EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000000292 (Gene tree)
Gene ID: 101168533
Gene Symbol: srsf3b
Alias: -
Full Name: serine/arginine-rich splicing factor 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 5670 bases
Position: chr5:2320344-2326013
Accession: 101168533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000030760	RRM_1	PF00076.22	7.3e-18	1	1
ENSORLP00000000358	RRM_1	PF00076.22	7.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039052	-	2416	XM_004068461	ENSORLP00000030760	232 (aa)	XP_004068509	UPI0005CC6F65
ENSORLT00000000358	-	1308	-	ENSORLP00000000358	217 (aa)	-	H2L3N2

Gene Model

Click here to download ENSORLG00000000292's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG
ola05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000292	srsf3b	58	84.252	ENSG00000112081	SRSF3	100	92.216	Homo_sapiens
ENSORLG00000000292	srsf3b	72	97.590	ENSAPOG00000017845	srsf3b	100	97.590	Acanthochromis_polyacanthus
ENSORLG00000000292	srsf3b	65	75.333	ENSAPOG00000018179	-	94	79.605	Acanthochromis_polyacanthus
ENSORLG00000000292	srsf3b	63	77.397	ENSACIG00000016419	-	68	91.429	Amphilophus_citrinellus
ENSORLG00000000292	srsf3b	72	97.590	ENSAOCG00000022173	srsf3b	100	97.590	Amphiprion_ocellaris
ENSORLG00000000292	srsf3b	59	75.000	ENSAPEG00000013125	-	84	89.815	Amphiprion_percula
ENSORLG00000000292	srsf3b	72	97.590	ENSAPEG00000014876	srsf3b	100	97.590	Amphiprion_percula
ENSORLG00000000292	srsf3b	72	96.988	ENSATEG00000006193	srsf3b	100	96.988	Anabas_testudineus
ENSORLG00000000292	srsf3b	58	84.252	ENSANAG00000033233	-	100	92.216	Aotus_nancymaae
ENSORLG00000000292	srsf3b	65	73.759	ENSAMXG00000033364	srsf3a	99	86.391	Astyanax_mexicanus
ENSORLG00000000292	srsf3b	58	84.252	ENSCJAG00000016062	-	100	92.216	Callithrix_jacchus
ENSORLG00000000292	srsf3b	58	84.252	ENSCHIG00000009659	-	84	93.396	Capra_hircus
ENSORLG00000000292	srsf3b	58	65.079	ENSCHIG00000019854	-	93	74.257	Capra_hircus
ENSORLG00000000292	srsf3b	58	84.252	ENSTSYG00000025880	SRSF3	100	92.216	Carlito_syrichta
ENSORLG00000000292	srsf3b	58	84.252	ENSCCAG00000032244	SRSF3	100	92.216	Cebus_capucinus
ENSORLG00000000292	srsf3b	58	84.252	ENSCATG00000031850	SRSF3	100	92.216	Cercocebus_atys
ENSORLG00000000292	srsf3b	72	65.680	ENSCHOG00000002515	SRSF3	100	65.680	Choloepus_hoffmanni
ENSORLG00000000292	srsf3b	58	84.252	ENSCANG00000039617	SRSF3	100	92.216	Colobus_angolensis_palliatus
ENSORLG00000000292	srsf3b	66	75.163	ENSCGRG00001022756	-	87	73.427	Cricetulus_griseus_chok1gshd
ENSORLG00000000292	srsf3b	72	70.659	ENSCGRG00000017956	-	100	68.862	Cricetulus_griseus_crigri
ENSORLG00000000292	srsf3b	66	75.163	ENSCGRG00000017619	-	87	73.427	Cricetulus_griseus_crigri
ENSORLG00000000292	srsf3b	74	64.327	ENSCSEG00000001311	-	83	89.423	Cynoglossus_semilaevis
ENSORLG00000000292	srsf3b	72	96.386	ENSCSEG00000002271	srsf3b	97	96.386	Cynoglossus_semilaevis
ENSORLG00000000292	srsf3b	58	92.063	ENSCVAG00000003851	srsf3b	90	93.960	Cyprinodon_variegatus
ENSORLG00000000292	srsf3b	63	76.027	ENSCVAG00000009865	-	68	93.333	Cyprinodon_variegatus
