EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000015471 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Plus strand
Length: 56108 bases
Position: chrGeneScaffold_677:108769-164876
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000014133	zf-U11-48K	PF05253.12	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000015473	SNRNP48-201	954	-	ENSOPRP00000014133	318 (aa)	-	UPI0001777227

Gene Model

Click here to download ENSOPRG00000015471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000015471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000015471	SNRNP48	100	78.019	ENSG00000168566	SNRNP48	95	78.019	Homo_sapiens
ENSOPRG00000015471	SNRNP48	86	45.230	ENSAPOG00000021430	snrnp48	83	45.296	Acanthochromis_polyacanthus
ENSOPRG00000015471	SNRNP48	100	77.644	ENSAMEG00000017349	SNRNP48	96	77.039	Ailuropoda_melanoleuca
ENSOPRG00000015471	SNRNP48	92	43.960	ENSACIG00000002032	snrnp48	82	45.000	Amphilophus_citrinellus
ENSOPRG00000015471	SNRNP48	86	45.583	ENSAOCG00000010562	snrnp48	83	44.948	Amphiprion_ocellaris
ENSOPRG00000015471	SNRNP48	86	45.196	ENSAPEG00000003231	snrnp48	83	45.263	Amphiprion_percula
ENSOPRG00000015471	SNRNP48	88	46.853	ENSATEG00000020210	snrnp48	80	47.826	Anabas_testudineus
ENSOPRG00000015471	SNRNP48	83	59.859	ENSACAG00000002811	SNRNP48	85	59.431	Anolis_carolinensis
ENSOPRG00000015471	SNRNP48	100	78.328	ENSANAG00000033538	SNRNP48	95	78.328	Aotus_nancymaae
ENSOPRG00000015471	SNRNP48	98	46.894	ENSAMXG00000015309	snrnp48	92	46.584	Astyanax_mexicanus
ENSOPRG00000015471	SNRNP48	99	74.303	ENSBTAG00000001123	SNRNP48	95	74.923	Bos_taurus
ENSOPRG00000015471	SNRNP48	100	78.328	ENSCJAG00000021330	SNRNP48	95	78.328	Callithrix_jacchus
ENSOPRG00000015471	SNRNP48	99	78.750	ENSCAFG00000009574	SNRNP48	79	77.950	Canis_familiaris
ENSOPRG00000015471	SNRNP48	99	78.571	ENSCAFG00020013203	SNRNP48	95	77.950	Canis_lupus_dingo
ENSOPRG00000015471	SNRNP48	100	75.309	ENSCHIG00000015216	SNRNP48	95	75.926	Capra_hircus
ENSOPRG00000015471	SNRNP48	100	76.780	ENSTSYG00000000698	SNRNP48	95	76.780	Carlito_syrichta
ENSOPRG00000015471	SNRNP48	90	75.945	ENSCAPG00000006768	SNRNP48	95	76.289	Cavia_aperea
ENSOPRG00000015471	SNRNP48	100	77.090	ENSCPOG00000007910	SNRNP48	95	77.709	Cavia_porcellus
ENSOPRG00000015471	SNRNP48	100	76.780	ENSCCAG00000035652	SNRNP48	95	76.780	Cebus_capucinus
ENSOPRG00000015471	SNRNP48	100	78.328	ENSCATG00000033947	SNRNP48	95	78.019	Cercocebus_atys
ENSOPRG00000015471	SNRNP48	100	78.328	ENSCLAG00000003765	SNRNP48	95	78.638	Chinchilla_lanigera
ENSOPRG00000015471	SNRNP48	100	78.328	ENSCSAG00000007409	SNRNP48	95	78.328	Chlorocebus_sabaeus
ENSOPRG00000015471	SNRNP48	85	62.021	ENSCPBG00000019146	SNRNP48	89	61.672	Chrysemys_picta_bellii
ENSOPRG00000015471	SNRNP48	92	30.667	ENSCING00000004121	-	75	31.439	Ciona_intestinalis
ENSOPRG00000015471	SNRNP48	100	78.019	ENSCANG00000030017	SNRNP48	95	78.019	Colobus_angolensis_palliatus
ENSOPRG00000015471	SNRNP48	100	78.019	ENSCGRG00001001076	-	95	78.328	Cricetulus_griseus_chok1gshd
ENSOPRG00000015471	SNRNP48	100	62.733	ENSCGRG00001008805	-	91	62.305	Cricetulus_griseus_chok1gshd
