EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000000138 (Gene tree)
Gene ID: 101159495
Gene Symbol: cherp
Alias: -
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 31774 bases
Position: chr4:1437110-1468883
Accession: 101159495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043202	Surp	PF01805.20	1.3e-15	1	1
ENSORLP00000000174	Surp	PF01805.20	1.3e-15	1	1
ENSORLP00000036837	Surp	PF01805.20	1.4e-15	1	1
ENSORLP00000000174	G-patch	PF01585.23	1.8e-10	1	1
ENSORLP00000036837	G-patch	PF01585.23	1.9e-10	1	1
ENSORLP00000043202	G-patch	PF01585.23	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000000174	-	5197	XM_023953924	ENSORLP00000000174	899 (aa)	XP_023809692	H2L364
ENSORLT00000039476	-	5146	-	ENSORLP00000043202	882 (aa)	-	-
ENSORLT00000040079	-	5236	XM_023953923	ENSORLP00000036837	912 (aa)	XP_023809691	UPI0009DB5F50

Gene Model

Click here to download ENSORLG00000000138's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000138	cherp	79	67.154	ENSG00000085872	CHERP	80	66.360	Homo_sapiens
ENSORLG00000000138	cherp	61	85.636	ENSAPOG00000009646	cherp	97	82.909	Acanthochromis_polyacanthus
ENSORLG00000000138	cherp	98	65.506	ENSAMEG00000010048	CHERP	80	66.355	Ailuropoda_melanoleuca
ENSORLG00000000138	cherp	100	81.522	ENSACIG00000019242	cherp	80	84.469	Amphilophus_citrinellus
ENSORLG00000000138	cherp	100	82.948	ENSAOCG00000017846	cherp	99	83.554	Amphiprion_ocellaris
ENSORLG00000000138	cherp	100	84.031	ENSAPEG00000021128	cherp	99	84.641	Amphiprion_percula
ENSORLG00000000138	cherp	99	84.251	ENSATEG00000006341	cherp	99	84.581	Anabas_testudineus
ENSORLG00000000138	cherp	76	65.881	ENSAPLG00000010773	CHERP	78	64.681	Anas_platyrhynchos
ENSORLG00000000138	cherp	79	65.924	ENSANAG00000024284	CHERP	80	66.192	Aotus_nancymaae
ENSORLG00000000138	cherp	100	83.956	ENSACLG00000020053	cherp	99	85.226	Astatotilapia_calliptera
ENSORLG00000000138	cherp	100	70.181	ENSAMXG00000021637	cherp	94	69.584	Astyanax_mexicanus
ENSORLG00000000138	cherp	99	65.558	ENSBTAG00000005289	CHERP	82	66.229	Bos_taurus
ENSORLG00000000138	cherp	79	65.793	ENSCJAG00000040462	CHERP	86	61.735	Callithrix_jacchus
ENSORLG00000000138	cherp	79	66.667	ENSCAFG00000015671	CHERP	80	66.097	Canis_familiaris
ENSORLG00000000138	cherp	87	85.000	ENSCAFG00020009941	CHERP	96	80.682	Canis_lupus_dingo
ENSORLG00000000138	cherp	99	62.540	ENSCHIG00000013765	CHERP	95	80.000	Capra_hircus
ENSORLG00000000138	cherp	88	61.456	ENSCAPG00000000910	CHERP	72	62.275	Cavia_aperea
ENSORLG00000000138	cherp	99	63.472	ENSCPOG00000019949	CHERP	79	65.229	Cavia_porcellus
ENSORLG00000000138	cherp	79	65.924	ENSCCAG00000031534	CHERP	80	66.192	Cebus_capucinus
ENSORLG00000000138	cherp	79	65.966	ENSCATG00000031409	CHERP	80	66.235	Cercocebus_atys
ENSORLG00000000138	cherp	68	65.596	ENSCLAG00000005484	CHERP	78	61.844	Chinchilla_lanigera
ENSORLG00000000138	cherp	79	67.156	ENSCSAG00000005740	CHERP	80	66.491	Chlorocebus_sabaeus
ENSORLG00000000138	cherp	100	64.925	ENSCPBG00000014970	CHERP	80	65.775	Chrysemys_picta_bellii
