EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000000602 (Gene tree)
Gene ID: 101173484
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4017 bases
Position: chr13:2440157-2444173
Accession: 101173484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000041071	MMR_HSR1	PF01926.23	6.9e-05	1	1
ENSORLP00000044844	MMR_HSR1	PF01926.23	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000027265	-	1656	-	ENSORLP00000044844	213 (aa)	-	UPI0005CC37EE
ENSORLT00000039241	-	1584	XM_011482172	ENSORLP00000041071	213 (aa)	XP_011480474	UPI0005CC37EE
ENSORLT00000000742	-	285	-	ENSORLP00000000742	94 (aa)	-	H2L4P5

Gene Model

Click here to download ENSORLG00000000602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000000602	zgc:171927	78	34.503	ENSORLG00000027892	RAB29	84	34.503
ENSORLG00000000602	zgc:171927	55	30.833	ENSORLG00000029448	arl4aa	61	30.833
ENSORLG00000000602	zgc:171927	79	50.296	ENSORLG00000010846	rab15	79	50.296
ENSORLG00000000602	zgc:171927	99	45.714	ENSORLG00000016126	rab11al	96	45.714
ENSORLG00000000602	zgc:171927	76	48.765	ENSORLG00000009609	rab18b	79	48.765
ENSORLG00000000602	zgc:171927	83	37.853	ENSORLG00000026197	rab6a	81	37.853
ENSORLG00000000602	zgc:171927	78	53.614	ENSORLG00000029812	rab30	82	53.614
ENSORLG00000000602	zgc:171927	73	35.849	ENSORLG00000009874	rabl2	67	35.849
ENSORLG00000000602	zgc:171927	99	44.762	ENSORLG00000015284	-	69	44.762
ENSORLG00000000602	zgc:171927	72	32.468	ENSORLG00000001566	rhebl1	83	32.468
ENSORLG00000000602	zgc:171927	76	64.815	ENSORLG00000028885	rab35b	80	64.815
ENSORLG00000000602	zgc:171927	77	59.509	ENSORLG00000001098	si:dkey-16l2.16	77	59.509
ENSORLG00000000602	zgc:171927	99	46.667	ENSORLG00000018331	RAB11A	96	46.667
ENSORLG00000000602	zgc:171927	91	46.114	ENSORLG00000013432	rab2a	88	46.114
ENSORLG00000000602	zgc:171927	69	45.098	ENSORLG00000002071	-	63	45.098
ENSORLG00000000602	zgc:171927	98	41.148	ENSORLG00000016135	rab25b	98	40.887
ENSORLG00000000602	zgc:171927	86	42.473	ENSORLG00000016555	rab3db	92	41.885
ENSORLG00000000602	zgc:171927	91	42.289	ENSORLG00000007406	rab14	93	42.289
ENSORLG00000000602	zgc:171927	99	45.024	ENSORLG00000015307	rab11ba	96	45.024
ENSORLG00000000602	zgc:171927	94	35.821	ENSORLG00000016290	rab6bb	90	35.821
ENSORLG00000000602	zgc:171927	76	39.752	ENSORLG00000027669	RAB41	76	39.752
ENSORLG00000000602	zgc:171927	75	39.264	ENSORLG00000001351	-	79	39.264
ENSORLG00000000602	zgc:171927	84	81.215	ENSORLG00000028104	rab1ab	90	81.215
ENSORLG00000000602	zgc:171927	99	44.762	ENSORLG00000013938	rab11bb	96	44.762
ENSORLG00000000602	zgc:171927	85	48.066	ENSORLG00000004624	rab18a	79	50.617
ENSORLG00000000602	zgc:171927	79	44.444	ENSORLG00000001850	RAB39B	80	44.444
ENSORLG00000000602	zgc:171927	82	43.678	ENSORLG00000012261	rab5aa	81	43.678
ENSORLG00000000602	zgc:171927	75	39.264	ENSORLG00000029090	-	79	39.264
ENSORLG00000000602	zgc:171927	89	42.995	ENSORLG00000030642	zgc:101559	89	42.995
ENSORLG00000000602	zgc:171927	83	33.333	ENSORLG00000025519	rras	90	33.333
ENSORLG00000000602	zgc:171927	76	38.650	ENSORLG00000024443	zgc:55558	87	38.650
ENSORLG00000000602	zgc:171927	55	31.092	ENSORLG00000028909	arl8a	61	31.092
