EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000000343 (Gene tree)
Gene ID: 101171671
Gene Symbol: secisbp2
Alias: -
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 12195 bases
Position: chr9:1824698-1836892
Accession: 101171671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000000416	Ribosomal_L7Ae	PF01248.26	6e-21	1	1
ENSORLP00000030645	Ribosomal_L7Ae	PF01248.26	6.2e-21	1	1
ENSORLP00000027801	Ribosomal_L7Ae	PF01248.26	7.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040108	-	3765	XM_011478753	ENSORLP00000030645	663 (aa)	XP_011477055	-
ENSORLT00000000416	-	3695	-	ENSORLP00000000416	646 (aa)	-	H2L3T6
ENSORLT00000039444	-	3981	XM_011478749	ENSORLP00000027801	735 (aa)	XP_011477051	UPI0005CBB063

Gene Model

Click here to download ENSORLG00000000343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000343	secisbp2	55	47.684	ENSG00000138593	SECISBP2L	57	47.684	Homo_sapiens
ENSORLG00000000343	secisbp2	72	48.847	ENSG00000187742	SECISBP2	57	49.372	Homo_sapiens
ENSORLG00000000343	secisbp2	99	60.876	ENSAPOG00000005939	secisbp2	93	60.805	Acanthochromis_polyacanthus
ENSORLG00000000343	secisbp2	69	50.759	ENSAMEG00000003349	SECISBP2	50	50.759	Ailuropoda_melanoleuca
ENSORLG00000000343	secisbp2	67	62.924	ENSACIG00000024185	secisbp2	83	62.924	Amphilophus_citrinellus
ENSORLG00000000343	secisbp2	99	60.367	ENSAOCG00000019052	secisbp2	91	60.468	Amphiprion_ocellaris
ENSORLG00000000343	secisbp2	99	60.085	ENSAPEG00000012971	secisbp2	91	60.193	Amphiprion_percula
ENSORLG00000000343	secisbp2	99	60.850	ENSATEG00000001095	secisbp2	93	58.356	Anabas_testudineus
ENSORLG00000000343	secisbp2	80	46.209	ENSAPLG00000013053	SECISBP2	60	45.668	Anas_platyrhynchos
ENSORLG00000000343	secisbp2	87	43.478	ENSACAG00000016594	SECISBP2	74	44.288	Anolis_carolinensis
ENSORLG00000000343	secisbp2	70	49.892	ENSANAG00000028208	SECISBP2	52	49.686	Aotus_nancymaae
ENSORLG00000000343	secisbp2	97	56.745	ENSACLG00000019976	secisbp2	94	54.521	Astatotilapia_calliptera
ENSORLG00000000343	secisbp2	96	49.213	ENSAMXG00000015953	secisbp2	87	50.287	Astyanax_mexicanus
ENSORLG00000000343	secisbp2	69	51.198	ENSBTAG00000001939	SECISBP2	53	54.726	Bos_taurus
ENSORLG00000000343	secisbp2	69	50.109	ENSCJAG00000007806	SECISBP2	50	50.542	Callithrix_jacchus
ENSORLG00000000343	secisbp2	69	50.743	ENSCAFG00000002188	SECISBP2	50	50.743	Canis_familiaris
ENSORLG00000000343	secisbp2	69	50.749	ENSCAFG00020007224	SECISBP2	50	50.743	Canis_lupus_dingo
ENSORLG00000000343	secisbp2	69	49.119	ENSTSYG00000014119	SECISBP2	54	50.219	Carlito_syrichta
ENSORLG00000000343	secisbp2	54	54.571	ENSCAPG00000008522	SECISBP2	51	54.571	Cavia_aperea
ENSORLG00000000343	secisbp2	70	51.087	ENSCPOG00000014270	SECISBP2	50	51.087	Cavia_porcellus
ENSORLG00000000343	secisbp2	69	49.781	ENSCCAG00000013350	SECISBP2	50	49.891	Cebus_capucinus
ENSORLG00000000343	secisbp2	69	49.673	ENSCATG00000008304	SECISBP2	50	50.108	Cercocebus_atys
ENSORLG00000000343	secisbp2	69	49.342	ENSCSAG00000007310	SECISBP2	50	49.782	Chlorocebus_sabaeus
ENSORLG00000000343	secisbp2	66	52.644	ENSCPBG00000005608	SECISBP2	83	53.986	Chrysemys_picta_bellii
ENSORLG00000000343	secisbp2	69	49.567	ENSCANG00000034551	SECISBP2	54	50.000	Colobus_angolensis_palliatus
