EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOPRG00000016636 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Ochotona_princeps
Status: putative
Strand: Minus strand
Length: 18622 bases
Position: chrGeneScaffold_710:63224-81845
Accession: 101521734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOPRP00000015202	PRP21_like_P	PF12230.8	2.8e-52	1	1
ENSOPRP00000015202	Surp	PF01805.20	3.7e-46	1	2
ENSOPRP00000015202	Surp	PF01805.20	3.7e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOPRT00000016644	SF3A1-201	2382	-	ENSOPRP00000015202	793 (aa)	XP_004592037	UPI000177701A

Gene Model

Click here to download ENSOPRG00000016636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOPRG00000016636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOPRG00000016636	SF3A1	100	98.108	ENSG00000099995	SF3A1	100	98.108	Homo_sapiens
ENSOPRG00000016636	SF3A1	100	83.899	ENSAPOG00000020465	sf3a1	97	86.797	Acanthochromis_polyacanthus
ENSOPRG00000016636	SF3A1	100	98.239	ENSAMEG00000007737	SF3A1	100	98.239	Ailuropoda_melanoleuca
ENSOPRG00000016636	SF3A1	100	84.654	ENSACIG00000020672	sf3a1	98	86.198	Amphilophus_citrinellus
ENSOPRG00000016636	SF3A1	100	84.296	ENSAOCG00000003060	sf3a1	97	86.797	Amphiprion_ocellaris
ENSOPRG00000016636	SF3A1	100	84.422	ENSAPEG00000010735	sf3a1	97	86.928	Amphiprion_percula
ENSOPRG00000016636	SF3A1	96	86.198	ENSATEG00000021201	sf3a1	97	86.328	Anabas_testudineus
ENSOPRG00000016636	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.995	Anas_platyrhynchos
ENSOPRG00000016636	SF3A1	100	85.961	ENSACAG00000009415	SF3A1	97	88.761	Anolis_carolinensis
ENSOPRG00000016636	SF3A1	100	98.739	ENSANAG00000032045	SF3A1	100	98.739	Aotus_nancymaae
ENSOPRG00000016636	SF3A1	100	84.761	ENSACLG00000012622	sf3a1	99	86.434	Astatotilapia_calliptera
ENSOPRG00000016636	SF3A1	99	83.842	ENSAMXG00000005382	sf3a1	98	84.864	Astyanax_mexicanus
ENSOPRG00000016636	SF3A1	100	98.361	ENSBTAG00000003390	SF3A1	100	98.361	Bos_taurus
ENSOPRG00000016636	SF3A1	84	43.447	WBGene00004188	prp-21	94	43.141	Caenorhabditis_elegans
ENSOPRG00000016636	SF3A1	100	98.613	ENSCJAG00000010370	SF3A1	100	98.613	Callithrix_jacchus
ENSOPRG00000016636	SF3A1	100	98.361	ENSCAFG00000012559	SF3A1	100	98.361	Canis_familiaris
ENSOPRG00000016636	SF3A1	100	98.361	ENSCAFG00020000838	SF3A1	100	98.361	Canis_lupus_dingo
ENSOPRG00000016636	SF3A1	100	98.235	ENSCHIG00000018642	SF3A1	100	98.235	Capra_hircus
ENSOPRG00000016636	SF3A1	100	98.739	ENSTSYG00000004739	SF3A1	100	98.739	Carlito_syrichta
ENSOPRG00000016636	SF3A1	94	81.041	ENSCAPG00000015414	SF3A1	98	81.041	Cavia_aperea
ENSOPRG00000016636	SF3A1	100	98.487	ENSCPOG00000014589	SF3A1	100	98.487	Cavia_porcellus
ENSOPRG00000016636	SF3A1	100	98.739	ENSCCAG00000032006	SF3A1	100	98.739	Cebus_capucinus