ENSORLG00000000138	cherp	73	48.368	ENSCING00000004814	-	55	70.588	Ciona_intestinalis
ENSORLG00000000138	cherp	79	67.290	ENSCANG00000032053	CHERP	80	66.491	Colobus_angolensis_palliatus
ENSORLG00000000138	cherp	79	65.144	ENSCGRG00001023316	Cherp	99	64.121	Cricetulus_griseus_chok1gshd
ENSORLG00000000138	cherp	79	65.918	ENSCGRG00000015901	Cherp	99	64.286	Cricetulus_griseus_crigri
ENSORLG00000000138	cherp	79	82.033	ENSCSEG00000019700	cherp	100	82.220	Cynoglossus_semilaevis
ENSORLG00000000138	cherp	83	76.975	ENSCVAG00000003622	cherp	97	77.793	Cyprinodon_variegatus
ENSORLG00000000138	cherp	100	71.522	ENSDARG00000021812	cherp	100	81.439	Danio_rerio
ENSORLG00000000138	cherp	98	64.764	ENSDORG00000027623	Cherp	80	66.000	Dipodomys_ordii
ENSORLG00000000138	cherp	65	64.062	FBgn0261872	scaf6	51	54.255	Drosophila_melanogaster
ENSORLG00000000138	cherp	80	72.532	ENSETEG00000019543	CHERP	80	73.778	Echinops_telfairi
ENSORLG00000000138	cherp	79	66.399	ENSEASG00005000428	CHERP	74	65.495	Equus_asinus_asinus
ENSORLG00000000138	cherp	79	66.801	ENSECAG00000012713	CHERP	80	65.490	Equus_caballus
ENSORLG00000000138	cherp	99	71.934	ENSELUG00000023026	cherp	99	70.983	Esox_lucius
ENSORLG00000000138	cherp	79	65.526	ENSFCAG00000013172	CHERP	81	65.762	Felis_catus
ENSORLG00000000138	cherp	79	66.980	ENSFALG00000013410	CHERP	69	65.863	Ficedula_albicollis
ENSORLG00000000138	cherp	84	90.000	ENSFDAG00000015981	CHERP	81	60.372	Fukomys_damarensis
ENSORLG00000000138	cherp	88	88.764	ENSFHEG00000009720	cherp	77	94.737	Fundulus_heteroclitus
ENSORLG00000000138	cherp	79	78.562	ENSGMOG00000008654	cherp	79	78.947	Gadus_morhua
ENSORLG00000000138	cherp	79	66.712	ENSGALG00000003824	CHERP	70	65.726	Gallus_gallus
ENSORLG00000000138	cherp	99	79.740	ENSGACG00000002053	cherp	99	79.307	Gasterosteus_aculeatus
ENSORLG00000000138	cherp	100	64.606	ENSGAGG00000014208	CHERP	80	65.508	Gopherus_agassizii
ENSORLG00000000138	cherp	53	60.618	ENSGGOG00000016348	CHERP	72	53.495	Gorilla_gorilla
ENSORLG00000000138	cherp	100	84.066	ENSHBUG00000007405	cherp	100	84.286	Haplochromis_burtoni
ENSORLG00000000138	cherp	79	66.444	ENSHGLG00000002993	CHERP	79	66.402	Heterocephalus_glaber_female
ENSORLG00000000138	cherp	50	71.302	ENSHGLG00100010390	CHERP	70	60.682	Heterocephalus_glaber_male
ENSORLG00000000138	cherp	79	80.807	ENSHCOG00000007691	cherp	100	79.421	Hippocampus_comes
ENSORLG00000000138	cherp	100	70.563	ENSIPUG00000025008	cherp	100	68.817	Ictalurus_punctatus
ENSORLG00000000138	cherp	98	64.488	ENSSTOG00000012089	CHERP	80	66.756	Ictidomys_tridecemlineatus
ENSORLG00000000138	cherp	79	66.579	ENSJJAG00000017982	Cherp	81	65.963	Jaculus_jaculus
ENSORLG00000000138	cherp	79	84.594	ENSKMAG00000009101	cherp	100	83.388	Kryptolebias_marmoratus
ENSORLG00000000138	cherp	78	83.075	ENSLBEG00000007586	cherp	91	83.263	Labrus_bergylta
ENSORLG00000000138	cherp	79	65.930	ENSLACG00000018221	CHERP	80	63.860	Latimeria_chalumnae
