EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSORLG00000000707 (Gene tree)
Gene ID
101172811
Gene Symbol
csde1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
21135 bases
Position
chr7:1560391-1581525
Accession
101172811
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000000878CSDPF00313.221.5e-8015
ENSORLP00000000878CSDPF00313.221.5e-8025
ENSORLP00000000878CSDPF00313.221.5e-8035
ENSORLP00000000878CSDPF00313.221.5e-8045
ENSORLP00000000878CSDPF00313.221.5e-8055
ENSORLP00000029421CSDPF00313.223e-8015
ENSORLP00000029421CSDPF00313.223e-8025
ENSORLP00000029421CSDPF00313.223e-8035
ENSORLP00000029421CSDPF00313.223e-8045
ENSORLP00000029421CSDPF00313.223e-8055
ENSORLP00000038466CSDPF00313.223e-8015
ENSORLP00000038466CSDPF00313.223e-8025
ENSORLP00000038466CSDPF00313.223e-8035
ENSORLP00000038466CSDPF00313.223e-8045
ENSORLP00000038466CSDPF00313.223e-8055
ENSORLP00000034821CSDPF00313.225.5e-8015
ENSORLP00000034821CSDPF00313.225.5e-8025
ENSORLP00000034821CSDPF00313.225.5e-8035
ENSORLP00000034821CSDPF00313.225.5e-8045
ENSORLP00000034821CSDPF00313.225.5e-8055
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000029886-4254XM_011476685ENSORLP00000029421816 (aa)XP_011474987-
ENSORLT00000028775-7644XM_011476677ENSORLP00000034821875 (aa)XP_011474979UPI0009DB65CE
ENSORLT00000000879-2301-ENSORLP00000000878766 (aa)-H2L521
ENSORLT00000036280-7549-ENSORLP00000038466816 (aa)--
Gene Model
Click here to download ENSORLG00000000707's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000707's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000000707csde110077.503ENSG00000009307CSDE110084.559Homo_sapiens
ENSORLG00000000707csde110091.422ENSAPOG00000015538csde110091.146Acanthochromis_polyacanthus
ENSORLG00000000707csde110076.723ENSAMEG00000017129CSDE19476.723Ailuropoda_melanoleuca
ENSORLG00000000707csde18891.351ENSACIG00000015175csde110091.351Amphilophus_citrinellus
ENSORLG00000000707csde110091.176ENSAOCG00000011510csde110090.885Amphiprion_ocellaris
ENSORLG00000000707csde110091.299ENSAPEG00000007194csde110091.299Amphiprion_percula
ENSORLG00000000707csde110090.637ENSATEG00000003864csde110090.637Anabas_testudineus
ENSORLG00000000707csde110079.688ENSAPLG00000008797CSDE110079.688Anas_platyrhynchos
ENSORLG00000000707csde110077.262ENSACAG00000003120CSDE110077.262Anolis_carolinensis
ENSORLG00000000707csde19061.837ENSANAG00000028396-9362.712Aotus_nancymaae
ENSORLG00000000707csde110077.373ENSANAG00000024665CSDE19577.373Aotus_nancymaae
ENSORLG00000000707csde110091.678ENSACLG00000013296csde110091.678Astatotilapia_calliptera
ENSORLG00000000707csde110084.047ENSAMXG00000007436csde110084.047Astyanax_mexicanus
ENSORLG00000000707csde110077.763ENSBTAG00000000678CSDE110077.763Bos_taurus
ENSORLG00000000707csde110077.373ENSCJAG00000012565CSDE19477.373Callithrix_jacchus
ENSORLG00000000707csde19877.955ENSCAFG00000009618CSDE19477.955Canis_familiaris
ENSORLG00000000707csde110077.763ENSCAFG00020000481CSDE110077.763Canis_lupus_dingo
ENSORLG00000000707csde110077.633ENSCHIG00000017250CSDE110077.633Capra_hircus
ENSORLG00000000707csde110077.763ENSTSYG00000003747CSDE110077.763Carlito_syrichta
ENSORLG00000000707csde110069.231ENSCAPG00000015128CSDE110069.231Cavia_aperea
ENSORLG00000000707csde110071.934ENSCPOG00000040388CSDE110071.934Cavia_porcellus
ENSORLG00000000707csde19755.333ENSCCAG00000030878-9954.605Cebus_capucinus
ENSORLG00000000707csde19557.346ENSCCAG00000033677-9957.346Cebus_capucinus
