EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000000676 (Gene tree)
Gene ID: 101171156
Gene Symbol: thumpd3
Alias: -
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 17715 bases
Position: chr5:2651171-2668885
Accession: 101171156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000000832	THUMP	PF02926.17	4.6e-10	1	1
ENSORLP00000034065	THUMP	PF02926.17	4.6e-10	1	1
ENSORLP00000000832	UPF0020	PF01170.18	3.1e-39	1	1
ENSORLP00000034065	UPF0020	PF01170.18	3.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000034083	-	2305	-	ENSORLP00000034065	478 (aa)	-	UPI0005CBAB3F
ENSORLT00000000833	-	2429	XM_011474643	ENSORLP00000000832	478 (aa)	XP_011472945	H2L4X7

Gene Model

Click here to download ENSORLG00000000676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000676	thumpd3	93	56.660	ENSG00000134077	THUMPD3	93	57.505	Homo_sapiens
ENSORLG00000000676	thumpd3	97	80.249	ENSAPOG00000015836	thumpd3	99	80.249	Acanthochromis_polyacanthus
ENSORLG00000000676	thumpd3	94	58.420	ENSAMEG00000011321	THUMPD3	95	59.459	Ailuropoda_melanoleuca
ENSORLG00000000676	thumpd3	99	78.659	ENSACIG00000020096	thumpd3	99	78.702	Amphilophus_citrinellus
ENSORLG00000000676	thumpd3	99	79.268	ENSAOCG00000004399	thumpd3	99	79.675	Amphiprion_ocellaris
ENSORLG00000000676	thumpd3	95	83.550	ENSAPEG00000016740	thumpd3	97	81.120	Amphiprion_percula
ENSORLG00000000676	thumpd3	99	77.347	ENSATEG00000005345	thumpd3	99	77.347	Anabas_testudineus
ENSORLG00000000676	thumpd3	77	61.735	ENSAPLG00000003598	THUMPD3	99	62.245	Anas_platyrhynchos
ENSORLG00000000676	thumpd3	90	59.667	ENSACAG00000014974	THUMPD3	92	60.208	Anolis_carolinensis
ENSORLG00000000676	thumpd3	93	56.448	ENSANAG00000002365	THUMPD3	93	57.294	Aotus_nancymaae
ENSORLG00000000676	thumpd3	84	54.634	ENSACLG00000013504	-	87	54.634	Astatotilapia_calliptera
ENSORLG00000000676	thumpd3	99	78.794	ENSACLG00000023333	thumpd3	97	78.794	Astatotilapia_calliptera
ENSORLG00000000676	thumpd3	91	71.175	ENSAMXG00000015683	thumpd3	95	71.175	Astyanax_mexicanus
ENSORLG00000000676	thumpd3	94	58.299	ENSBTAG00000003112	THUMPD3	95	58.628	Bos_taurus
ENSORLG00000000676	thumpd3	86	36.779	WBGene00010846	M04B2.2	96	37.019	Caenorhabditis_elegans
ENSORLG00000000676	thumpd3	93	57.082	ENSCJAG00000015949	THUMPD3	93	57.082	Callithrix_jacchus
ENSORLG00000000676	thumpd3	75	58.808	ENSCAFG00000008060	-	93	59.845	Canis_familiaris
ENSORLG00000000676	thumpd3	94	58.628	ENSCAFG00000005499	THUMPD3	95	59.459	Canis_familiaris
ENSORLG00000000676	thumpd3	80	59.854	ENSCAFG00020025887	-	94	60.827	Canis_lupus_dingo
