EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000000059 (Gene tree)
Gene ID: 101167429
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 15742 bases
Position: chr2:2179380-2195121
Accession: 101167429
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000000068	KH_1	PF00013.29	1.1e-54	1	3
ENSORLP00000000068	KH_1	PF00013.29	1.1e-54	2	3
ENSORLP00000000068	KH_1	PF00013.29	1.1e-54	3	3
ENSORLP00000000068	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000000068	-	933	XM_023963995	ENSORLP00000000068	310 (aa)	XP_023819763	H2L2W5

Gene Model

Click here to download ENSORLG00000000059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000000059	pcbp3	95	41.892	ENSORLG00000027761	-	60	38.806
ENSORLG00000000059	pcbp3	97	80.464	ENSORLG00000005176	PCBP2	95	80.464
ENSORLG00000000059	pcbp3	91	33.784	ENSORLG00000017565	-	67	33.784
ENSORLG00000000059	pcbp3	69	40.580	ENSORLG00000003540	fubp1	57	40.580
ENSORLG00000000059	pcbp3	97	59.021	ENSORLG00000009899	-	72	59.021
ENSORLG00000000059	pcbp3	92	31.387	ENSORLG00000025629	igf2bp1	57	31.387
ENSORLG00000000059	pcbp3	95	35.252	ENSORLG00000016532	igf2bp2b	67	34.066
ENSORLG00000000059	pcbp3	97	60.494	ENSORLG00000003061	pcbp4	65	60.494
ENSORLG00000000059	pcbp3	98	74.194	ENSORLG00000014385	-	71	74.194
ENSORLG00000000059	pcbp3	77	40.299	ENSORLG00000000350	nova1	51	40.299
ENSORLG00000000059	pcbp3	78	55.556	ENSORLG00000004704	hnrpkl	54	55.556
ENSORLG00000000059	pcbp3	100	97.097	ENSORLG00000022739	-	97	97.097
ENSORLG00000000059	pcbp3	97	77.922	ENSORLG00000012872	pcbp2	95	77.922
ENSORLG00000000059	pcbp3	95	35.211	ENSORLG00000004712	igf2bp3	67	30.899
ENSORLG00000000059	pcbp3	80	55.556	ENSORLG00000005161	hnrnpk	58	55.556
ENSORLG00000000059	pcbp3	70	38.462	ENSORLG00000007103	fubp3	55	39.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000059	pcbp3	100	97.419	ENSAPOG00000020003	pcbp3	86	97.419	Acanthochromis_polyacanthus
ENSORLG00000000059	pcbp3	100	97.742	ENSAPOG00000016582	-	95	97.742	Acanthochromis_polyacanthus
ENSORLG00000000059	pcbp3	98	90.683	ENSAMEG00000001697	-	95	86.350	Ailuropoda_melanoleuca
ENSORLG00000000059	pcbp3	100	90.390	ENSACIG00000010933	pcbp3	95	90.390	Amphilophus_citrinellus
ENSORLG00000000059	pcbp3	100	92.744	ENSACIG00000002739	-	97	92.744	Amphilophus_citrinellus
ENSORLG00000000059	pcbp3	100	100.000	ENSAOCG00000008592	-	98	100.000	Amphiprion_ocellaris
ENSORLG00000000059	pcbp3	95	93.262	ENSAOCG00000007806	-	96	93.262	Amphiprion_ocellaris
ENSORLG00000000059	pcbp3	100	95.484	ENSAPEG00000005209	-	97	95.484	Amphiprion_percula
ENSORLG00000000059	pcbp3	100	92.537	ENSAPEG00000008011	pcbp3	95	92.537	Amphiprion_percula