ENSORLG00000000343	secisbp2	69	49.451	ENSCGRG00001013930	Secisbp2	50	49.670	Cricetulus_griseus_chok1gshd
ENSORLG00000000343	secisbp2	69	49.451	ENSCGRG00000002600	Secisbp2	50	49.670	Cricetulus_griseus_crigri
ENSORLG00000000343	secisbp2	98	58.869	ENSCVAG00000015876	secisbp2	94	55.989	Cyprinodon_variegatus
ENSORLG00000000343	secisbp2	85	55.773	ENSDARG00000073892	secisbp2	98	55.654	Danio_rerio
ENSORLG00000000343	secisbp2	95	42.438	ENSDORG00000023182	Secisbp2	50	51.515	Dipodomys_ordii
ENSORLG00000000343	secisbp2	54	46.000	ENSEBUG00000008208	secisbp2	90	46.000	Eptatretus_burgeri
ENSORLG00000000343	secisbp2	69	51.082	ENSEASG00005013960	SECISBP2	50	51.082	Equus_asinus_asinus
ENSORLG00000000343	secisbp2	69	51.096	ENSECAG00000015868	SECISBP2	50	51.096	Equus_caballus
ENSORLG00000000343	secisbp2	66	55.658	ENSELUG00000014795	-	92	55.658	Esox_lucius
ENSORLG00000000343	secisbp2	62	53.922	ENSFCAG00000004214	SECISBP2	54	50.439	Felis_catus
ENSORLG00000000343	secisbp2	83	45.424	ENSFALG00000012441	SECISBP2	64	46.531	Ficedula_albicollis
ENSORLG00000000343	secisbp2	72	50.426	ENSFDAG00000021183	SECISBP2	50	50.740	Fukomys_damarensis
ENSORLG00000000343	secisbp2	99	59.169	ENSFHEG00000004095	secisbp2	95	57.390	Fundulus_heteroclitus
ENSORLG00000000343	secisbp2	50	68.860	ENSGMOG00000017234	secisbp2	69	66.031	Gadus_morhua
ENSORLG00000000343	secisbp2	78	40.917	ENSGMOG00000014876	SECISBP2L	52	41.208	Gadus_morhua
ENSORLG00000000343	secisbp2	92	38.630	ENSGALG00000041362	SECISBP2L	66	38.484	Gallus_gallus
ENSORLG00000000343	secisbp2	83	45.333	ENSGALG00000010694	SECISBP2	61	46.949	Gallus_gallus
ENSORLG00000000343	secisbp2	99	59.527	ENSGAFG00000016947	secisbp2	95	57.867	Gambusia_affinis
ENSORLG00000000343	secisbp2	92	59.937	ENSGACG00000013757	secisbp2	99	60.254	Gasterosteus_aculeatus
ENSORLG00000000343	secisbp2	72	48.847	ENSGGOG00000000453	SECISBP2	56	49.372	Gorilla_gorilla
ENSORLG00000000343	secisbp2	64	68.095	ENSHBUG00000007014	secisbp2	100	68.095	Haplochromis_burtoni
ENSORLG00000000343	secisbp2	90	50.796	ENSHCOG00000008010	secisbp2	86	51.752	Hippocampus_comes
ENSORLG00000000343	secisbp2	92	50.998	ENSIPUG00000015393	secisbp2	81	51.314	Ictalurus_punctatus
ENSORLG00000000343	secisbp2	87	39.916	ENSJJAG00000020492	Secisbp2	50	50.331	Jaculus_jaculus
ENSORLG00000000343	secisbp2	96	58.060	ENSKMAG00000007129	secisbp2	93	56.540	Kryptolebias_marmoratus
ENSORLG00000000343	secisbp2	97	57.504	ENSLBEG00000026023	secisbp2	90	56.000	Labrus_bergylta
ENSORLG00000000343	secisbp2	71	50.309	ENSLACG00000005735	SECISBP2	87	51.351	Latimeria_chalumnae
ENSORLG00000000343	secisbp2	83	55.986	ENSLOCG00000011742	secisbp2	94	55.986	Lepisosteus_oculatus
ENSORLG00000000343	secisbp2	90	39.381	ENSLAFG00000012998	SECISBP2	74	36.270	Loxodonta_africana
ENSORLG00000000343	secisbp2	69	49.891	ENSMFAG00000003045	SECISBP2	55	49.892	Macaca_fascicularis
ENSORLG00000000343	secisbp2	69	50.109	ENSMMUG00000012532	SECISBP2	55	50.108	Macaca_mulatta
ENSORLG00000000343	secisbp2	69	49.020	ENSMNEG00000031737	SECISBP2	54	49.458	Macaca_nemestrina
ENSORLG00000000343	secisbp2	69	49.673	ENSMLEG00000028868	SECISBP2	54	50.108	Mandrillus_leucophaeus