ENSORLG00000000676	thumpd3	94	58.628	ENSCAFG00020008895	-	95	59.459	Canis_lupus_dingo
ENSORLG00000000676	thumpd3	94	58.628	ENSCHIG00000024037	THUMPD3	94	59.044	Capra_hircus
ENSORLG00000000676	thumpd3	90	59.436	ENSTSYG00000000159	THUMPD3	91	59.436	Carlito_syrichta
ENSORLG00000000676	thumpd3	85	41.106	ENSCAPG00000017486	THUMPD3	83	41.346	Cavia_aperea
ENSORLG00000000676	thumpd3	91	58.515	ENSCPOG00000033287	THUMPD3	91	58.515	Cavia_porcellus
ENSORLG00000000676	thumpd3	91	57.576	ENSCCAG00000027067	-	91	58.442	Cebus_capucinus
ENSORLG00000000676	thumpd3	91	51.732	ENSCCAG00000021429	-	93	52.527	Cebus_capucinus
ENSORLG00000000676	thumpd3	94	56.458	ENSCATG00000040999	THUMPD3	95	57.292	Cercocebus_atys
ENSORLG00000000676	thumpd3	91	59.219	ENSCLAG00000000690	THUMPD3	91	59.219	Chinchilla_lanigera
ENSORLG00000000676	thumpd3	94	56.250	ENSCSAG00000010753	THUMPD3	95	57.083	Chlorocebus_sabaeus
ENSORLG00000000676	thumpd3	76	50.598	ENSCHOG00000012851	THUMPD3	75	50.598	Choloepus_hoffmanni
ENSORLG00000000676	thumpd3	89	61.555	ENSCPBG00000014771	THUMPD3	91	61.555	Chrysemys_picta_bellii
ENSORLG00000000676	thumpd3	90	43.448	ENSCSAVG00000008668	-	97	43.448	Ciona_savignyi
ENSORLG00000000676	thumpd3	94	56.458	ENSCANG00000031901	THUMPD3	95	57.292	Colobus_angolensis_palliatus
ENSORLG00000000676	thumpd3	94	57.917	ENSCGRG00001024117	Thumpd3	94	58.316	Cricetulus_griseus_chok1gshd
ENSORLG00000000676	thumpd3	94	57.917	ENSCGRG00000018116	Thumpd3	94	58.316	Cricetulus_griseus_crigri
ENSORLG00000000676	thumpd3	94	78.478	ENSCSEG00000002546	thumpd3	99	75.514	Cynoglossus_semilaevis
ENSORLG00000000676	thumpd3	94	80.217	ENSCVAG00000001019	thumpd3	98	76.518	Cyprinodon_variegatus
ENSORLG00000000676	thumpd3	95	66.667	ENSDARG00000059634	thumpd3	99	66.667	Danio_rerio
ENSORLG00000000676	thumpd3	99	55.842	ENSDNOG00000047668	THUMPD3	96	56.634	Dasypus_novemcinctus
ENSORLG00000000676	thumpd3	91	58.531	ENSDORG00000003257	Thumpd3	92	58.531	Dipodomys_ordii
ENSORLG00000000676	thumpd3	58	54.934	ENSETEG00000020239	-	59	55.921	Echinops_telfairi
ENSORLG00000000676	thumpd3	88	54.195	ENSEBUG00000004221	thumpd3	97	54.195	Eptatretus_burgeri
ENSORLG00000000676	thumpd3	94	57.380	ENSEASG00005013327	THUMPD3	95	58.004	Equus_asinus_asinus
ENSORLG00000000676	thumpd3	94	59.252	ENSECAG00000002016	THUMPD3	95	59.875	Equus_caballus
ENSORLG00000000676	thumpd3	95	53.292	ENSEEUG00000014696	THUMPD3	95	54.321	Erinaceus_europaeus
ENSORLG00000000676	thumpd3	90	76.730	ENSELUG00000018246	thumpd3	91	73.043	Esox_lucius