ENSORLG00000000602	zgc:171927	81	41.081	ENSORLG00000030109	rab33ba	79	41.081
ENSORLG00000000602	zgc:171927	74	39.873	ENSORLG00000010115	rab23	87	37.640
ENSORLG00000000602	zgc:171927	74	39.130	ENSORLG00000004394	rab34a	61	39.130
ENSORLG00000000602	zgc:171927	98	40.476	ENSORLG00000012158	rab25a	96	40.476
ENSORLG00000000602	zgc:171927	82	32.571	ENSORLG00000003681	rheb	90	32.571
ENSORLG00000000602	zgc:171927	96	34.112	ENSORLG00000000937	-	93	34.112
ENSORLG00000000602	zgc:171927	77	41.176	ENSORLG00000030566	rab33a	61	41.176
ENSORLG00000000602	zgc:171927	56	32.500	ENSORLG00000027941	arl8ba	62	32.500
ENSORLG00000000602	zgc:171927	83	46.067	ENSORLG00000003902	rab12	71	47.093
ENSORLG00000000602	zgc:171927	76	51.235	ENSORLG00000024116	RAB15	78	51.235
ENSORLG00000000602	zgc:171927	92	74.242	ENSORLG00000021846	-	98	74.242
ENSORLG00000000602	zgc:171927	80	37.714	ENSORLG00000006405	rab9b	82	37.714
ENSORLG00000000602	zgc:171927	79	42.690	ENSORLG00000008345	-	80	42.690
ENSORLG00000000602	zgc:171927	84	56.180	ENSORLG00000025395	-	89	56.180
ENSORLG00000000602	zgc:171927	77	45.122	ENSORLG00000024558	-	68	44.654
ENSORLG00000000602	zgc:171927	74	39.752	ENSORLG00000003119	rab34b	59	39.752
ENSORLG00000000602	zgc:171927	76	36.970	ENSORLG00000006628	-	79	36.970
ENSORLG00000000602	zgc:171927	79	38.728	ENSORLG00000024102	kras	90	38.728
ENSORLG00000000602	zgc:171927	55	30.508	ENSORLG00000012782	arl8bb	61	30.508
ENSORLG00000000602	zgc:171927	90	42.211	ENSORLG00000029921	-	92	42.211
ENSORLG00000000602	zgc:171927	78	32.738	ENSORLG00000025819	-	91	32.738
ENSORLG00000000602	zgc:171927	80	44.186	ENSORLG00000022335	rab42a	79	44.186
ENSORLG00000000602	zgc:171927	98	36.744	ENSORLG00000014099	si:dkey-34d22.5	97	36.744
ENSORLG00000000602	zgc:171927	77	35.928	ENSORLG00000018119	si:ch73-116o1.2	80	35.714
ENSORLG00000000602	zgc:171927	72	37.342	ENSORLG00000025098	si:dkey-13a21.4	78	37.342
ENSORLG00000000602	zgc:171927	76	37.654	ENSORLG00000018912	hrasb	85	37.654
ENSORLG00000000602	zgc:171927	73	37.107	ENSORLG00000017806	rab9a	79	37.107
ENSORLG00000000602	zgc:171927	76	44.099	ENSORLG00000003882	rab5c	89	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000602	zgc:171927	100	92.523	ENSAPOG00000004980	-	100	92.523	Acanthochromis_polyacanthus
ENSORLG00000000602	zgc:171927	100	90.654	ENSACIG00000009006	zgc:171927	100	90.654	Amphilophus_citrinellus
ENSORLG00000000602	zgc:171927	100	91.121	ENSAOCG00000024149	-	100	91.121	Amphiprion_ocellaris
ENSORLG00000000602	zgc:171927	71	88.387	ENSAOCG00000013808	-	93	96.694	Amphiprion_ocellaris
ENSORLG00000000602	zgc:171927	100	91.589	ENSAPEG00000022171	zgc:171927	99	91.589	Amphiprion_percula
ENSORLG00000000602	zgc:171927	100	91.589	ENSATEG00000003430	zgc:171927	100	91.589	Anabas_testudineus
ENSORLG00000000602	zgc:171927	100	90.141	ENSACLG00000013734	-	100	90.141	Astatotilapia_calliptera
ENSORLG00000000602	zgc:171927	100	78.505	ENSAMXG00000039486	zgc:171927	100	78.505	Astyanax_mexicanus
ENSORLG00000000602	zgc:171927	100	88.318	ENSCSEG00000014416	zgc:171927	100	88.318	Cynoglossus_semilaevis
ENSORLG00000000602	zgc:171927	100	90.654	ENSCVAG00000009222	zgc:171927	100	90.654	Cyprinodon_variegatus
