EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOPRG00000016279 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 10805 bases
Position: chrGeneScaffold_3785:8321-19125
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000014861	Fox-1_C	PF12414.8	6.2e-19	1	1
ENSOPRP00000014861	RRM_1	PF00076.22	3.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000016268	-	1059	-	ENSOPRP00000014861	352 (aa)	-	UPI00017A1FA2

Gene Model

Click here to download ENSOPRG00000016279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000016279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOPRG00000016279	-	79	65.789	ENSOPRG00000014878	RBFOX2	58	65.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000016279	-	69	96.629	ENSG00000167281	RBFOX3	99	78.161	Homo_sapiens
ENSOPRG00000016279	-	79	74.611	ENSAPOG00000021630	rbfox3b	70	76.562	Acanthochromis_polyacanthus
ENSOPRG00000016279	-	58	77.124	ENSAPOG00000015658	-	52	77.333	Acanthochromis_polyacanthus
ENSOPRG00000016279	-	79	96.316	ENSAMEG00000014170	RBFOX3	74	96.316	Ailuropoda_melanoleuca
ENSOPRG00000016279	-	64	75.138	ENSACIG00000010817	rbfox3b	64	82.759	Amphilophus_citrinellus
ENSOPRG00000016279	-	54	73.958	ENSACIG00000003768	-	53	73.958	Amphilophus_citrinellus
ENSOPRG00000016279	-	77	76.562	ENSAOCG00000010786	-	71	76.166	Amphiprion_ocellaris
ENSOPRG00000016279	-	71	81.667	ENSAOCG00000012358	rbfox3b	68	76.963	Amphiprion_ocellaris
ENSOPRG00000016279	-	66	74.611	ENSAPEG00000019081	rbfox3b	64	80.000	Amphiprion_percula
ENSOPRG00000016279	-	74	76.166	ENSAPEG00000015891	-	62	76.166	Amphiprion_percula
ENSOPRG00000016279	-	66	78.571	ENSATEG00000019945	rbfox3b	63	75.758	Anabas_testudineus
ENSOPRG00000016279	-	64	79.032	ENSATEG00000023101	-	69	75.806	Anabas_testudineus
ENSOPRG00000016279	-	71	91.667	ENSACAG00000016093	RBFOX3	70	91.667	Anolis_carolinensis
ENSOPRG00000016279	-	65	94.675	ENSANAG00000023457	RBFOX3	73	94.675	Aotus_nancymaae
ENSOPRG00000016279	-	79	75.000	ENSACLG00000020011	rbfox3b	71	81.667	Astatotilapia_calliptera
ENSOPRG00000016279	-	71	85.246	ENSACLG00000025552	-	68	86.885	Astatotilapia_calliptera
ENSOPRG00000016279	-	71	86.885	ENSAMXG00000037246	rbfox3a	76	86.885	Astyanax_mexicanus
ENSOPRG00000016279	-	71	76.667	ENSAMXG00000042841	rbfox3b	72	70.466	Astyanax_mexicanus
ENSOPRG00000016279	-	65	93.333	ENSBTAG00000006280	RBFOX3	60	93.333	Bos_taurus
ENSOPRG00000016279	-	65	93.865	ENSCJAG00000009563	RBFOX3	74	94.675	Callithrix_jacchus
ENSOPRG00000016279	-	54	99.038	ENSCAFG00000005547	RBFOX3	73	99.038	Canis_familiaris
ENSOPRG00000016279	-	75	96.629	ENSCAFG00020008126	RBFOX3	68	96.629	Canis_lupus_dingo
ENSOPRG00000016279	-	73	94.675	ENSCHIG00000009124	RBFOX3	65	94.675	Capra_hircus
ENSOPRG00000016279	-	63	96.933	ENSTSYG00000029617	RBFOX3	62	96.933	Carlito_syrichta