ENSOPRG00000016636	SF3A1	100	98.361	ENSCATG00000029241	SF3A1	100	98.361	Cercocebus_atys
ENSOPRG00000016636	SF3A1	100	97.982	ENSCLAG00000006508	SF3A1	100	97.982	Chinchilla_lanigera
ENSOPRG00000016636	SF3A1	100	98.235	ENSCSAG00000009470	SF3A1	100	98.235	Chlorocebus_sabaeus
ENSOPRG00000016636	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSOPRG00000016636	SF3A1	100	91.310	ENSCPBG00000007595	SF3A1	97	92.941	Chrysemys_picta_bellii
ENSOPRG00000016636	SF3A1	94	52.249	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSOPRG00000016636	SF3A1	96	51.484	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSOPRG00000016636	SF3A1	100	98.235	ENSCANG00000033564	SF3A1	100	98.235	Colobus_angolensis_palliatus
ENSOPRG00000016636	SF3A1	100	97.856	ENSCGRG00001008933	Sf3a1	100	97.856	Cricetulus_griseus_chok1gshd
ENSOPRG00000016636	SF3A1	100	97.856	ENSCGRG00000006127	Sf3a1	100	97.856	Cricetulus_griseus_crigri
ENSOPRG00000016636	SF3A1	99	82.234	ENSCSEG00000010792	sf3a1	98	83.139	Cynoglossus_semilaevis
ENSOPRG00000016636	SF3A1	100	83.396	ENSCVAG00000004560	sf3a1	98	84.695	Cyprinodon_variegatus
ENSOPRG00000016636	SF3A1	100	82.789	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSOPRG00000016636	SF3A1	100	98.239	ENSDNOG00000010629	SF3A1	100	98.239	Dasypus_novemcinctus
ENSOPRG00000016636	SF3A1	100	98.613	ENSDORG00000005613	Sf3a1	100	98.613	Dipodomys_ordii
ENSOPRG00000016636	SF3A1	79	61.466	FBgn0266917	Sf3a1	85	59.206	Drosophila_melanogaster
ENSOPRG00000016636	SF3A1	84	97.006	ENSETEG00000017194	SF3A1	95	96.856	Echinops_telfairi
ENSOPRG00000016636	SF3A1	100	64.941	ENSEBUG00000001285	sf3a1	96	67.286	Eptatretus_burgeri
ENSOPRG00000016636	SF3A1	100	98.487	ENSEASG00005010254	SF3A1	100	98.487	Equus_asinus_asinus
ENSOPRG00000016636	SF3A1	100	98.487	ENSECAG00000023962	SF3A1	100	98.487	Equus_caballus
ENSOPRG00000016636	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSOPRG00000016636	SF3A1	100	82.581	ENSELUG00000022578	sf3a1	97	84.375	Esox_lucius
ENSOPRG00000016636	SF3A1	100	98.361	ENSFCAG00000011932	SF3A1	100	98.361	Felis_catus
ENSOPRG00000016636	SF3A1	95	93.254	ENSFALG00000006944	SF3A1	97	93.333	Ficedula_albicollis
ENSOPRG00000016636	SF3A1	100	98.361	ENSFDAG00000009560	SF3A1	100	98.361	Fukomys_damarensis
ENSOPRG00000016636	SF3A1	100	84.673	ENSFHEG00000010866	sf3a1	98	85.104	Fundulus_heteroclitus
ENSOPRG00000016636	SF3A1	100	81.635	ENSGMOG00000016024	sf3a1	97	81.971	Gadus_morhua
ENSOPRG00000016636	SF3A1	95	94.180	ENSGALG00000007937	SF3A1	97	93.856	Gallus_gallus
ENSOPRG00000016636	SF3A1	100	83.396	ENSGAFG00000009111	sf3a1	97	85.359	Gambusia_affinis
ENSOPRG00000016636	SF3A1	100	82.478	ENSGACG00000011893	sf3a1	97	83.901	Gasterosteus_aculeatus
ENSOPRG00000016636	SF3A1	96	91.590	ENSGAGG00000000762	SF3A1	96	93.169	Gopherus_agassizii