ENSORLG00000000138	cherp	79	73.748	ENSLOCG00000003654	cherp	79	73.289	Lepisosteus_oculatus
ENSORLG00000000138	cherp	79	66.576	ENSLAFG00000009096	CHERP	80	65.775	Loxodonta_africana
ENSORLG00000000138	cherp	79	66.053	ENSMFAG00000033267	CHERP	80	66.321	Macaca_fascicularis
ENSORLG00000000138	cherp	99	63.404	ENSMMUG00000012958	CHERP	82	66.321	Macaca_mulatta
ENSORLG00000000138	cherp	79	66.053	ENSMNEG00000004125	CHERP	80	66.321	Macaca_nemestrina
ENSORLG00000000138	cherp	69	82.781	ENSMLEG00000044337	CHERP	75	86.029	Mandrillus_leucophaeus
ENSORLG00000000138	cherp	100	82.159	ENSMAMG00000022269	cherp	99	84.199	Mastacembelus_armatus
ENSORLG00000000138	cherp	100	83.956	ENSMZEG00005018014	cherp	99	85.226	Maylandia_zebra
ENSORLG00000000138	cherp	68	69.572	ENSMGAG00000005571	CHERP	71	66.930	Meleagris_gallopavo
ENSORLG00000000138	cherp	79	64.744	ENSMAUG00000015856	Cherp	99	63.941	Mesocricetus_auratus
ENSORLG00000000138	cherp	100	64.574	ENSMICG00000004577	CHERP	80	66.180	Microcebus_murinus
ENSORLG00000000138	cherp	79	66.356	ENSMOCG00000014697	Cherp	99	64.437	Microtus_ochrogaster
ENSORLG00000000138	cherp	99	83.111	ENSMMOG00000008525	cherp	97	82.943	Mola_mola
ENSORLG00000000138	cherp	100	82.524	ENSMALG00000020688	cherp	100	82.848	Monopterus_albus
ENSORLG00000000138	cherp	79	65.086	MGP_CAROLIEiJ_G0031220	Cherp	99	63.541	Mus_caroli
ENSORLG00000000138	cherp	79	65.559	MGP_PahariEiJ_G0021685	Cherp	99	63.646	Mus_pahari
ENSORLG00000000138	cherp	79	65.390	MGP_SPRETEiJ_G0032341	Cherp	99	63.675	Mus_spretus
ENSORLG00000000138	cherp	79	66.711	ENSMPUG00000016023	CHERP	78	66.010	Mustela_putorius_furo
ENSORLG00000000138	cherp	79	61.702	ENSMLUG00000013881	CHERP	80	61.518	Myotis_lucifugus
ENSORLG00000000138	cherp	100	80.807	ENSNBRG00000001914	cherp	82	83.037	Neolamprologus_brichardi
ENSORLG00000000138	cherp	79	66.756	ENSNLEG00000005536	CHERP	80	66.229	Nomascus_leucogenys
ENSORLG00000000138	cherp	68	77.627	ENSMEUG00000010840	CHERP	71	77.551	Notamacropus_eugenii
ENSORLG00000000138	cherp	98	65.649	ENSODEG00000001528	CHERP	81	65.909	Octodon_degus
ENSORLG00000000138	cherp	100	83.099	ENSONIG00000007686	cherp	99	84.457	Oreochromis_niloticus
ENSORLG00000000138	cherp	100	99.671	ENSORLG00020013142	cherp	100	99.671	Oryzias_latipes_hni
ENSORLG00000000138	cherp	100	99.232	ENSORLG00015008911	cherp	100	99.232	Oryzias_latipes_hsok
ENSORLG00000000138	cherp	100	96.663	ENSOMEG00000016947	cherp	100	96.663	Oryzias_melastigma
ENSORLG00000000138	cherp	79	65.821	ENSOGAG00000005834	CHERP	79	65.177	Otolemur_garnettii
ENSORLG00000000138	cherp	79	59.219	ENSOARG00000018876	CHERP	79	59.495	Ovis_aries
ENSORLG00000000138	cherp	79	65.838	ENSPPAG00000029195	CHERP	80	66.106	Pan_paniscus
ENSORLG00000000138	cherp	79	65.526	ENSPPRG00000003275	CHERP	81	65.762	Panthera_pardus
ENSORLG00000000138	cherp	98	54.485	ENSPTIG00000019778	CHERP	99	54.213	Panthera_tigris_altaica
ENSORLG00000000138	cherp	79	67.065	ENSPTRG00000010647	CHERP	80	66.273	Pan_troglodytes