ENSORLG00000000343	secisbp2	98	57.471	ENSMAMG00000006644	secisbp2	95	56.258	Mastacembelus_armatus
ENSORLG00000000343	secisbp2	97	56.745	ENSMZEG00005013614	secisbp2	94	54.521	Maylandia_zebra
ENSORLG00000000343	secisbp2	92	38.630	ENSMGAG00000007165	SECISBP2L	62	38.171	Meleagris_gallopavo
ENSORLG00000000343	secisbp2	83	40.973	ENSMAUG00000008659	Secisbp2	51	49.231	Mesocricetus_auratus
ENSORLG00000000343	secisbp2	69	49.785	ENSMICG00000001176	SECISBP2	54	49.679	Microcebus_murinus
ENSORLG00000000343	secisbp2	69	48.908	ENSMOCG00000000616	Secisbp2	50	49.345	Microtus_ochrogaster
ENSORLG00000000343	secisbp2	68	64.773	ENSMMOG00000017977	secisbp2	99	64.773	Mola_mola
ENSORLG00000000343	secisbp2	83	41.983	ENSMODG00000013365	SECISBP2	53	51.983	Monodelphis_domestica
ENSORLG00000000343	secisbp2	98	58.859	ENSMALG00000004907	secisbp2	95	56.988	Monopterus_albus
ENSORLG00000000343	secisbp2	59	45.592	MGP_CAROLIEiJ_G0024231	Secisbp2l	76	48.512	Mus_caroli
ENSORLG00000000343	secisbp2	69	50.545	MGP_CAROLIEiJ_G0018518	Secisbp2	50	50.435	Mus_caroli
ENSORLG00000000343	secisbp2	59	45.592	ENSMUSG00000035093	Secisbp2l	75	48.512	Mus_musculus
ENSORLG00000000343	secisbp2	69	50.217	ENSMUSG00000035139	Secisbp2	50	50.325	Mus_musculus
ENSORLG00000000343	secisbp2	59	45.340	MGP_PahariEiJ_G0025677	Secisbp2l	76	48.214	Mus_pahari
ENSORLG00000000343	secisbp2	69	50.873	MGP_PahariEiJ_G0019584	Secisbp2	50	50.873	Mus_pahari
ENSORLG00000000343	secisbp2	69	49.892	MGP_SPRETEiJ_G0019399	Secisbp2	50	49.785	Mus_spretus
ENSORLG00000000343	secisbp2	55	48.087	MGP_SPRETEiJ_G0025151	Secisbp2l	76	48.512	Mus_spretus
ENSORLG00000000343	secisbp2	69	49.561	ENSMPUG00000008495	-	77	49.561	Mustela_putorius_furo
ENSORLG00000000343	secisbp2	69	49.451	ENSNGAG00000002364	Secisbp2	50	49.892	Nannospalax_galili
ENSORLG00000000343	secisbp2	98	56.559	ENSNBRG00000022804	secisbp2	94	55.277	Neolamprologus_brichardi
ENSORLG00000000343	secisbp2	72	49.266	ENSNLEG00000008739	SECISBP2	56	49.372	Nomascus_leucogenys
ENSORLG00000000343	secisbp2	69	46.000	ENSOPRG00000007588	SECISBP2	52	46.000	Ochotona_princeps
ENSORLG00000000343	secisbp2	69	50.218	ENSODEG00000000675	SECISBP2	50	51.435	Octodon_degus
ENSORLG00000000343	secisbp2	78	65.049	ENSONIG00000016931	secisbp2	100	68.657	Oreochromis_niloticus
ENSORLG00000000343	secisbp2	72	49.683	ENSOCUG00000012932	SECISBP2	52	49.687	Oryctolagus_cuniculus
ENSORLG00000000343	secisbp2	100	97.823	ENSORLG00020012878	secisbp2	100	97.823	Oryzias_latipes_hni
ENSORLG00000000343	secisbp2	100	98.095	ENSORLG00015004559	secisbp2	100	98.095	Oryzias_latipes_hsok
ENSORLG00000000343	secisbp2	99	77.429	ENSOMEG00000008595	secisbp2	99	76.327	Oryzias_melastigma
ENSORLG00000000343	secisbp2	69	50.866	ENSOARG00000007741	SECISBP2	50	50.866	Ovis_aries
ENSORLG00000000343	secisbp2	72	49.057	ENSPPAG00000012385	SECISBP2	56	49.582	Pan_paniscus
ENSORLG00000000343	secisbp2	62	54.054	ENSPPRG00000023911	SECISBP2	50	50.769	Panthera_pardus
ENSORLG00000000343	secisbp2	72	49.266	ENSPTRG00000021094	SECISBP2	57	49.791	Pan_troglodytes
ENSORLG00000000343	secisbp2	69	49.237	ENSPANG00000024873	SECISBP2	50	49.783	Papio_anubis