ENSORLG00000000676	thumpd3	92	57.906	ENSFCAG00000006171	THUMPD3	93	58.974	Felis_catus
ENSORLG00000000676	thumpd3	84	57.534	ENSFALG00000013631	THUMPD3	91	57.763	Ficedula_albicollis
ENSORLG00000000676	thumpd3	90	58.333	ENSFDAG00000014825	THUMPD3	90	59.649	Fukomys_damarensis
ENSORLG00000000676	thumpd3	99	78.138	ENSFHEG00000006006	thumpd3	99	78.745	Fundulus_heteroclitus
ENSORLG00000000676	thumpd3	92	70.288	ENSGMOG00000007923	thumpd3	92	70.889	Gadus_morhua
ENSORLG00000000676	thumpd3	89	58.672	ENSGALG00000044813	THUMPD3	94	59.315	Gallus_gallus
ENSORLG00000000676	thumpd3	99	77.778	ENSGAFG00000021645	thumpd3	99	77.778	Gambusia_affinis
ENSORLG00000000676	thumpd3	94	78.571	ENSGACG00000000930	thumpd3	98	78.571	Gasterosteus_aculeatus
ENSORLG00000000676	thumpd3	93	58.551	ENSGAGG00000022750	THUMPD3	97	58.551	Gopherus_agassizii
ENSORLG00000000676	thumpd3	93	56.237	ENSGGOG00000000604	THUMPD3	93	57.082	Gorilla_gorilla
ENSORLG00000000676	thumpd3	99	78.675	ENSHBUG00000013405	thumpd3	97	78.675	Haplochromis_burtoni
ENSORLG00000000676	thumpd3	91	57.609	ENSHGLG00000016200	THUMPD3	91	58.696	Heterocephalus_glaber_female
ENSORLG00000000676	thumpd3	88	51.116	ENSHGLG00100000505	-	92	52.232	Heterocephalus_glaber_male
ENSORLG00000000676	thumpd3	91	57.701	ENSHGLG00100017321	-	91	58.568	Heterocephalus_glaber_male
ENSORLG00000000676	thumpd3	95	76.890	ENSHCOG00000004871	thumpd3	97	77.538	Hippocampus_comes
ENSORLG00000000676	thumpd3	91	71.047	ENSIPUG00000019415	THUMPD3	92	71.047	Ictalurus_punctatus
ENSORLG00000000676	thumpd3	92	59.236	ENSSTOG00000003973	THUMPD3	93	59.236	Ictidomys_tridecemlineatus
ENSORLG00000000676	thumpd3	95	51.464	ENSJJAG00000017751	Thumpd3	93	52.510	Jaculus_jaculus
ENSORLG00000000676	thumpd3	99	78.468	ENSKMAG00000021025	thumpd3	93	78.468	Kryptolebias_marmoratus
ENSORLG00000000676	thumpd3	94	84.176	ENSLBEG00000012252	thumpd3	97	81.971	Labrus_bergylta
ENSORLG00000000676	thumpd3	90	60.521	ENSLACG00000018604	THUMPD3	94	59.044	Latimeria_chalumnae
ENSORLG00000000676	thumpd3	90	64.026	ENSLOCG00000009800	thumpd3	95	64.026	Lepisosteus_oculatus
ENSORLG00000000676	thumpd3	91	59.657	ENSLAFG00000005103	THUMPD3	92	59.657	Loxodonta_africana
ENSORLG00000000676	thumpd3	94	56.667	ENSMFAG00000044884	THUMPD3	95	57.500	Macaca_fascicularis
ENSORLG00000000676	thumpd3	94	56.667	ENSMMUG00000017307	THUMPD3	95	57.500	Macaca_mulatta
ENSORLG00000000676	thumpd3	94	56.667	ENSMNEG00000030529	THUMPD3	95	57.500	Macaca_nemestrina