ENSORLG00000000602	zgc:171927	100	78.505	ENSDARG00000033056	zgc:171927	100	78.505	Danio_rerio
ENSORLG00000000602	zgc:171927	94	82.090	ENSELUG00000011680	zgc:171927	99	78.972	Esox_lucius
ENSORLG00000000602	zgc:171927	100	91.121	ENSFHEG00000022176	zgc:171927	100	91.121	Fundulus_heteroclitus
ENSORLG00000000602	zgc:171927	98	80.476	ENSGMOG00000004979	-	97	80.476	Gadus_morhua
ENSORLG00000000602	zgc:171927	98	89.474	ENSGAFG00000015702	zgc:171927	84	89.474	Gambusia_affinis
ENSORLG00000000602	zgc:171927	100	88.785	ENSGACG00000013401	zgc:171927	99	88.785	Gasterosteus_aculeatus
ENSORLG00000000602	zgc:171927	100	90.141	ENSHBUG00000002397	-	100	90.141	Haplochromis_burtoni
ENSORLG00000000602	zgc:171927	100	90.654	ENSKMAG00000009856	zgc:171927	100	90.654	Kryptolebias_marmoratus
ENSORLG00000000602	zgc:171927	100	88.318	ENSLBEG00000005791	-	100	88.318	Labrus_bergylta
ENSORLG00000000602	zgc:171927	98	87.560	ENSLBEG00000027226	-	89	87.560	Labrus_bergylta
ENSORLG00000000602	zgc:171927	98	70.813	ENSLOCG00000014692	zgc:171927	96	70.813	Lepisosteus_oculatus
ENSORLG00000000602	zgc:171927	100	87.850	ENSMAMG00000020135	zgc:171927	100	87.850	Mastacembelus_armatus
ENSORLG00000000602	zgc:171927	100	90.141	ENSMZEG00005024685	-	100	90.141	Maylandia_zebra
ENSORLG00000000602	zgc:171927	100	87.383	ENSMMOG00000009833	-	100	87.383	Mola_mola
ENSORLG00000000602	zgc:171927	100	88.732	ENSMALG00000021129	zgc:171927	100	88.732	Monopterus_albus
ENSORLG00000000602	zgc:171927	100	89.671	ENSNBRG00000006202	zgc:171927	100	89.671	Neolamprologus_brichardi
ENSORLG00000000602	zgc:171927	100	100.000	ENSORLG00020021071	zgc:171927	100	100.000	Oryzias_latipes_hni
ENSORLG00000000602	zgc:171927	100	99.061	ENSORLG00015010098	zgc:171927	100	99.061	Oryzias_latipes_hsok
ENSORLG00000000602	zgc:171927	100	94.393	ENSOMEG00000020594	zgc:171927	100	94.393	Oryzias_melastigma
ENSORLG00000000602	zgc:171927	100	90.187	ENSPFOG00000013810	zgc:171927	99	90.187	Poecilia_formosa
ENSORLG00000000602	zgc:171927	100	89.252	ENSPLAG00000005869	zgc:171927	100	89.252	Poecilia_latipinna
ENSORLG00000000602	zgc:171927	100	90.187	ENSPMEG00000022350	zgc:171927	100	90.187	Poecilia_mexicana
ENSORLG00000000602	zgc:171927	100	90.654	ENSPREG00000017517	zgc:171927	100	90.654	Poecilia_reticulata
ENSORLG00000000602	zgc:171927	100	90.141	ENSPNYG00000007520	-	100	90.141	Pundamilia_nyererei
ENSORLG00000000602	zgc:171927	100	78.972	ENSPNAG00000029574	zgc:171927	100	78.972	Pygocentrus_nattereri
ENSORLG00000000602	zgc:171927	100	77.103	ENSSFOG00015005464	zgc:171927	99	77.103	Scleropages_formosus
ENSORLG00000000602	zgc:171927	100	88.318	ENSSMAG00000004416	-	100	88.318	Scophthalmus_maximus
ENSORLG00000000602	zgc:171927	100	90.654	ENSSDUG00000004445	zgc:171927	100	90.654	Seriola_dumerili
ENSORLG00000000602	zgc:171927	100	90.654	ENSSLDG00000018024	zgc:171927	100	90.654	Seriola_lalandi_dorsalis
ENSORLG00000000602	zgc:171927	100	92.523	ENSSPAG00000013533	zgc:171927	100	92.523	Stegastes_partitus
ENSORLG00000000602	zgc:171927	100	91.121	ENSXCOG00000010695	zgc:171927	100	91.121	Xiphophorus_couchianus
ENSORLG00000000602	zgc:171927	100	91.121	ENSXMAG00000004683	zgc:171927	100	91.121	Xiphophorus_maculatus