ENSOPRG00000015471	SNRNP48	100	78.019	ENSCGRG00000007781	Snrnp48	95	78.328	Cricetulus_griseus_crigri
ENSOPRG00000015471	SNRNP48	78	48.016	ENSCSEG00000000722	snrnp48	70	48.016	Cynoglossus_semilaevis
ENSOPRG00000015471	SNRNP48	98	45.652	ENSCVAG00000019829	snrnp48	65	50.781	Cyprinodon_variegatus
ENSOPRG00000015471	SNRNP48	86	45.161	ENSDARG00000039989	snrnp48	91	43.590	Danio_rerio
ENSOPRG00000015471	SNRNP48	100	76.543	ENSDNOG00000014978	SNRNP48	99	73.723	Dasypus_novemcinctus
ENSOPRG00000015471	SNRNP48	100	77.160	ENSDORG00000015140	Snrnp48	95	77.778	Dipodomys_ordii
ENSOPRG00000015471	SNRNP48	100	77.709	ENSEASG00005012021	SNRNP48	95	78.019	Equus_asinus_asinus
ENSOPRG00000015471	SNRNP48	100	78.019	ENSECAG00000026937	SNRNP48	95	78.328	Equus_caballus
ENSOPRG00000015471	SNRNP48	97	60.828	ENSEEUG00000015437	SNRNP48	95	60.802	Erinaceus_europaeus
ENSOPRG00000015471	SNRNP48	93	45.902	ENSELUG00000009766	snrnp48	78	47.518	Esox_lucius
ENSOPRG00000015471	SNRNP48	100	78.019	ENSFCAG00000018853	SNRNP48	95	78.019	Felis_catus
ENSOPRG00000015471	SNRNP48	84	58.904	ENSFALG00000007797	SNRNP48	89	63.082	Ficedula_albicollis
ENSOPRG00000015471	SNRNP48	100	77.709	ENSFDAG00000009231	SNRNP48	95	78.019	Fukomys_damarensis
ENSOPRG00000015471	SNRNP48	62	54.950	ENSFHEG00000014647	snrnp48	80	51.931	Fundulus_heteroclitus
ENSOPRG00000015471	SNRNP48	98	42.284	ENSGMOG00000018599	-	98	41.640	Gadus_morhua
ENSOPRG00000015471	SNRNP48	81	65.683	ENSGALG00000013005	SNRNP48	92	65.314	Gallus_gallus
ENSOPRG00000015471	SNRNP48	77	51.613	ENSGAFG00000021639	snrnp48	80	47.857	Gambusia_affinis
ENSOPRG00000015471	SNRNP48	77	48.400	ENSGACG00000017756	-	89	42.991	Gasterosteus_aculeatus
ENSOPRG00000015471	SNRNP48	85	60.976	ENSGAGG00000000865	SNRNP48	93	60.627	Gopherus_agassizii
ENSOPRG00000015471	SNRNP48	100	78.328	ENSGGOG00000013220	SNRNP48	95	78.328	Gorilla_gorilla
ENSOPRG00000015471	SNRNP48	78	49.407	ENSHBUG00000017066	snrnp48	82	46.853	Haplochromis_burtoni
ENSOPRG00000015471	SNRNP48	100	78.947	ENSHGLG00000015241	SNRNP48	95	79.257	Heterocephalus_glaber_female
ENSOPRG00000015471	SNRNP48	100	78.947	ENSHGLG00100010027	SNRNP48	95	79.257	Heterocephalus_glaber_male
ENSOPRG00000015471	SNRNP48	75	45.902	ENSHCOG00000014066	snrnp48	87	41.304	Hippocampus_comes
ENSOPRG00000015471	SNRNP48	100	80.495	ENSSTOG00000014635	SNRNP48	95	80.805	Ictidomys_tridecemlineatus
ENSOPRG00000015471	SNRNP48	100	75.232	ENSJJAG00000011495	Snrnp48	95	75.542	Jaculus_jaculus
ENSOPRG00000015471	SNRNP48	91	44.218	ENSKMAG00000016514	snrnp48	88	42.357	Kryptolebias_marmoratus
ENSOPRG00000015471	SNRNP48	81	46.923	ENSLBEG00000026249	snrnp48	82	46.479	Labrus_bergylta
ENSOPRG00000015471	SNRNP48	98	52.500	ENSLACG00000003958	SNRNP48	96	50.453	Latimeria_chalumnae
ENSOPRG00000015471	SNRNP48	88	50.000	ENSLOCG00000004187	snrnp48	91	47.812	Lepisosteus_oculatus
ENSOPRG00000015471	SNRNP48	100	76.780	ENSLAFG00000011152	SNRNP48	95	76.780	Loxodonta_africana
ENSOPRG00000015471	SNRNP48	100	78.328	ENSMFAG00000045216	SNRNP48	95	78.328	Macaca_fascicularis