ENSOPRG00000016636	SF3A1	100	98.108	ENSGGOG00000012631	SF3A1	100	98.108	Gorilla_gorilla
ENSOPRG00000016636	SF3A1	100	84.761	ENSHBUG00000015795	sf3a1	99	86.434	Haplochromis_burtoni
ENSOPRG00000016636	SF3A1	100	98.487	ENSHGLG00000007907	SF3A1	100	98.487	Heterocephalus_glaber_female
ENSOPRG00000016636	SF3A1	100	98.487	ENSHGLG00100013799	SF3A1	100	98.487	Heterocephalus_glaber_male
ENSOPRG00000016636	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	98	81.226	Hippocampus_comes
ENSOPRG00000016636	SF3A1	96	82.422	ENSIPUG00000002470	sf3a1	98	82.682	Ictalurus_punctatus
ENSOPRG00000016636	SF3A1	100	98.487	ENSSTOG00000013892	SF3A1	100	98.487	Ictidomys_tridecemlineatus
ENSOPRG00000016636	SF3A1	100	98.741	ENSJJAG00000022566	Sf3a1	100	98.741	Jaculus_jaculus
ENSOPRG00000016636	SF3A1	100	83.417	ENSKMAG00000002400	sf3a1	98	84.994	Kryptolebias_marmoratus
ENSOPRG00000016636	SF3A1	100	83.417	ENSLBEG00000022974	sf3a1	98	84.436	Labrus_bergylta
ENSOPRG00000016636	SF3A1	100	86.700	ENSLACG00000003565	SF3A1	97	88.021	Latimeria_chalumnae
ENSOPRG00000016636	SF3A1	100	84.962	ENSLOCG00000008251	sf3a1	97	86.753	Lepisosteus_oculatus
ENSOPRG00000016636	SF3A1	98	61.529	ENSLAFG00000026032	-	97	61.954	Loxodonta_africana
ENSOPRG00000016636	SF3A1	100	98.235	ENSLAFG00000000448	SF3A1	100	98.235	Loxodonta_africana
ENSOPRG00000016636	SF3A1	100	98.108	ENSMFAG00000031979	SF3A1	100	98.108	Macaca_fascicularis
ENSOPRG00000016636	SF3A1	100	98.108	ENSMMUG00000005547	SF3A1	100	98.108	Macaca_mulatta
ENSOPRG00000016636	SF3A1	100	98.235	ENSMNEG00000037229	SF3A1	100	98.235	Macaca_nemestrina
ENSOPRG00000016636	SF3A1	100	98.235	ENSMLEG00000041908	SF3A1	100	98.235	Mandrillus_leucophaeus
ENSOPRG00000016636	SF3A1	97	86.287	ENSMAMG00000006460	sf3a1	96	86.417	Mastacembelus_armatus
ENSOPRG00000016636	SF3A1	100	84.761	ENSMZEG00005009633	sf3a1	99	86.434	Maylandia_zebra
ENSOPRG00000016636	SF3A1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.856	Meleagris_gallopavo
ENSOPRG00000016636	SF3A1	92	94.672	ENSMAUG00000020317	Sf3a1	99	90.722	Mesocricetus_auratus
ENSOPRG00000016636	SF3A1	100	98.361	ENSMICG00000010038	SF3A1	100	98.361	Microcebus_murinus
ENSOPRG00000016636	SF3A1	100	97.856	ENSMOCG00000008438	Sf3a1	100	97.856	Microtus_ochrogaster
ENSOPRG00000016636	SF3A1	100	81.910	ENSMMOG00000015588	sf3a1	97	83.073	Mola_mola
ENSOPRG00000016636	SF3A1	100	97.226	ENSMODG00000009270	SF3A1	100	97.226	Monodelphis_domestica
ENSOPRG00000016636	SF3A1	100	84.403	ENSMALG00000000148	sf3a1	99	86.240	Monopterus_albus
ENSOPRG00000016636	SF3A1	100	97.604	MGP_CAROLIEiJ_G0016029	Sf3a1	100	97.604	Mus_caroli
ENSOPRG00000016636	SF3A1	100	97.604	ENSMUSG00000002129	Sf3a1	100	97.604	Mus_musculus