ENSORLG00000000676	thumpd3	94	56.458	ENSMLEG00000032943	THUMPD3	95	57.292	Mandrillus_leucophaeus
ENSORLG00000000676	thumpd3	95	79.130	ENSMAMG00000023934	thumpd3	94	79.526	Mastacembelus_armatus
ENSORLG00000000676	thumpd3	99	78.794	ENSMZEG00005010623	thumpd3	97	78.794	Maylandia_zebra
ENSORLG00000000676	thumpd3	79	59.398	ENSMGAG00000010182	THUMPD3	100	60.401	Meleagris_gallopavo
ENSORLG00000000676	thumpd3	94	58.836	ENSMAUG00000012250	Thumpd3	95	58.836	Mesocricetus_auratus
ENSORLG00000000676	thumpd3	92	56.108	ENSMICG00000010095	THUMPD3	92	56.108	Microcebus_murinus
ENSORLG00000000676	thumpd3	93	57.053	ENSMOCG00000020148	Thumpd3	94	57.895	Microtus_ochrogaster
ENSORLG00000000676	thumpd3	99	77.871	ENSMMOG00000021791	thumpd3	97	80.795	Mola_mola
ENSORLG00000000676	thumpd3	91	56.211	ENSMODG00000004715	-	92	57.053	Monodelphis_domestica
ENSORLG00000000676	thumpd3	95	76.809	ENSMALG00000017316	thumpd3	99	76.809	Monopterus_albus
ENSORLG00000000676	thumpd3	55	54.422	MGP_CAROLIEiJ_G0028714	-	61	54.422	Mus_caroli
ENSORLG00000000676	thumpd3	92	58.511	ENSMUSG00000030264	Thumpd3	93	58.511	Mus_musculus
ENSORLG00000000676	thumpd3	90	59.430	MGP_PahariEiJ_G0022465	Thumpd3	92	59.267	Mus_pahari
ENSORLG00000000676	thumpd3	92	58.511	MGP_SPRETEiJ_G0029742	Thumpd3	93	58.511	Mus_spretus
ENSORLG00000000676	thumpd3	91	59.013	ENSMPUG00000017066	-	92	59.227	Mustela_putorius_furo
ENSORLG00000000676	thumpd3	91	53.780	ENSMPUG00000005219	-	92	54.212	Mustela_putorius_furo
ENSORLG00000000676	thumpd3	97	55.936	ENSMLUG00000008538	THUMPD3	97	56.539	Myotis_lucifugus
ENSORLG00000000676	thumpd3	94	48.918	ENSNGAG00000001549	-	93	49.134	Nannospalax_galili
ENSORLG00000000676	thumpd3	90	58.425	ENSNGAG00000021014	-	90	59.300	Nannospalax_galili
ENSORLG00000000676	thumpd3	99	78.468	ENSNBRG00000004886	thumpd3	97	78.468	Neolamprologus_brichardi
ENSORLG00000000676	thumpd3	90	57.952	ENSNLEG00000003863	THUMPD3	91	58.824	Nomascus_leucogenys
ENSORLG00000000676	thumpd3	81	58.981	ENSMEUG00000009819	THUMPD3	98	58.981	Notamacropus_eugenii
ENSORLG00000000676	thumpd3	81	57.869	ENSOPRG00000002020	THUMPD3	98	59.080	Ochotona_princeps
ENSORLG00000000676	thumpd3	69	55.618	ENSODEG00000018242	THUMPD3	100	57.022	Octodon_degus
ENSORLG00000000676	thumpd3	99	78.208	ENSONIG00000018977	thumpd3	99	78.615	Oreochromis_niloticus
ENSORLG00000000676	thumpd3	80	55.314	ENSOANG00000014481	THUMPD3	97	56.522	Ornithorhynchus_anatinus
ENSORLG00000000676	thumpd3	94	57.588	ENSOCUG00000010921	THUMPD3	95	57.018	Oryctolagus_cuniculus
ENSORLG00000000676	thumpd3	100	98.745	ENSORLG00020007509	thumpd3	100	98.745	Oryzias_latipes_hni