ENSORLG00000000343	secisbp2	97	48.204	ENSPKIG00000006499	SECISBP2	83	48.000	Paramormyrops_kingsleyae
ENSORLG00000000343	secisbp2	79	41.385	ENSPKIG00000020244	SECISBP2L	52	41.349	Paramormyrops_kingsleyae
ENSORLG00000000343	secisbp2	86	44.316	ENSPSIG00000016257	SECISBP2	73	46.318	Pelodiscus_sinensis
ENSORLG00000000343	secisbp2	69	49.890	ENSPEMG00000020212	Secisbp2	50	50.330	Peromyscus_maniculatus_bairdii
ENSORLG00000000343	secisbp2	98	60.180	ENSPFOG00000008146	secisbp2	100	59.968	Poecilia_formosa
ENSORLG00000000343	secisbp2	67	70.320	ENSPLAG00000004505	secisbp2	99	70.320	Poecilia_latipinna
ENSORLG00000000343	secisbp2	98	60.090	ENSPMEG00000013702	secisbp2	96	57.332	Poecilia_mexicana
ENSORLG00000000343	secisbp2	94	60.574	ENSPREG00000008117	secisbp2	96	56.992	Poecilia_reticulata
ENSORLG00000000343	secisbp2	72	49.266	ENSPPYG00000019359	SECISBP2	52	49.791	Pongo_abelii
ENSORLG00000000343	secisbp2	89	40.063	ENSPCAG00000000559	-	51	46.288	Procavia_capensis
ENSORLG00000000343	secisbp2	69	49.569	ENSPCOG00000013354	SECISBP2	50	50.540	Propithecus_coquereli
ENSORLG00000000343	secisbp2	97	56.598	ENSPNYG00000016799	secisbp2	94	54.388	Pundamilia_nyererei
ENSORLG00000000343	secisbp2	95	49.773	ENSPNAG00000029922	secisbp2	87	49.626	Pygocentrus_nattereri
ENSORLG00000000343	secisbp2	69	50.218	ENSRNOG00000013773	Secisbp2	50	50.218	Rattus_norvegicus
ENSORLG00000000343	secisbp2	69	49.891	ENSRBIG00000044115	SECISBP2	50	50.325	Rhinopithecus_bieti
ENSORLG00000000343	secisbp2	69	49.673	ENSRROG00000030742	SECISBP2	51	54.000	Rhinopithecus_roxellana
ENSORLG00000000343	secisbp2	69	50.109	ENSSBOG00000015392	SECISBP2	54	54.500	Saimiri_boliviensis_boliviensis
ENSORLG00000000343	secisbp2	90	41.705	ENSSHAG00000005947	SECISBP2	51	51.931	Sarcophilus_harrisii
ENSORLG00000000343	secisbp2	96	45.044	ENSSFOG00015010409	secisbp2	91	45.259	Scleropages_formosus
ENSORLG00000000343	secisbp2	99	58.242	ENSSMAG00000008472	secisbp2	99	60.483	Scophthalmus_maximus
ENSORLG00000000343	secisbp2	97	60.921	ENSSDUG00000002089	secisbp2	93	58.496	Seriola_dumerili
ENSORLG00000000343	secisbp2	98	59.602	ENSSLDG00000003510	secisbp2	93	57.769	Seriola_lalandi_dorsalis
ENSORLG00000000343	secisbp2	81	46.712	ENSSPUG00000009635	SECISBP2	72	46.712	Sphenodon_punctatus
ENSORLG00000000343	secisbp2	99	60.983	ENSSPAG00000013606	secisbp2	93	59.705	Stegastes_partitus
ENSORLG00000000343	secisbp2	74	49.184	ENSTGUG00000000440	SECISBP2	84	49.278	Taeniopygia_guttata
ENSORLG00000000343	secisbp2	99	55.045	ENSTRUG00000016835	secisbp2	99	53.186	Takifugu_rubripes
ENSORLG00000000343	secisbp2	76	61.078	ENSTNIG00000015576	secisbp2	98	61.382	Tetraodon_nigroviridis
ENSORLG00000000343	secisbp2	69	51.948	ENSUAMG00000016243	SECISBP2	50	56.049	Ursus_americanus
ENSORLG00000000343	secisbp2	69	51.515	ENSUMAG00000016261	SECISBP2	50	54.568	Ursus_maritimus
ENSORLG00000000343	secisbp2	69	50.743	ENSVVUG00000022278	SECISBP2	53	50.743	Vulpes_vulpes
ENSORLG00000000343	secisbp2	69	48.812	ENSXETG00000029955	SECISBP2	80	48.812	Xenopus_tropicalis
ENSORLG00000000343	secisbp2	70	65.217	ENSXCOG00000009547	secisbp2	73	65.217	Xiphophorus_couchianus
ENSORLG00000000343	secisbp2	99	59.211	ENSXMAG00000003090	secisbp2	95	57.314	Xiphophorus_maculatus