ENSOPRG00000016279	-	75	96.629	ENSCPOG00000021703	RBFOX3	68	96.629	Cavia_porcellus
ENSOPRG00000016279	-	65	94.675	ENSCCAG00000028450	RBFOX3	73	94.675	Cebus_capucinus
ENSOPRG00000016279	-	68	96.629	ENSCATG00000018349	RBFOX3	76	96.629	Cercocebus_atys
ENSOPRG00000016279	-	75	97.753	ENSCLAG00000006449	RBFOX3	68	97.753	Chinchilla_lanigera
ENSOPRG00000016279	-	68	97.191	ENSCSAG00000002355	RBFOX3	76	97.191	Chlorocebus_sabaeus
ENSOPRG00000016279	-	78	87.831	ENSCPBG00000010904	RBFOX3	77	87.831	Chrysemys_picta_bellii
ENSOPRG00000016279	-	75	97.191	ENSCANG00000043120	RBFOX3	76	97.191	Colobus_angolensis_palliatus
ENSOPRG00000016279	-	75	97.191	ENSCGRG00001019476	Rbfox3	68	97.191	Cricetulus_griseus_chok1gshd
ENSOPRG00000016279	-	75	97.191	ENSCGRG00000003268	Rbfox3	68	97.191	Cricetulus_griseus_crigri
ENSOPRG00000016279	-	68	64.865	ENSCSEG00000020606	RBFOX3	60	71.141	Cynoglossus_semilaevis
ENSOPRG00000016279	-	75	75.521	ENSCSEG00000015567	RBFOX3	70	75.521	Cynoglossus_semilaevis
ENSOPRG00000016279	-	71	81.667	ENSCVAG00000006882	rbfox3b	68	76.963	Cyprinodon_variegatus
ENSOPRG00000016279	-	71	86.885	ENSDARG00000010083	rbfox3a	77	86.885	Danio_rerio
ENSOPRG00000016279	-	79	71.264	ENSDARG00000074310	rbfox3b	90	67.368	Danio_rerio
ENSOPRG00000016279	-	58	93.333	ENSDNOG00000039391	RBFOX3	54	82.192	Dasypus_novemcinctus
ENSOPRG00000016279	-	65	88.333	ENSDORG00000005352	Rbfox3	57	86.667	Dipodomys_ordii
ENSOPRG00000016279	-	79	68.229	ENSEBUG00000002129	RBFOX3	76	68.229	Eptatretus_burgeri
ENSOPRG00000016279	-	68	96.629	ENSEASG00005005059	RBFOX3	76	96.629	Equus_asinus_asinus
ENSOPRG00000016279	-	68	97.191	ENSECAG00000023811	RBFOX3	76	97.191	Equus_caballus
ENSOPRG00000016279	-	73	91.716	ENSEEUG00000013974	RBFOX3	66	91.716	Erinaceus_europaeus
ENSOPRG00000016279	-	71	86.667	ENSELUG00000017963	rbfox3b	68	85.000	Esox_lucius
ENSOPRG00000016279	-	73	94.675	ENSFCAG00000002555	RBFOX3	75	94.675	Felis_catus
ENSOPRG00000016279	-	79	87.368	ENSFALG00000012288	RBFOX3	72	87.895	Ficedula_albicollis
ENSOPRG00000016279	-	75	97.191	ENSFDAG00000007489	RBFOX3	71	97.191	Fukomys_damarensis
ENSOPRG00000016279	-	68	81.667	ENSFHEG00000008550	rbfox3b	68	73.333	Fundulus_heteroclitus
ENSOPRG00000016279	-	75	70.115	ENSGMOG00000019304	-	62	73.134	Gadus_morhua
ENSOPRG00000016279	-	71	93.333	ENSGALG00000032889	RBFOX3	70	93.333	Gallus_gallus
ENSOPRG00000016279	-	65	80.000	ENSGAFG00000005025	rbfox3b	61	82.759	Gambusia_affinis
ENSOPRG00000016279	-	71	71.257	ENSGACG00000002138	-	64	71.257	Gasterosteus_aculeatus
ENSOPRG00000016279	-	79	87.368	ENSGAGG00000020025	RBFOX3	77	87.302	Gopherus_agassizii
ENSOPRG00000016279	-	75	96.629	ENSGGOG00000012546	RBFOX3	76	96.629	Gorilla_gorilla
ENSOPRG00000016279	-	79	75.000	ENSHBUG00000018099	rbfox3b	68	80.000	Haplochromis_burtoni