ENSORLG00000000676	thumpd3	100	99.372	ENSORLG00015003615	thumpd3	100	99.372	Oryzias_latipes_hsok
ENSORLG00000000676	thumpd3	99	86.848	ENSOMEG00000014115	thumpd3	99	87.526	Oryzias_melastigma
ENSORLG00000000676	thumpd3	79	55.990	ENSOGAG00000017111	THUMPD3	99	57.213	Otolemur_garnettii
ENSORLG00000000676	thumpd3	97	57.631	ENSOARG00000007139	THUMPD3	95	58.032	Ovis_aries
ENSORLG00000000676	thumpd3	93	56.448	ENSPPAG00000025852	THUMPD3	93	57.294	Pan_paniscus
ENSORLG00000000676	thumpd3	92	58.723	ENSPPRG00000008071	THUMPD3	93	59.787	Panthera_pardus
ENSORLG00000000676	thumpd3	92	59.188	ENSPTIG00000017923	THUMPD3	93	59.188	Panthera_tigris_altaica
ENSORLG00000000676	thumpd3	93	56.448	ENSPTRG00000014585	THUMPD3	93	57.294	Pan_troglodytes
ENSORLG00000000676	thumpd3	97	55.332	ENSPANG00000016253	THUMPD3	98	56.137	Papio_anubis
ENSORLG00000000676	thumpd3	92	67.609	ENSPKIG00000014009	thumpd3	93	67.609	Paramormyrops_kingsleyae
ENSORLG00000000676	thumpd3	88	59.825	ENSPSIG00000007370	THUMPD3	91	59.267	Pelodiscus_sinensis
ENSORLG00000000676	thumpd3	92	77.978	ENSPMGG00000017563	thumpd3	94	77.978	Periophthalmus_magnuspinnatus
ENSORLG00000000676	thumpd3	93	57.353	ENSPEMG00000022411	Thumpd3	94	57.983	Peromyscus_maniculatus_bairdii
ENSORLG00000000676	thumpd3	90	54.362	ENSPMAG00000001291	thumpd3	99	55.257	Petromyzon_marinus
ENSORLG00000000676	thumpd3	91	57.021	ENSPCIG00000002049	THUMPD3	94	57.083	Phascolarctos_cinereus
ENSORLG00000000676	thumpd3	99	77.328	ENSPFOG00000002318	thumpd3	99	77.328	Poecilia_formosa
ENSORLG00000000676	thumpd3	99	77.328	ENSPLAG00000014804	thumpd3	99	77.328	Poecilia_latipinna
ENSORLG00000000676	thumpd3	99	77.328	ENSPMEG00000000582	thumpd3	99	77.328	Poecilia_mexicana
ENSORLG00000000676	thumpd3	99	78.068	ENSPREG00000009176	thumpd3	99	78.270	Poecilia_reticulata
ENSORLG00000000676	thumpd3	93	56.448	ENSPPYG00000029461	THUMPD3	93	57.294	Pongo_abelii
ENSORLG00000000676	thumpd3	87	45.833	ENSPPYG00000017616	-	88	45.833	Pongo_abelii
ENSORLG00000000676	thumpd3	81	58.273	ENSPCAG00000015398	THUMPD3	98	58.993	Procavia_capensis
ENSORLG00000000676	thumpd3	79	53.790	ENSPCOG00000023618	-	92	54.279	Propithecus_coquereli
ENSORLG00000000676	thumpd3	93	49.260	ENSPCOG00000018095	-	93	51.374	Propithecus_coquereli
ENSORLG00000000676	thumpd3	94	57.588	ENSPVAG00000008721	THUMPD3	95	58.212	Pteropus_vampyrus
ENSORLG00000000676	thumpd3	99	78.794	ENSPNYG00000006918	thumpd3	97	78.794	Pundamilia_nyererei
