNP200	100	95.974	ENSRBIG00000044690	-	100	95.974	Rhinopithecus_bieti
ENSOPRG00000015464	SNRNP200	100	95.974	ENSRROG00000037952	-	100	95.974	Rhinopithecus_roxellana
ENSOPRG00000015464	SNRNP200	100	95.927	ENSSBOG00000035471	SNRNP200	97	99.115	Saimiri_boliviensis_boliviensis
ENSOPRG00000015464	SNRNP200	97	97.531	ENSSHAG00000000758	SNRNP200	99	97.531	Sarcophilus_harrisii
ENSOPRG00000015464	SNRNP200	99	88.163	ENSSFOG00015018826	snrnp200	96	90.272	Scleropages_formosus
ENSOPRG00000015464	SNRNP200	99	87.130	ENSSMAG00000005463	snrnp200	97	89.173	Scophthalmus_maximus
ENSOPRG00000015464	SNRNP200	99	87.412	ENSSDUG00000021410	snrnp200	96	89.494	Seriola_dumerili
ENSOPRG00000015464	SNRNP200	99	87.365	ENSSLDG00000010884	snrnp200	96	89.446	Seriola_lalandi_dorsalis
ENSOPRG00000015464	SNRNP200	95	93.496	ENSSARG00000010728	SNRNP200	96	93.496	Sorex_araneus
ENSOPRG00000015464	SNRNP200	100	93.633	ENSSPUG00000003726	-	96	96.060	Sphenodon_punctatus
ENSOPRG00000015464	SNRNP200	99	87.459	ENSSPAG00000001842	snrnp200	97	89.445	Stegastes_partitus
ENSOPRG00000015464	SNRNP200	100	95.787	ENSSSCG00000008127	SNRNP200	98	98.054	Sus_scrofa
ENSOPRG00000015464	SNRNP200	96	85.933	ENSTGUG00000014475	-	96	85.879	Taeniopygia_guttata
ENSOPRG00000015464	SNRNP200	99	87.130	ENSTRUG00000001307	snrnp200	96	89.202	Takifugu_rubripes
ENSOPRG00000015464	SNRNP200	96	84.017	ENSTNIG00000004320	snrnp200	96	83.994	Tetraodon_nigroviridis
ENSOPRG00000015464	SNRNP200	79	100.000	ENSTBEG00000003329	-	63	100.000	Tupaia_belangeri
ENSOPRG00000015464	SNRNP200	100	95.599	ENSTTRG00000004983	SNRNP200	100	95.599	Tursiops_truncatus
ENSOPRG00000015464	SNRNP200	75	84.884	ENSUAMG00000008395	-	95	84.884	Ursus_americanus
ENSOPRG00000015464	SNRNP200	100	95.974	ENSUMAG00000012385	SNRNP200	100	95.974	Ursus_maritimus
ENSOPRG00000015464	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSOPRG00000015464	SNRNP200	100	95.750	ENSVVUG00000026247	SNRNP200	98	98.323	Vulpes_vulpes
ENSOPRG00000015464	SNRNP200	100	90.743	ENSXETG00000001243	snrnp200	96	93.055	Xenopus_tropicalis
ENSOPRG00000015464	SNRNP200	96	89.408	ENSXMAG00000002058	snrnp200	97	89.396	Xiphophorus_maculatus