ENSOPRG00000016279	-	79	74.611	ENSHBUG00000023098	-	76	74.611	Haplochromis_burtoni
ENSOPRG00000016279	-	75	96.629	ENSHGLG00000008679	RBFOX3	68	96.629	Heterocephalus_glaber_female
ENSOPRG00000016279	-	75	96.629	ENSHGLG00100014739	RBFOX3	68	96.629	Heterocephalus_glaber_male
ENSOPRG00000016279	-	64	75.758	ENSHCOG00000007444	RBFOX3	57	76.074	Hippocampus_comes
ENSOPRG00000016279	-	67	72.376	ENSHCOG00000001863	RBFOX3	66	71.084	Hippocampus_comes
ENSOPRG00000016279	-	71	85.246	ENSIPUG00000012010	rbfox3a	76	85.246	Ictalurus_punctatus
ENSOPRG00000016279	-	68	72.472	ENSIPUG00000021966	rbfox3b	69	69.841	Ictalurus_punctatus
ENSOPRG00000016279	-	75	98.315	ENSSTOG00000026817	RBFOX3	81	98.315	Ictidomys_tridecemlineatus
ENSOPRG00000016279	-	75	96.067	ENSJJAG00000014167	Rbfox3	68	96.067	Jaculus_jaculus
ENSOPRG00000016279	-	71	81.667	ENSKMAG00000006726	rbfox3b	68	76.963	Kryptolebias_marmoratus
ENSOPRG00000016279	-	71	85.246	ENSLBEG00000022508	-	69	81.967	Labrus_bergylta
ENSOPRG00000016279	-	79	74.093	ENSLBEG00000004030	rbfox3b	68	80.000	Labrus_bergylta
ENSOPRG00000016279	-	52	61.290	ENSLACG00000000021	-	95	61.290	Latimeria_chalumnae
ENSOPRG00000016279	-	70	83.158	ENSLACG00000018409	-	74	83.158	Latimeria_chalumnae
ENSOPRG00000016279	-	79	81.347	ENSLOCG00000012267	rbfox3a	76	86.885	Lepisosteus_oculatus
ENSOPRG00000016279	-	79	93.684	ENSLAFG00000016623	RBFOX3	73	93.684	Loxodonta_africana
ENSOPRG00000016279	-	75	96.629	ENSMFAG00000002247	RBFOX3	66	96.629	Macaca_fascicularis
ENSOPRG00000016279	-	68	96.629	ENSMMUG00000023028	RBFOX3	76	96.629	Macaca_mulatta
ENSOPRG00000016279	-	75	96.629	ENSMNEG00000041147	RBFOX3	76	96.629	Macaca_nemestrina
ENSOPRG00000016279	-	68	96.629	ENSMLEG00000025686	RBFOX3	76	96.629	Mandrillus_leucophaeus
ENSOPRG00000016279	-	75	75.773	ENSMAMG00000020600	-	70	75.773	Mastacembelus_armatus
ENSOPRG00000016279	-	64	76.404	ENSMAMG00000019810	rbfox3b	63	82.759	Mastacembelus_armatus
ENSOPRG00000016279	-	79	75.000	ENSMZEG00005000781	rbfox3b	68	80.000	Maylandia_zebra
ENSOPRG00000016279	-	54	87.368	ENSMGAG00000005600	RBFOX3	72	87.895	Meleagris_gallopavo
ENSOPRG00000016279	-	75	96.648	ENSMAUG00000013543	Rbfox3	68	96.648	Mesocricetus_auratus
ENSOPRG00000016279	-	75	94.382	ENSMICG00000014898	RBFOX3	72	96.319	Microcebus_murinus
ENSOPRG00000016279	-	75	96.629	ENSMOCG00000015373	Rbfox3	68	96.629	Microtus_ochrogaster
ENSOPRG00000016279	-	78	76.042	ENSMMOG00000020193	rbfox3b	77	76.042	Mola_mola
ENSOPRG00000016279	-	71	91.667	ENSMODG00000002089	RBFOX3	70	91.667	Monodelphis_domestica
ENSOPRG00000016279	-	71	81.667	ENSMALG00000020407	rbfox3b	68	75.393	Monopterus_albus
ENSOPRG00000016279	-	79	76.684	ENSMALG00000018270	-	69	81.967	Monopterus_albus
ENSOPRG00000016279	-	75	97.753	MGP_CAROLIEiJ_G0017487	Rbfox3	100	97.633	Mus_caroli