ENSOPRG00000016636	SF3A1	100	97.478	MGP_PahariEiJ_G0016862	Sf3a1	100	97.478	Mus_pahari
ENSOPRG00000016636	SF3A1	100	97.604	MGP_SPRETEiJ_G0016870	Sf3a1	100	97.604	Mus_spretus
ENSOPRG00000016636	SF3A1	100	98.361	ENSMPUG00000013144	SF3A1	100	98.361	Mustela_putorius_furo
ENSOPRG00000016636	SF3A1	100	98.739	ENSMLUG00000002139	SF3A1	100	98.739	Myotis_lucifugus
ENSOPRG00000016636	SF3A1	100	98.108	ENSNGAG00000016977	Sf3a1	100	98.108	Nannospalax_galili
ENSOPRG00000016636	SF3A1	100	85.157	ENSNBRG00000016642	sf3a1	97	87.270	Neolamprologus_brichardi
ENSOPRG00000016636	SF3A1	100	98.235	ENSNLEG00000003686	SF3A1	100	98.235	Nomascus_leucogenys
ENSOPRG00000016636	SF3A1	96	87.632	ENSMEUG00000008741	SF3A1	97	87.364	Notamacropus_eugenii
ENSOPRG00000016636	SF3A1	100	98.487	ENSODEG00000002571	SF3A1	100	98.487	Octodon_degus
ENSOPRG00000016636	SF3A1	100	84.654	ENSONIG00000010848	sf3a1	99	85.806	Oreochromis_niloticus
ENSOPRG00000016636	SF3A1	100	98.991	ENSOCUG00000007633	SF3A1	100	98.991	Oryctolagus_cuniculus
ENSOPRG00000016636	SF3A1	96	82.700	ENSORLG00000013050	sf3a1	97	85.109	Oryzias_latipes
ENSOPRG00000016636	SF3A1	99	81.163	ENSORLG00020003236	sf3a1	92	85.246	Oryzias_latipes_hni
ENSOPRG00000016636	SF3A1	100	83.291	ENSORLG00015017411	sf3a1	97	85.490	Oryzias_latipes_hsok
ENSOPRG00000016636	SF3A1	100	82.893	ENSOMEG00000013362	sf3a1	98	84.375	Oryzias_melastigma
ENSOPRG00000016636	SF3A1	100	98.361	ENSOGAG00000012931	SF3A1	100	98.361	Otolemur_garnettii
ENSOPRG00000016636	SF3A1	100	96.469	ENSOARG00000006849	SF3A1	100	96.469	Ovis_aries
ENSOPRG00000016636	SF3A1	100	97.100	ENSPPAG00000041790	SF3A1	100	97.100	Pan_paniscus
ENSOPRG00000016636	SF3A1	100	98.361	ENSPPRG00000004391	SF3A1	100	98.361	Panthera_pardus
ENSOPRG00000016636	SF3A1	97	98.575	ENSPTIG00000000844	SF3A1	100	98.575	Panthera_tigris_altaica
ENSOPRG00000016636	SF3A1	100	98.108	ENSPTRG00000014240	SF3A1	100	98.108	Pan_troglodytes
ENSOPRG00000016636	SF3A1	100	98.235	ENSPANG00000020772	SF3A1	100	98.235	Papio_anubis
ENSOPRG00000016636	SF3A1	83	93.407	ENSPSIG00000012803	SF3A1	96	95.463	Pelodiscus_sinensis
ENSOPRG00000016636	SF3A1	96	84.424	ENSPMGG00000023096	sf3a1	100	84.424	Periophthalmus_magnuspinnatus
ENSOPRG00000016636	SF3A1	100	97.982	ENSPEMG00000009494	Sf3a1	100	97.982	Peromyscus_maniculatus_bairdii
ENSOPRG00000016636	SF3A1	69	77.495	ENSPMAG00000007139	-	89	79.507	Petromyzon_marinus
ENSOPRG00000016636	SF3A1	100	97.226	ENSPCIG00000022692	SF3A1	100	97.226	Phascolarctos_cinereus
ENSOPRG00000016636	SF3A1	100	75.503	ENSPFOG00000016768	sf3a1	93	79.184	Poecilia_formosa
ENSOPRG00000016636	SF3A1	100	84.171	ENSPLAG00000017268	sf3a1	97	85.621	Poecilia_latipinna
ENSOPRG00000016636	SF3A1	84	86.295	ENSPMEG00000019811	sf3a1	98	85.542	Poecilia_mexicana
ENSOPRG00000016636	SF3A1	100	84.296	ENSPREG00000010347	sf3a1	97	86.144	Poecilia_reticulata