ENSOPRG00000015471	SNRNP48	100	78.328	ENSMMUG00000014785	SNRNP48	95	78.328	Macaca_mulatta
ENSOPRG00000015471	SNRNP48	100	78.638	ENSMNEG00000042269	SNRNP48	95	78.638	Macaca_nemestrina
ENSOPRG00000015471	SNRNP48	100	78.328	ENSMLEG00000034004	SNRNP48	95	78.328	Mandrillus_leucophaeus
ENSOPRG00000015471	SNRNP48	82	46.442	ENSMAMG00000018673	snrnp48	74	46.181	Mastacembelus_armatus
ENSOPRG00000015471	SNRNP48	83	64.388	ENSMGAG00000006037	SNRNP48	94	64.388	Meleagris_gallopavo
ENSOPRG00000015471	SNRNP48	100	78.019	ENSMAUG00000011944	Snrnp48	95	78.638	Mesocricetus_auratus
ENSOPRG00000015471	SNRNP48	100	78.328	ENSMICG00000012497	SNRNP48	95	78.328	Microcebus_murinus
ENSOPRG00000015471	SNRNP48	100	78.947	ENSMOCG00000015555	Snrnp48	95	79.567	Microtus_ochrogaster
ENSOPRG00000015471	SNRNP48	57	51.892	ENSMMOG00000003072	-	58	51.892	Mola_mola
ENSOPRG00000015471	SNRNP48	89	66.443	ENSMODG00000009996	SNRNP48	90	64.955	Monodelphis_domestica
ENSOPRG00000015471	SNRNP48	80	48.062	ENSMALG00000005725	snrnp48	82	46.290	Monopterus_albus
ENSOPRG00000015471	SNRNP48	100	78.638	MGP_CAROLIEiJ_G0018441	Snrnp48	95	79.257	Mus_caroli
ENSOPRG00000015471	SNRNP48	100	78.019	ENSMUSG00000021431	Snrnp48	95	78.638	Mus_musculus
ENSOPRG00000015471	SNRNP48	100	78.947	MGP_PahariEiJ_G0019509	Snrnp48	95	79.567	Mus_pahari
ENSOPRG00000015471	SNRNP48	100	77.709	MGP_SPRETEiJ_G0019321	Snrnp48	95	78.328	Mus_spretus
ENSOPRG00000015471	SNRNP48	100	76.780	ENSNGAG00000004849	Snrnp48	95	77.090	Nannospalax_galili
ENSOPRG00000015471	SNRNP48	78	49.012	ENSNBRG00000012127	snrnp48	88	43.210	Neolamprologus_brichardi
ENSOPRG00000015471	SNRNP48	100	78.328	ENSNLEG00000011667	SNRNP48	95	78.328	Nomascus_leucogenys
ENSOPRG00000015471	SNRNP48	78	49.407	ENSONIG00000001520	snrnp48	88	44.795	Oreochromis_niloticus
ENSOPRG00000015471	SNRNP48	60	57.212	ENSOANG00000019888	-	100	58.173	Ornithorhynchus_anatinus
ENSOPRG00000015471	SNRNP48	85	83.456	ENSOCUG00000005168	SNRNP48	96	83.103	Oryctolagus_cuniculus
ENSOPRG00000015471	SNRNP48	92	46.382	ENSORLG00000015654	snrnp48	82	47.387	Oryzias_latipes
ENSOPRG00000015471	SNRNP48	92	46.382	ENSORLG00020015976	snrnp48	70	47.038	Oryzias_latipes_hni
ENSOPRG00000015471	SNRNP48	92	47.368	ENSORLG00015022379	snrnp48	70	48.084	Oryzias_latipes_hsok
ENSOPRG00000015471	SNRNP48	87	46.503	ENSOMEG00000022007	snrnp48	82	46.853	Oryzias_melastigma
ENSOPRG00000015471	SNRNP48	97	78.846	ENSOGAG00000005275	SNRNP48	96	79.180	Otolemur_garnettii
ENSOPRG00000015471	SNRNP48	84	77.860	ENSOARG00000017319	SNRNP48	94	77.860	Ovis_aries
ENSOPRG00000015471	SNRNP48	100	78.328	ENSPPAG00000032873	SNRNP48	95	78.328	Pan_paniscus
ENSOPRG00000015471	SNRNP48	100	77.709	ENSPPRG00000004283	SNRNP48	95	77.709	Panthera_pardus
ENSOPRG00000015471	SNRNP48	84	79.705	ENSPTIG00000013502	SNRNP48	94	79.705	Panthera_tigris_altaica
ENSOPRG00000015471	SNRNP48	100	78.328	ENSPTRG00000017703	SNRNP48	95	78.328	Pan_troglodytes
ENSOPRG00000015471	SNRNP48	100	78.328	ENSPANG00000000771	SNRNP48	95	78.328	Papio_anubis
ENSOPRG00000015471	SNRNP48	91	46.382	ENSPKIG00000013703	snrnp48	59	47.857	Paramormyrops_kingsleyae