ENSOPRG00000016279	-	75	97.191	ENSMUSG00000025576	Rbfox3	100	97.041	Mus_musculus
ENSOPRG00000016279	-	75	97.753	MGP_PahariEiJ_G0018614	Rbfox3	100	97.633	Mus_pahari
ENSOPRG00000016279	-	75	97.753	MGP_SPRETEiJ_G0018331	Rbfox3	100	97.633	Mus_spretus
ENSOPRG00000016279	-	79	95.789	ENSMPUG00000012319	RBFOX3	69	95.789	Mustela_putorius_furo
ENSOPRG00000016279	-	75	96.629	ENSNGAG00000018006	Rbfox3	68	96.629	Nannospalax_galili
ENSOPRG00000016279	-	67	72.775	ENSNBRG00000022885	-	67	72.775	Neolamprologus_brichardi
ENSOPRG00000016279	-	71	80.000	ENSNBRG00000010102	rbfox3b	68	76.440	Neolamprologus_brichardi
ENSOPRG00000016279	-	60	92.697	ENSNLEG00000000153	-	76	92.697	Nomascus_leucogenys
ENSOPRG00000016279	-	55	87.234	ENSMEUG00000004218	-	54	87.234	Notamacropus_eugenii
ENSOPRG00000016279	-	75	97.753	ENSODEG00000009433	RBFOX3	76	97.753	Octodon_degus
ENSOPRG00000016279	-	71	85.246	ENSONIG00000007282	-	73	83.607	Oreochromis_niloticus
ENSOPRG00000016279	-	71	81.667	ENSONIG00000009549	rbfox3b	68	76.963	Oreochromis_niloticus
ENSOPRG00000016279	-	71	83.333	ENSORLG00000000905	rbfox3b	54	81.667	Oryzias_latipes
ENSOPRG00000016279	-	71	83.333	ENSORLG00020018030	rbfox3b	73	81.667	Oryzias_latipes_hni
ENSOPRG00000016279	-	71	81.667	ENSORLG00015009200	rbfox3b	73	80.000	Oryzias_latipes_hsok
ENSOPRG00000016279	-	54	70.192	ENSOMEG00000014677	rbfox3b	55	69.856	Oryzias_melastigma
ENSOPRG00000016279	-	79	95.789	ENSOGAG00000029595	RBFOX3	77	95.789	Otolemur_garnettii
ENSOPRG00000016279	-	78	74.747	ENSOARG00000002908	RBFOX3	74	74.747	Ovis_aries
ENSOPRG00000016279	-	51	96.629	ENSPPAG00000025383	RBFOX3	62	96.629	Pan_paniscus
ENSOPRG00000016279	-	65	93.333	ENSPPRG00000007819	RBFOX3	63	93.333	Panthera_pardus
ENSOPRG00000016279	-	75	96.629	ENSPTRG00000009727	RBFOX3	76	96.629	Pan_troglodytes
ENSOPRG00000016279	-	68	96.629	ENSPANG00000019837	RBFOX3	76	96.629	Papio_anubis
ENSOPRG00000016279	-	79	65.464	ENSPKIG00000022633	-	71	63.918	Paramormyrops_kingsleyae
ENSOPRG00000016279	-	78	80.208	ENSPKIG00000010299	rbfox3a	73	79.275	Paramormyrops_kingsleyae
ENSOPRG00000016279	-	54	78.238	ENSPMGG00000008000	rbfox3b	59	78.238	Periophthalmus_magnuspinnatus
ENSOPRG00000016279	-	75	97.753	ENSPEMG00000010500	Rbfox3	68	97.753	Peromyscus_maniculatus_bairdii
ENSOPRG00000016279	-	71	90.000	ENSPCIG00000005766	RBFOX3	68	90.000	Phascolarctos_cinereus
ENSOPRG00000016279	-	78	75.000	ENSPFOG00000018294	rbfox3b	69	76.963	Poecilia_formosa
ENSOPRG00000016279	-	51	82.727	ENSPLAG00000000481	rbfox3b	50	82.727	Poecilia_latipinna
ENSOPRG00000016279	-	68	81.667	ENSPMEG00000022997	rbfox3b	68	73.333	Poecilia_mexicana
ENSOPRG00000016279	-	71	81.667	ENSPREG00000012886	rbfox3b	72	77.202	Poecilia_reticulata
ENSOPRG00000016279	-	79	95.789	ENSPPYG00000008704	RBFOX3	82	95.789	Pongo_abelii