ENSORLG00000000292	srsf3b	59	81.955	ENSDARG00000025397	srsf3a	99	83.721	Danio_rerio
ENSORLG00000000292	srsf3b	59	81.955	ENSDARG00000100815	srsf3a	99	83.721	Danio_rerio
ENSORLG00000000292	srsf3b	58	86.508	ENSDARG00000059360	srsf3b	100	93.976	Danio_rerio
ENSORLG00000000292	srsf3b	72	86.826	ENSDNOG00000000421	SRSF3	100	91.018	Dasypus_novemcinctus
ENSORLG00000000292	srsf3b	69	43.500	FBgn0028554	x16	55	49.645	Drosophila_melanogaster
ENSORLG00000000292	srsf3b	66	66.250	ENSEBUG00000002677	-	74	67.257	Eptatretus_burgeri
ENSORLG00000000292	srsf3b	72	65.089	ENSEEUG00000001119	SRSF3	100	65.089	Erinaceus_europaeus
ENSORLG00000000292	srsf3b	50	92.793	ENSELUG00000002390	srsf3a	86	87.919	Esox_lucius
ENSORLG00000000292	srsf3b	66	88.312	ENSELUG00000014357	SRSF3	99	87.647	Esox_lucius
ENSORLG00000000292	srsf3b	65	82.895	ENSFCAG00000022629	-	71	88.158	Felis_catus
ENSORLG00000000292	srsf3b	58	90.476	ENSFHEG00000005368	srsf3b	90	93.960	Fundulus_heteroclitus
ENSORLG00000000292	srsf3b	59	83.465	ENSFHEG00000014610	-	83	92.308	Fundulus_heteroclitus
ENSORLG00000000292	srsf3b	51	64.706	ENSFHEG00000007159	srsf7a	58	70.526	Fundulus_heteroclitus
ENSORLG00000000292	srsf3b	68	77.070	ENSGMOG00000008043	SRSF3	94	76.510	Gadus_morhua
ENSORLG00000000292	srsf3b	67	71.795	ENSGAFG00000010130	-	84	90.741	Gambusia_affinis
ENSORLG00000000292	srsf3b	51	95.455	ENSGAFG00000021603	srsf3b	90	95.455	Gambusia_affinis
ENSORLG00000000292	srsf3b	58	84.252	ENSGGOG00000017186	SRSF3	100	92.216	Gorilla_gorilla
ENSORLG00000000292	srsf3b	66	81.579	ENSGGOG00000041151	-	100	74.342	Gorilla_gorilla
ENSORLG00000000292	srsf3b	68	96.815	ENSHBUG00000003073	srsf3b	91	96.815	Haplochromis_burtoni
ENSORLG00000000292	srsf3b	72	71.257	ENSHGLG00000015682	-	97	72.222	Heterocephalus_glaber_female
ENSORLG00000000292	srsf3b	67	85.714	ENSHCOG00000000149	srsf3b	89	93.919	Hippocampus_comes
ENSORLG00000000292	srsf3b	63	69.178	ENSHCOG00000017795	-	62	84.615	Hippocampus_comes
ENSORLG00000000292	srsf3b	72	72.619	ENSSTOG00000032014	-	92	68.421	Ictidomys_tridecemlineatus
ENSORLG00000000292	srsf3b	79	73.714	ENSKMAG00000021401	srsf3b	81	80.476	Kryptolebias_marmoratus
ENSORLG00000000292	srsf3b	58	91.270	ENSLBEG00000013364	srsf3b	100	94.012	Labrus_bergylta
ENSORLG00000000292	srsf3b	64	79.195	ENSLBEG00000000877	-	83	88.462	Labrus_bergylta
ENSORLG00000000292	srsf3b	58	84.252	ENSMFAG00000002707	SRSF3	100	92.216	Macaca_fascicularis
ENSORLG00000000292	srsf3b	58	84.252	ENSMMUG00000014306	SRSF3	100	92.216	Macaca_mulatta
ENSORLG00000000292	srsf3b	58	84.252	ENSMNEG00000038420	SRSF3	100	92.216	Macaca_nemestrina
ENSORLG00000000292	srsf3b	72	97.590	ENSMAMG00000023915	srsf3b	100	97.590	Mastacembelus_armatus
ENSORLG00000000292	srsf3b	72	69.461	ENSMAUG00000011430	-	88	69.799	Mesocricetus_auratus
ENSORLG00000000292	srsf3b	58	84.252	ENSMICG00000029154	-	100	92.216	Microcebus_murinus
ENSORLG00000000292	srsf3b	60	74.809	ENSMICG00000004674	-	78	85.294	Microcebus_murinus
ENSORLG00000000292	srsf3b	52	84.956	ENSMOCG00000014206	-	100	73.256	Microtus_ochrogaster
ENSORLG00000000292	srsf3b	58	84.252	ENSMUSG00000071172	Srsf3	100	92.216	Mus_musculus