ENSOPRG00000015471	SNRNP48	84	59.507	ENSPSIG00000002213	SNRNP48	90	59.155	Pelodiscus_sinensis
ENSOPRG00000015471	SNRNP48	79	45.136	ENSPMGG00000008120	snrnp48	97	43.636	Periophthalmus_magnuspinnatus
ENSOPRG00000015471	SNRNP48	100	78.947	ENSPEMG00000008872	Snrnp48	95	79.567	Peromyscus_maniculatus_bairdii
ENSOPRG00000015471	SNRNP48	77	52.016	ENSPFOG00000003578	snrnp48	86	45.659	Poecilia_formosa
ENSOPRG00000015471	SNRNP48	70	50.220	ENSPLAG00000002290	snrnp48	77	50.220	Poecilia_latipinna
ENSOPRG00000015471	SNRNP48	77	51.210	ENSPMEG00000018033	snrnp48	86	45.016	Poecilia_mexicana
ENSOPRG00000015471	SNRNP48	75	50.820	ENSPREG00000018541	snrnp48	80	48.214	Poecilia_reticulata
ENSOPRG00000015471	SNRNP48	100	77.709	ENSPPYG00000016209	SNRNP48	95	77.709	Pongo_abelii
ENSOPRG00000015471	SNRNP48	77	67.200	ENSPCAG00000011991	SNRNP48	98	67.300	Procavia_capensis
ENSOPRG00000015471	SNRNP48	100	75.542	ENSPVAG00000002854	SNRNP48	95	75.542	Pteropus_vampyrus
ENSOPRG00000015471	SNRNP48	78	49.012	ENSPNYG00000015399	snrnp48	96	44.479	Pundamilia_nyererei
ENSOPRG00000015471	SNRNP48	100	78.328	ENSRNOG00000013756	Snrnp48	95	78.947	Rattus_norvegicus
ENSOPRG00000015471	SNRNP48	96	77.742	ENSRBIG00000043856	SNRNP48	97	78.176	Rhinopithecus_bieti
ENSOPRG00000015471	SNRNP48	100	78.019	ENSRROG00000043229	SNRNP48	95	78.019	Rhinopithecus_roxellana
ENSOPRG00000015471	SNRNP48	100	78.328	ENSSBOG00000019486	SNRNP48	95	78.328	Saimiri_boliviensis_boliviensis
ENSOPRG00000015471	SNRNP48	89	65.449	ENSSHAG00000014483	SNRNP48	96	64.371	Sarcophilus_harrisii
ENSOPRG00000015471	SNRNP48	78	49.407	ENSSFOG00015006610	snrnp48	60	49.609	Scleropages_formosus
ENSOPRG00000015471	SNRNP48	88	46.207	ENSSDUG00000014953	snrnp48	88	45.098	Seriola_dumerili
ENSOPRG00000015471	SNRNP48	88	47.241	ENSSLDG00000005989	snrnp48	88	46.078	Seriola_lalandi_dorsalis
ENSOPRG00000015471	SNRNP48	80	62.082	ENSSPUG00000006257	SNRNP48	81	60.211	Sphenodon_punctatus
ENSOPRG00000015471	SNRNP48	79	46.094	ENSSPAG00000006454	snrnp48	80	46.403	Stegastes_partitus
ENSOPRG00000015471	SNRNP48	84	61.511	ENSTGUG00000007575	SNRNP48	89	61.151	Taeniopygia_guttata
ENSOPRG00000015471	SNRNP48	75	50.207	ENSTRUG00000007031	snrnp48	71	50.410	Takifugu_rubripes
ENSOPRG00000015471	SNRNP48	97	42.765	ENSTNIG00000012977	-	75	46.614	Tetraodon_nigroviridis
ENSOPRG00000015471	SNRNP48	82	80.075	ENSTBEG00000015620	SNRNP48	79	80.075	Tupaia_belangeri
ENSOPRG00000015471	SNRNP48	100	75.851	ENSTTRG00000016715	SNRNP48	95	75.851	Tursiops_truncatus
ENSOPRG00000015471	SNRNP48	100	79.503	ENSUAMG00000003690	SNRNP48	95	78.882	Ursus_americanus
ENSOPRG00000015471	SNRNP48	82	79.087	ENSVPAG00000003557	SNRNP48	94	78.229	Vicugna_pacos
ENSOPRG00000015471	SNRNP48	99	77.950	ENSVVUG00000004996	SNRNP48	95	77.329	Vulpes_vulpes
ENSOPRG00000015471	SNRNP48	94	52.751	ENSXETG00000020447	snrnp48	94	49.695	Xenopus_tropicalis
ENSOPRG00000015471	SNRNP48	72	49.145	ENSXCOG00000004478	snrnp48	69	50.877	Xiphophorus_couchianus
ENSOPRG00000015471	SNRNP48	77	52.419	ENSXMAG00000013595	snrnp48	86	45.981	Xiphophorus_maculatus