ENSORLG00000000059	pcbp3	100	90.691	ENSATEG00000015787	-	100	90.691	Anabas_testudineus
ENSORLG00000000059	pcbp3	100	95.161	ENSATEG00000009833	-	97	95.161	Anabas_testudineus
ENSORLG00000000059	pcbp3	97	77.143	ENSAPLG00000008951	-	78	77.143	Anas_platyrhynchos
ENSORLG00000000059	pcbp3	98	92.114	ENSAPLG00000002975	-	95	92.114	Anas_platyrhynchos
ENSORLG00000000059	pcbp3	98	83.436	ENSACAG00000009819	-	94	83.436	Anolis_carolinensis
ENSORLG00000000059	pcbp3	98	84.682	ENSACAG00000004607	-	96	84.682	Anolis_carolinensis
ENSORLG00000000059	pcbp3	95	95.595	ENSANAG00000030702	-	95	95.595	Aotus_nancymaae
ENSORLG00000000059	pcbp3	100	97.097	ENSACLG00000003801	-	97	97.097	Astatotilapia_calliptera
ENSORLG00000000059	pcbp3	100	92.239	ENSACLG00000011835	pcbp3	95	92.239	Astatotilapia_calliptera
ENSORLG00000000059	pcbp3	100	90.991	ENSAMXG00000003440	pcbp3	95	90.991	Astyanax_mexicanus
ENSORLG00000000059	pcbp3	100	92.258	ENSAMXG00000013588	-	100	92.258	Astyanax_mexicanus
ENSORLG00000000059	pcbp3	97	67.683	ENSAMXG00000001760	zgc:110045	72	67.683	Astyanax_mexicanus
ENSORLG00000000059	pcbp3	92	96.507	ENSCAFG00020019472	-	81	96.507	Canis_lupus_dingo
ENSORLG00000000059	pcbp3	98	96.370	ENSCSAG00000007440	-	86	96.370	Chlorocebus_sabaeus
ENSORLG00000000059	pcbp3	97	83.077	ENSCPBG00000000733	-	72	83.077	Chrysemys_picta_bellii
ENSORLG00000000059	pcbp3	98	96.700	ENSCPBG00000012151	-	90	96.700	Chrysemys_picta_bellii
ENSORLG00000000059	pcbp3	100	77.976	ENSCSEG00000016984	-	94	81.013	Cynoglossus_semilaevis
ENSORLG00000000059	pcbp3	100	95.484	ENSCSEG00000000822	pcbp3	99	95.484	Cynoglossus_semilaevis
ENSORLG00000000059	pcbp3	100	97.097	ENSCVAG00000005262	-	97	97.097	Cyprinodon_variegatus
ENSORLG00000000059	pcbp3	100	92.239	ENSCVAG00000014482	pcbp3	95	92.239	Cyprinodon_variegatus
ENSORLG00000000059	pcbp3	100	91.291	ENSDARG00000054378	pcbp3	97	91.291	Danio_rerio
ENSORLG00000000059	pcbp3	98	81.848	ENSETEG00000015988	-	95	81.848	Echinops_telfairi
ENSORLG00000000059	pcbp3	97	81.046	ENSEBUG00000007485	-	92	81.735	Eptatretus_burgeri
ENSORLG00000000059	pcbp3	95	74.336	ENSEBUG00000005495	pcbp3	68	74.336	Eptatretus_burgeri
ENSORLG00000000059	pcbp3	95	75.000	ENSEBUG00000016192	pcbp3	99	75.000	Eptatretus_burgeri
ENSORLG00000000059	pcbp3	100	97.419	ENSELUG00000001560	-	86	97.419	Esox_lucius
ENSORLG00000000059	pcbp3	100	91.071	ENSELUG00000003521	pcbp3	95	91.071	Esox_lucius
ENSORLG00000000059	pcbp3	98	96.040	ENSFALG00000003949	-	95	96.040	Ficedula_albicollis
ENSORLG00000000059	pcbp3	97	77.429	ENSFALG00000004411	-	74	77.429	Ficedula_albicollis
ENSORLG00000000059	pcbp3	100	94.839	ENSFHEG00000006539	-	97	94.839	Fundulus_heteroclitus
ENSORLG00000000059	pcbp3	100	97.097	ENSFHEG00000016615	pcbp3	95	97.097	Fundulus_heteroclitus