ENSOPRG00000016279	-	63	88.525	ENSPCAG00000001401	RBFOX3	62	88.525	Procavia_capensis
ENSOPRG00000016279	-	73	94.382	ENSPCOG00000012689	RBFOX3	63	96.319	Propithecus_coquereli
ENSOPRG00000016279	-	63	90.184	ENSPVAG00000015243	RBFOX3	62	90.184	Pteropus_vampyrus
ENSOPRG00000016279	-	63	80.645	ENSPNYG00000009079	-	61	82.759	Pundamilia_nyererei
ENSOPRG00000016279	-	62	78.571	ENSPNYG00000010414	rbfox3b	64	78.571	Pundamilia_nyererei
ENSOPRG00000016279	-	64	77.083	ENSPNAG00000018173	rbfox3b	54	79.310	Pygocentrus_nattereri
ENSOPRG00000016279	-	71	86.885	ENSPNAG00000002889	rbfox3a	68	86.885	Pygocentrus_nattereri
ENSOPRG00000016279	-	75	97.753	ENSRNOG00000003386	Rbfox3	76	97.753	Rattus_norvegicus
ENSOPRG00000016279	-	71	96.316	ENSRBIG00000040449	RBFOX3	70	96.316	Rhinopithecus_bieti
ENSOPRG00000016279	-	68	97.191	ENSRROG00000000766	RBFOX3	76	97.191	Rhinopithecus_roxellana
ENSOPRG00000016279	-	73	94.675	ENSSBOG00000031591	RBFOX3	73	94.675	Saimiri_boliviensis_boliviensis
ENSOPRG00000016279	-	79	89.474	ENSSHAG00000016076	RBFOX3	73	89.474	Sarcophilus_harrisii
ENSOPRG00000016279	-	78	80.729	ENSSFOG00015023260	rbfox3a	73	86.885	Scleropages_formosus
ENSOPRG00000016279	-	71	69.588	ENSSFOG00015004716	RBFOX3	71	69.588	Scleropages_formosus
ENSOPRG00000016279	-	71	81.667	ENSSMAG00000012618	rbfox3b	58	80.000	Scophthalmus_maximus
ENSOPRG00000016279	-	71	78.689	ENSSMAG00000019052	-	72	70.482	Scophthalmus_maximus
ENSOPRG00000016279	-	79	74.093	ENSSDUG00000015801	-	76	74.093	Seriola_dumerili
ENSOPRG00000016279	-	68	81.667	ENSSDUG00000023183	rbfox3b	68	73.333	Seriola_dumerili
ENSOPRG00000016279	-	75	74.479	ENSSLDG00000016098	-	61	82.759	Seriola_lalandi_dorsalis
ENSOPRG00000016279	-	71	81.667	ENSSLDG00000000149	rbfox3b	68	80.000	Seriola_lalandi_dorsalis
ENSOPRG00000016279	-	71	90.000	ENSSPUG00000011733	RBFOX3	71	90.000	Sphenodon_punctatus
ENSOPRG00000016279	-	68	75.000	ENSSPAG00000017571	rbfox3b	65	82.759	Stegastes_partitus
ENSOPRG00000016279	-	53	88.235	ENSSPAG00000004898	-	52	69.461	Stegastes_partitus
ENSOPRG00000016279	-	63	94.776	ENSSSCG00000039498	RBFOX3	63	94.776	Sus_scrofa
ENSOPRG00000016279	-	78	76.720	ENSTRUG00000004894	rbfox3b	77	75.635	Takifugu_rubripes
ENSOPRG00000016279	-	79	74.611	ENSTNIG00000011278	rbfox3b	73	76.684	Tetraodon_nigroviridis
ENSOPRG00000016279	-	65	91.667	ENSTTRG00000003676	RBFOX3	64	91.667	Tursiops_truncatus
ENSOPRG00000016279	-	68	96.629	ENSUAMG00000004668	RBFOX3	76	96.629	Ursus_americanus
ENSOPRG00000016279	-	79	96.316	ENSVVUG00000017864	RBFOX3	76	96.629	Vulpes_vulpes
ENSOPRG00000016279	-	79	76.440	ENSXETG00000020236	rbfox3	73	76.440	Xenopus_tropicalis
ENSOPRG00000016279	-	71	80.000	ENSXCOG00000018262	rbfox3b	70	76.562	Xiphophorus_couchianus
ENSOPRG00000016279	-	79	74.611	ENSXMAG00000012939	rbfox3b	70	76.562	Xiphophorus_maculatus