ENSORLG00000000138	cherp	79	66.053	ENSPANG00000011698	CHERP	80	66.321	Papio_anubis
ENSORLG00000000138	cherp	78	66.621	ENSPKIG00000000423	cherp	80	67.799	Paramormyrops_kingsleyae
ENSORLG00000000138	cherp	98	65.584	ENSPSIG00000011974	CHERP	79	66.088	Pelodiscus_sinensis
ENSORLG00000000138	cherp	87	94.937	ENSPMGG00000023606	cherp	88	94.937	Periophthalmus_magnuspinnatus
ENSORLG00000000138	cherp	79	64.545	ENSPEMG00000011238	Cherp	99	63.950	Peromyscus_maniculatus_bairdii
ENSORLG00000000138	cherp	79	66.580	ENSPCIG00000019615	CHERP	77	65.584	Phascolarctos_cinereus
ENSORLG00000000138	cherp	99	81.432	ENSPFOG00000016899	cherp	99	83.055	Poecilia_formosa
ENSORLG00000000138	cherp	85	81.274	ENSPMEG00000002214	cherp	99	81.201	Poecilia_mexicana
ENSORLG00000000138	cherp	99	81.250	ENSPREG00000020774	cherp	99	83.147	Poecilia_reticulata
ENSORLG00000000138	cherp	79	65.374	ENSPPYG00000009691	CHERP	79	64.581	Pongo_abelii
ENSORLG00000000138	cherp	89	77.895	ENSPCAG00000001337	CHERP	90	78.889	Procavia_capensis
ENSORLG00000000138	cherp	68	91.045	ENSPCOG00000022788	CHERP	70	91.045	Propithecus_coquereli
ENSORLG00000000138	cherp	89	77.895	ENSPVAG00000004320	CHERP	90	78.889	Pteropus_vampyrus
ENSORLG00000000138	cherp	100	83.846	ENSPNYG00000003942	cherp	99	85.226	Pundamilia_nyererei
ENSORLG00000000138	cherp	100	69.607	ENSPNAG00000017179	cherp	100	69.182	Pygocentrus_nattereri
ENSORLG00000000138	cherp	79	65.086	ENSRNOG00000012323	Cherp	99	63.751	Rattus_norvegicus
ENSORLG00000000138	cherp	79	66.889	ENSRBIG00000038621	CHERP	84	66.192	Rhinopithecus_bieti
ENSORLG00000000138	cherp	79	66.053	ENSRROG00000040770	CHERP	84	66.321	Rhinopithecus_roxellana
ENSORLG00000000138	cherp	79	65.838	ENSSBOG00000014492	CHERP	85	61.862	Saimiri_boliviensis_boliviensis
ENSORLG00000000138	cherp	64	81.013	ENSSFOG00015008022	cherp	93	75.000	Scleropages_formosus
ENSORLG00000000138	cherp	100	81.290	ENSSMAG00000005362	cherp	100	82.043	Scophthalmus_maximus
ENSORLG00000000138	cherp	100	82.454	ENSSDUG00000019712	cherp	100	83.854	Seriola_dumerili
ENSORLG00000000138	cherp	100	83.170	ENSSLDG00000012659	cherp	100	84.154	Seriola_lalandi_dorsalis
ENSORLG00000000138	cherp	79	69.402	ENSSPUG00000008901	CHERP	79	68.370	Sphenodon_punctatus
ENSORLG00000000138	cherp	100	84.193	ENSSPAG00000010681	cherp	99	85.463	Stegastes_partitus
ENSORLG00000000138	cherp	79	67.068	ENSSSCG00000013860	CHERP	80	66.491	Sus_scrofa
ENSORLG00000000138	cherp	79	66.622	ENSTGUG00000000680	CHERP	80	65.194	Taeniopygia_guttata
ENSORLG00000000138	cherp	99	80.509	ENSTRUG00000007429	cherp	99	80.324	Takifugu_rubripes
ENSORLG00000000138	cherp	99	79.171	ENSTNIG00000003363	cherp	80	83.056	Tetraodon_nigroviridis
ENSORLG00000000138	cherp	62	90.909	ENSTTRG00000015006	CHERP	70	68.217	Tursiops_truncatus
ENSORLG00000000138	cherp	99	62.500	ENSUAMG00000017295	CHERP	80	64.499	Ursus_americanus
ENSORLG00000000138	cherp	68	68.317	ENSUMAG00000000965	CHERP	94	78.022	Ursus_maritimus
ENSORLG00000000138	cherp	79	65.223	ENSVVUG00000016546	CHERP	81	65.633	Vulpes_vulpes