ENSORLG00000000059	pcbp3	99	81.982	ENSGMOG00000011992	pcbp3	96	82.036	Gadus_morhua
ENSORLG00000000059	pcbp3	99	70.091	ENSGMOG00000008611	-	100	70.091	Gadus_morhua
ENSORLG00000000059	pcbp3	98	82.081	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSORLG00000000059	pcbp3	98	83.436	ENSGALG00000013155	-	98	80.428	Gallus_gallus
ENSORLG00000000059	pcbp3	100	97.097	ENSGAFG00000010274	-	95	97.097	Gambusia_affinis
ENSORLG00000000059	pcbp3	100	88.889	ENSGAFG00000011430	pcbp3	96	88.889	Gambusia_affinis
ENSORLG00000000059	pcbp3	99	90.854	ENSGACG00000002266	-	96	90.854	Gasterosteus_aculeatus
ENSORLG00000000059	pcbp3	100	82.436	ENSGACG00000014955	-	97	82.436	Gasterosteus_aculeatus
ENSORLG00000000059	pcbp3	79	87.368	ENSGAGG00000006956	-	76	87.368	Gopherus_agassizii
ENSORLG00000000059	pcbp3	94	88.390	ENSGAGG00000000271	-	100	88.390	Gopherus_agassizii
ENSORLG00000000059	pcbp3	100	97.097	ENSHBUG00000021782	-	97	97.097	Haplochromis_burtoni
ENSORLG00000000059	pcbp3	100	96.774	ENSHBUG00000010697	pcbp3	98	96.774	Haplochromis_burtoni
ENSORLG00000000059	pcbp3	100	92.515	ENSHCOG00000017868	pcbp3	95	92.515	Hippocampus_comes
ENSORLG00000000059	pcbp3	100	92.258	ENSHCOG00000006067	-	96	92.258	Hippocampus_comes
ENSORLG00000000059	pcbp3	100	94.516	ENSIPUG00000006238	pcbp3	96	94.516	Ictalurus_punctatus
ENSORLG00000000059	pcbp3	100	92.239	ENSKMAG00000003046	pcbp3	95	92.239	Kryptolebias_marmoratus
ENSORLG00000000059	pcbp3	100	96.129	ENSKMAG00000018530	-	95	96.129	Kryptolebias_marmoratus
ENSORLG00000000059	pcbp3	100	80.635	ENSLBEG00000006542	-	96	80.635	Labrus_bergylta
ENSORLG00000000059	pcbp3	100	97.097	ENSLBEG00000006201	pcbp3	95	97.097	Labrus_bergylta
ENSORLG00000000059	pcbp3	97	83.046	ENSLACG00000010386	pcbp3	73	83.046	Latimeria_chalumnae
ENSORLG00000000059	pcbp3	97	77.522	ENSLACG00000010804	zgc:110045	73	77.522	Latimeria_chalumnae
ENSORLG00000000059	pcbp3	98	90.712	ENSLOCG00000009369	pcbp3	95	90.712	Lepisosteus_oculatus
ENSORLG00000000059	pcbp3	97	82.769	ENSLOCG00000005058	zgc:110045	79	82.769	Lepisosteus_oculatus
ENSORLG00000000059	pcbp3	100	97.097	ENSMAMG00000022336	pcbp3	93	97.097	Mastacembelus_armatus
ENSORLG00000000059	pcbp3	100	93.871	ENSMAMG00000011620	-	97	93.871	Mastacembelus_armatus
ENSORLG00000000059	pcbp3	100	90.390	ENSMZEG00005008993	pcbp3	98	89.521	Maylandia_zebra
ENSORLG00000000059	pcbp3	100	86.916	ENSMZEG00005014882	-	95	87.539	Maylandia_zebra
ENSORLG00000000059	pcbp3	98	80.290	ENSMGAG00000001883	-	95	80.580	Meleagris_gallopavo
ENSORLG00000000059	pcbp3	97	77.429	ENSMGAG00000006794	-	74	77.429	Meleagris_gallopavo
ENSORLG00000000059	pcbp3	100	94.516	ENSMMOG00000005216	-	96	94.516	Mola_mola