ENSOPRG00000016636	SF3A1	100	98.235	ENSPPYG00000011707	SF3A1	100	98.235	Pongo_abelii
ENSOPRG00000016636	SF3A1	57	100.000	ENSPCAG00000003266	SF3A1	57	100.000	Procavia_capensis
ENSOPRG00000016636	SF3A1	100	98.361	ENSPCOG00000026630	SF3A1	100	98.361	Propithecus_coquereli
ENSOPRG00000016636	SF3A1	100	94.199	ENSPVAG00000017719	SF3A1	94	97.852	Pteropus_vampyrus
ENSOPRG00000016636	SF3A1	100	84.761	ENSPNYG00000018706	sf3a1	99	86.434	Pundamilia_nyererei
ENSOPRG00000016636	SF3A1	97	84.724	ENSPNAG00000003721	sf3a1	98	84.994	Pygocentrus_nattereri
ENSOPRG00000016636	SF3A1	100	98.108	ENSRNOG00000005218	Sf3a1	100	98.108	Rattus_norvegicus
ENSOPRG00000016636	SF3A1	100	98.235	ENSRBIG00000032167	SF3A1	100	98.235	Rhinopithecus_bieti
ENSOPRG00000016636	SF3A1	100	98.235	ENSRROG00000044908	SF3A1	100	98.235	Rhinopithecus_roxellana
ENSOPRG00000016636	SF3A1	92	99.181	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSOPRG00000016636	SF3A1	97	94.696	ENSSHAG00000003666	SF3A1	97	94.668	Sarcophilus_harrisii
ENSOPRG00000016636	SF3A1	100	83.875	ENSSFOG00015004579	sf3a1	98	86.176	Scleropages_formosus
ENSOPRG00000016636	SF3A1	100	81.750	ENSSMAG00000004275	sf3a1	97	83.529	Scophthalmus_maximus
ENSOPRG00000016636	SF3A1	100	84.250	ENSSDUG00000022219	sf3a1	99	85.419	Seriola_dumerili
ENSOPRG00000016636	SF3A1	100	84.250	ENSSLDG00000012642	sf3a1	99	85.419	Seriola_lalandi_dorsalis
ENSOPRG00000016636	SF3A1	97	95.855	ENSSARG00000005960	SF3A1	100	95.855	Sorex_araneus
ENSOPRG00000016636	SF3A1	96	92.228	ENSSPUG00000018863	SF3A1	97	93.161	Sphenodon_punctatus
ENSOPRG00000016636	SF3A1	100	85.553	ENSSPAG00000011856	sf3a1	97	86.797	Stegastes_partitus
ENSOPRG00000016636	SF3A1	100	98.235	ENSSSCG00000010002	SF3A1	100	98.235	Sus_scrofa
ENSOPRG00000016636	SF3A1	95	94.063	ENSTGUG00000010547	SF3A1	99	93.872	Taeniopygia_guttata
ENSOPRG00000016636	SF3A1	100	81.533	ENSTRUG00000006118	sf3a1	97	82.353	Takifugu_rubripes
ENSOPRG00000016636	SF3A1	64	81.041	ENSTNIG00000005713	sf3a1	89	85.714	Tetraodon_nigroviridis
ENSOPRG00000016636	SF3A1	100	90.921	ENSTBEG00000012771	SF3A1	100	90.921	Tupaia_belangeri
ENSOPRG00000016636	SF3A1	100	98.237	ENSTTRG00000001535	SF3A1	100	98.237	Tursiops_truncatus
ENSOPRG00000016636	SF3A1	99	97.332	ENSUAMG00000006750	SF3A1	99	97.332	Ursus_americanus
ENSOPRG00000016636	SF3A1	98	98.581	ENSUMAG00000016665	SF3A1	98	98.581	Ursus_maritimus
ENSOPRG00000016636	SF3A1	100	98.361	ENSVVUG00000003075	SF3A1	100	98.361	Vulpes_vulpes
ENSOPRG00000016636	SF3A1	100	85.445	ENSXETG00000016144	sf3a1	96	86.815	Xenopus_tropicalis
ENSOPRG00000016636	SF3A1	100	83.145	ENSXCOG00000015653	sf3a1	97	85.098	Xiphophorus_couchianus
ENSOPRG00000016636	SF3A1	100	83.270	ENSXMAG00000002753	sf3a1	97	85.229	Xiphophorus_maculatus