ENSORLG00000000676	thumpd3	94	69.737	ENSPNAG00000014936	thumpd3	95	69.737	Pygocentrus_nattereri
ENSORLG00000000676	thumpd3	94	56.224	ENSRNOG00000006941	Thumpd3	95	56.639	Rattus_norvegicus
ENSORLG00000000676	thumpd3	95	56.379	ENSRBIG00000035954	THUMPD3	96	57.202	Rhinopithecus_bieti
ENSORLG00000000676	thumpd3	95	56.173	ENSRROG00000035734	THUMPD3	96	56.996	Rhinopithecus_roxellana
ENSORLG00000000676	thumpd3	90	57.860	ENSSBOG00000023567	THUMPD3	93	58.980	Saimiri_boliviensis_boliviensis
ENSORLG00000000676	thumpd3	92	58.120	ENSSHAG00000014467	THUMPD3	93	58.174	Sarcophilus_harrisii
ENSORLG00000000676	thumpd3	96	67.089	ENSSFOG00015019210	thumpd3	96	67.089	Scleropages_formosus
ENSORLG00000000676	thumpd3	97	78.316	ENSSMAG00000000609	thumpd3	97	79.482	Scophthalmus_maximus
ENSORLG00000000676	thumpd3	99	78.850	ENSSDUG00000012179	thumpd3	98	80.128	Seriola_dumerili
ENSORLG00000000676	thumpd3	99	79.424	ENSSLDG00000022028	thumpd3	99	79.424	Seriola_lalandi_dorsalis
ENSORLG00000000676	thumpd3	79	66.234	ENSSARG00000002239	THUMPD3	81	66.234	Sorex_araneus
ENSORLG00000000676	thumpd3	55	30.451	ENSSPUG00000006316	THUMPD2	58	30.451	Sphenodon_punctatus
ENSORLG00000000676	thumpd3	94	59.016	ENSSPUG00000017461	THUMPD3	95	59.016	Sphenodon_punctatus
ENSORLG00000000676	thumpd3	99	78.528	ENSSPAG00000008345	thumpd3	98	78.528	Stegastes_partitus
ENSORLG00000000676	thumpd3	93	59.874	ENSSSCG00000011542	THUMPD3	94	60.504	Sus_scrofa
ENSORLG00000000676	thumpd3	88	60.850	ENSTGUG00000010440	THUMPD3	100	61.298	Taeniopygia_guttata
ENSORLG00000000676	thumpd3	94	70.575	ENSTRUG00000004420	thumpd3	96	70.575	Takifugu_rubripes
ENSORLG00000000676	thumpd3	92	79.545	ENSTNIG00000014627	thumpd3	96	79.545	Tetraodon_nigroviridis
ENSORLG00000000676	thumpd3	91	53.996	ENSTBEG00000003450	THUMPD3	90	55.076	Tupaia_belangeri
ENSORLG00000000676	thumpd3	96	56.122	ENSTTRG00000009694	THUMPD3	97	57.809	Tursiops_truncatus
ENSORLG00000000676	thumpd3	94	59.044	ENSUAMG00000009412	THUMPD3	95	59.459	Ursus_americanus
ENSORLG00000000676	thumpd3	94	62.227	ENSUMAG00000019241	THUMPD3	95	62.227	Ursus_maritimus
ENSORLG00000000676	thumpd3	79	54.902	ENSVPAG00000002855	THUMPD3	97	56.127	Vicugna_pacos
ENSORLG00000000676	thumpd3	94	58.628	ENSVVUG00000025278	THUMPD3	95	59.459	Vulpes_vulpes
ENSORLG00000000676	thumpd3	91	60.043	ENSXETG00000001447	thumpd3	91	60.043	Xenopus_tropicalis
ENSORLG00000000676	thumpd3	98	78.189	ENSXCOG00000000159	thumpd3	97	81.169	Xiphophorus_couchianus
ENSORLG00000000676	thumpd3	99	77.419	ENSXMAG00000001423	thumpd3	99	77.419	Xiphophorus_maculatus