ENSORLG00000000059	pcbp3	100	96.154	ENSMMOG00000000730	pcbp3	88	96.154	Mola_mola
ENSORLG00000000059	pcbp3	73	76.168	ENSMODG00000027884	-	93	76.168	Monodelphis_domestica
ENSORLG00000000059	pcbp3	99	90.390	ENSMALG00000000691	pcbp3	95	90.390	Monopterus_albus
ENSORLG00000000059	pcbp3	98	83.901	ENSMPUG00000001779	-	87	83.901	Mustela_putorius_furo
ENSORLG00000000059	pcbp3	100	87.539	ENSNBRG00000016714	-	95	87.539	Neolamprologus_brichardi
ENSORLG00000000059	pcbp3	100	90.090	ENSNBRG00000016409	-	95	90.090	Neolamprologus_brichardi
ENSORLG00000000059	pcbp3	97	81.449	ENSOPRG00000003431	-	99	81.449	Ochotona_princeps
ENSORLG00000000059	pcbp3	100	87.252	ENSONIG00000012122	-	98	87.252	Oreochromis_niloticus
ENSORLG00000000059	pcbp3	100	97.097	ENSONIG00000004611	-	97	97.097	Oreochromis_niloticus
ENSORLG00000000059	pcbp3	98	95.710	ENSOCUG00000002696	-	86	95.710	Oryctolagus_cuniculus
ENSORLG00000000059	pcbp3	100	96.774	ENSORLG00020006124	-	97	96.774	Oryzias_latipes_hni
ENSORLG00000000059	pcbp3	100	100.000	ENSORLG00020012671	pcbp3	97	100.000	Oryzias_latipes_hni
ENSORLG00000000059	pcbp3	100	97.097	ENSORLG00015008051	-	95	97.097	Oryzias_latipes_hsok
ENSORLG00000000059	pcbp3	100	100.000	ENSORLG00015000429	pcbp3	97	100.000	Oryzias_latipes_hsok
ENSORLG00000000059	pcbp3	95	98.577	ENSOMEG00000020811	pcbp3	97	98.577	Oryzias_melastigma
ENSORLG00000000059	pcbp3	100	96.774	ENSOMEG00000020162	-	97	96.774	Oryzias_melastigma
ENSORLG00000000059	pcbp3	98	82.808	ENSOGAG00000008044	-	96	82.808	Otolemur_garnettii
ENSORLG00000000059	pcbp3	79	84.211	ENSPKIG00000020913	-	82	84.211	Paramormyrops_kingsleyae
ENSORLG00000000059	pcbp3	100	96.774	ENSPKIG00000019329	pcbp3	97	94.839	Paramormyrops_kingsleyae
ENSORLG00000000059	pcbp3	94	80.328	ENSPSIG00000008350	-	67	80.328	Pelodiscus_sinensis
ENSORLG00000000059	pcbp3	98	82.500	ENSPSIG00000014970	-	95	83.125	Pelodiscus_sinensis
ENSORLG00000000059	pcbp3	99	92.771	ENSPMGG00000022383	pcbp3	95	92.771	Periophthalmus_magnuspinnatus
ENSORLG00000000059	pcbp3	79	89.362	ENSPMAG00000004637	-	97	89.362	Petromyzon_marinus
ENSORLG00000000059	pcbp3	98	74.757	ENSPMAG00000004551	pcbp3	88	74.757	Petromyzon_marinus
ENSORLG00000000059	pcbp3	98	89.571	ENSPCIG00000028092	-	96	91.244	Phascolarctos_cinereus
ENSORLG00000000059	pcbp3	100	83.853	ENSPLAG00000011449	pcbp3	88	83.853	Poecilia_latipinna
ENSORLG00000000059	pcbp3	99	90.909	ENSPLAG00000004074	-	89	90.909	Poecilia_latipinna
ENSORLG00000000059	pcbp3	99	91.964	ENSPMEG00000021239	pcbp3	95	91.964	Poecilia_mexicana
ENSORLG00000000059	pcbp3	100	87.307	ENSPMEG00000006653	-	96	87.915	Poecilia_mexicana
ENSORLG00000000059	pcbp3	100	94.516	ENSPREG00000020585	-	96	95.794	Poecilia_reticulata