ENSORLG00000000292	srsf3b	58	84.252	ENSNLEG00000010737	SRSF3	100	92.216	Nomascus_leucogenys
ENSORLG00000000292	srsf3b	67	84.615	ENSNLEG00000030606	-	96	84.615	Nomascus_leucogenys
ENSORLG00000000292	srsf3b	100	99.569	ENSORLG00020008172	srsf3b	100	99.569	Oryzias_latipes_hni
ENSORLG00000000292	srsf3b	57	79.032	ENSORLG00020011157	-	81	91.346	Oryzias_latipes_hni
ENSORLG00000000292	srsf3b	72	100.000	ENSORLG00015004309	srsf3b	100	100.000	Oryzias_latipes_hsok
ENSORLG00000000292	srsf3b	72	99.398	ENSOMEG00000014893	srsf3b	100	100.000	Oryzias_melastigma
ENSORLG00000000292	srsf3b	58	84.252	ENSPPAG00000037453	SRSF3	100	92.216	Pan_paniscus
ENSORLG00000000292	srsf3b	66	85.526	ENSPTRG00000041876	-	100	84.868	Pan_troglodytes
ENSORLG00000000292	srsf3b	58	84.252	ENSPTRG00000018106	SRSF3	100	92.216	Pan_troglodytes
ENSORLG00000000292	srsf3b	58	84.252	ENSPANG00000018768	-	100	92.216	Papio_anubis
ENSORLG00000000292	srsf3b	64	72.297	ENSPMGG00000010209	-	68	88.889	Periophthalmus_magnuspinnatus
ENSORLG00000000292	srsf3b	58	93.651	ENSPMGG00000004040	srsf3b	100	84.940	Periophthalmus_magnuspinnatus
ENSORLG00000000292	srsf3b	58	91.270	ENSPFOG00000000552	srsf3b	84	96.190	Poecilia_formosa
ENSORLG00000000292	srsf3b	58	91.270	ENSPLAG00000003715	srsf3b	90	94.631	Poecilia_latipinna
ENSORLG00000000292	srsf3b	58	91.270	ENSPMEG00000001983	srsf3b	90	94.631	Poecilia_mexicana
ENSORLG00000000292	srsf3b	58	90.476	ENSPREG00000004340	srsf3b	84	96.190	Poecilia_reticulata
ENSORLG00000000292	srsf3b	58	84.252	ENSPPYG00000016548	-	84	93.396	Pongo_abelii
ENSORLG00000000292	srsf3b	58	84.252	ENSPCOG00000026280	SRSF3	100	92.216	Propithecus_coquereli
ENSORLG00000000292	srsf3b	56	95.420	ENSPNYG00000007657	srsf3b	96	95.420	Pundamilia_nyererei
ENSORLG00000000292	srsf3b	72	83.333	ENSPNAG00000012262	srsf3a	98	88.095	Pygocentrus_nattereri
ENSORLG00000000292	srsf3b	58	84.252	ENSRNOG00000000520	Srsf3	100	92.216	Rattus_norvegicus
ENSORLG00000000292	srsf3b	58	84.252	ENSRBIG00000036836	SRSF3	100	92.216	Rhinopithecus_bieti
ENSORLG00000000292	srsf3b	58	84.252	ENSRROG00000044486	SRSF3	100	92.216	Rhinopithecus_roxellana
ENSORLG00000000292	srsf3b	58	84.252	ENSSBOG00000022192	SRSF3	100	92.216	Saimiri_boliviensis_boliviensis
ENSORLG00000000292	srsf3b	67	92.308	ENSSFOG00015022844	-	100	92.169	Scleropages_formosus
ENSORLG00000000292	srsf3b	74	95.322	ENSSMAG00000000387	srsf3b	98	95.322	Scophthalmus_maximus
ENSORLG00000000292	srsf3b	72	97.590	ENSSDUG00000009243	srsf3b	100	97.590	Seriola_dumerili
ENSORLG00000000292	srsf3b	72	97.590	ENSSLDG00000022631	srsf3b	100	97.590	Seriola_lalandi_dorsalis
ENSORLG00000000292	srsf3b	63	76.351	ENSTRUG00000023965	-	82	93.333	Takifugu_rubripes
ENSORLG00000000292	srsf3b	72	88.535	ENSTRUG00000024882	srsf3b	100	87.421	Takifugu_rubripes
ENSORLG00000000292	srsf3b	61	45.522	ENSUAMG00000011426	-	72	65.714	Ursus_americanus
ENSORLG00000000292	srsf3b	59	46.923	ENSUMAG00000023107	-	72	65.714	Ursus_maritimus
ENSORLG00000000292	srsf3b	59	44.218	ENSVVUG00000006092	-	77	56.790	Vulpes_vulpes
ENSORLG00000000292	srsf3b	58	90.476	ENSXMAG00000001097	srsf3b	90	93.960	Xiphophorus_maculatus