ENSORLG00000000059	pcbp3	100	95.192	ENSPREG00000015736	pcbp3	99	95.192	Poecilia_reticulata
ENSORLG00000000059	pcbp3	100	97.097	ENSPNYG00000012326	pcbp3	95	97.097	Pundamilia_nyererei
ENSORLG00000000059	pcbp3	100	94.516	ENSPNYG00000013205	-	96	94.516	Pundamilia_nyererei
ENSORLG00000000059	pcbp3	100	97.742	ENSPNAG00000015104	pcbp3	97	97.742	Pygocentrus_nattereri
ENSORLG00000000059	pcbp3	99	92.857	ENSPNAG00000008541	-	98	92.857	Pygocentrus_nattereri
ENSORLG00000000059	pcbp3	98	96.370	ENSRNOG00000001245	Pcbp3	95	96.370	Rattus_norvegicus
ENSORLG00000000059	pcbp3	98	84.444	ENSRBIG00000028177	-	87	84.444	Rhinopithecus_bieti
ENSORLG00000000059	pcbp3	98	90.093	ENSSHAG00000007890	-	95	90.093	Sarcophilus_harrisii
ENSORLG00000000059	pcbp3	100	97.419	ENSSFOG00015010205	pcbp3	95	97.419	Scleropages_formosus
ENSORLG00000000059	pcbp3	97	84.768	ENSSFOG00015007118	-	93	84.768	Scleropages_formosus
ENSORLG00000000059	pcbp3	100	89.189	ENSSFOG00015014706	pcbp3	95	89.189	Scleropages_formosus
ENSORLG00000000059	pcbp3	100	96.774	ENSSMAG00000003135	-	97	96.774	Scophthalmus_maximus
ENSORLG00000000059	pcbp3	100	97.419	ENSSMAG00000011929	pcbp3	97	97.419	Scophthalmus_maximus
ENSORLG00000000059	pcbp3	100	91.054	ENSSDUG00000008502	-	95	91.054	Seriola_dumerili
ENSORLG00000000059	pcbp3	100	89.851	ENSSDUG00000011608	pcbp3	99	89.851	Seriola_dumerili
ENSORLG00000000059	pcbp3	100	89.851	ENSSLDG00000008518	pcbp3	99	89.851	Seriola_lalandi_dorsalis
ENSORLG00000000059	pcbp3	100	97.742	ENSSLDG00000020161	-	95	97.742	Seriola_lalandi_dorsalis
ENSORLG00000000059	pcbp3	95	81.315	ENSSPUG00000013214	-	90	83.582	Sphenodon_punctatus
ENSORLG00000000059	pcbp3	95	93.262	ENSSPAG00000004190	-	96	93.262	Stegastes_partitus
ENSORLG00000000059	pcbp3	100	79.279	ENSSPAG00000023341	-	95	79.279	Stegastes_partitus
ENSORLG00000000059	pcbp3	98	87.307	ENSTGUG00000003316	-	95	87.307	Taeniopygia_guttata
ENSORLG00000000059	pcbp3	98	89.769	ENSTGUG00000008158	-	95	89.769	Taeniopygia_guttata
ENSORLG00000000059	pcbp3	100	93.498	ENSTRUG00000013604	pcbp3	95	93.498	Takifugu_rubripes
ENSORLG00000000059	pcbp3	95	97.473	ENSTRUG00000006280	-	88	97.473	Takifugu_rubripes
ENSORLG00000000059	pcbp3	98	83.237	ENSTTRG00000015075	-	96	83.237	Tursiops_truncatus
ENSORLG00000000059	pcbp3	98	89.474	ENSXETG00000011483	pcbp1	95	89.474	Xenopus_tropicalis
ENSORLG00000000059	pcbp3	93	76.190	ENSXETG00000010491	pcbp2	74	76.190	Xenopus_tropicalis
ENSORLG00000000059	pcbp3	99	91.964	ENSXCOG00000020481	pcbp3	95	91.964	Xiphophorus_couchianus
ENSORLG00000000059	pcbp3	100	97.419	ENSXMAG00000028711	-	95	97.419	Xiphophorus_maculatus
ENSORLG00000000059	pcbp3	100	92.537	ENSXMAG00000008175	pcbp3	95	92.537	Xiphophorus_maculatus