ENSORLG00000000707csde110077.373ENSCCAG00000036794CSDE110075.092Cebus_capucinus
ENSORLG00000000707csde110077.503ENSCATG00000036962CSDE19777.503Cercocebus_atys
ENSORLG00000000707csde110077.633ENSCLAG00000006618CSDE110077.633Chinchilla_lanigera
ENSORLG00000000707csde110075.214ENSCSAG00000001658CSDE19773.770Chlorocebus_sabaeus
ENSORLG00000000707csde110082.524ENSCHOG00000000918CSDE18582.524Choloepus_hoffmanni
ENSORLG00000000707csde110079.688ENSCPBG00000016547CSDE110079.688Chrysemys_picta_bellii
ENSORLG00000000707csde19842.926ENSCING00000014465-9642.926Ciona_intestinalis
ENSORLG00000000707csde19741.646ENSCSAVG00000008100-10040.859Ciona_savignyi
ENSORLG00000000707csde110077.503ENSCANG00000035096CSDE19777.503Colobus_angolensis_palliatus
ENSORLG00000000707csde18879.323ENSCANG00000031069-9478.889Colobus_angolensis_palliatus
ENSORLG00000000707csde110063.329ENSCGRG00001014011-10063.329Cricetulus_griseus_chok1gshd
ENSORLG00000000707csde110076.983ENSCGRG00001016833-10076.983Cricetulus_griseus_chok1gshd
ENSORLG00000000707csde110073.043ENSCGRG00000005831-10073.043Cricetulus_griseus_crigri
ENSORLG00000000707csde19773.556ENSCGRG00000002225-10073.778Cricetulus_griseus_crigri
ENSORLG00000000707csde110089.857ENSCSEG00000002620csde110089.857Cynoglossus_semilaevis
ENSORLG00000000707csde110090.507ENSCVAG00000001344csde110090.507Cyprinodon_variegatus
ENSORLG00000000707csde110085.452ENSDARG00000074758csde110088.129Danio_rerio
ENSORLG00000000707csde16252.471ENSDNOG00000034464-9956.489Dasypus_novemcinctus
ENSORLG00000000707csde110077.922ENSDNOG00000010287-9377.922Dasypus_novemcinctus
ENSORLG00000000707csde110074.847ENSDORG00000011609Csde110076.269Dipodomys_ordii
ENSORLG00000000707csde19947.746FBgn0263352Unr8347.106Drosophila_melanogaster
ENSORLG00000000707csde19960.626ENSETEG00000013678-9960.626Echinops_telfairi
ENSORLG00000000707csde17953.795ENSETEG00000007109-9953.795Echinops_telfairi
ENSORLG00000000707csde19068.770ENSETEG00000006280-10068.770Echinops_telfairi
ENSORLG00000000707csde110081.481ENSETEG00000002491-8572.046Echinops_telfairi
ENSORLG00000000707csde19954.152ENSEBUG00000008647csde19952.509Eptatretus_burgeri
ENSORLG00000000707csde110077.893ENSEASG00005006284CSDE110075.580Equus_asinus_asinus
ENSORLG00000000707csde110077.893ENSECAG00000020885CSDE19977.871Equus_caballus
ENSORLG00000000707csde19381.250ENSEEUG00000006286CSDE16881.250Erinaceus_europaeus
ENSORLG00000000707csde110086.441ENSELUG00000015507csde110085.382Esox_lucius
ENSORLG00000000707csde110077.763ENSFCAG00000029266CSDE110077.763Felis_catus
ENSORLG00000000707csde110076.895ENSFALG00000003407CSDE110076.895Ficedula_albicollis
ENSORLG00000000707csde19976.126ENSFDAG00000007882CSDE110076.119Fukomys_damarensis
ENSORLG00000000707csde19890.596ENSFHEG00000010799csde19990.596Fundulus_heteroclitus
ENSORLG00000000707csde19984.700ENSGMOG00000012731csde110084.700Gadus_morhua
ENSORLG00000000707csde19877.210ENSGALG00000002139CSDE19877.210Gallus_gallus
ENSORLG00000000707csde19490.687ENSGAFG00000005241csde19590.687Gambusia_affinis
ENSORLG00000000707csde19988.235ENSGACG00000004544csde110088.235Gasterosteus_aculeatus
ENSORLG00000000707csde110079.688ENSGAGG00000017685CSDE110077.262Gopherus_agassizii
ENSORLG00000000707csde110077.503ENSGGOG00000002164CSDE110077.503Gorilla_gorilla
ENSORLG00000000707csde110091.922ENSHBUG00000020315csde110091.678Haplochromis_burtoni
ENSORLG00000000707csde19960.391ENSHGLG00000000650-9960.391Heterocephalus_glaber_female
ENSORLG00000000707csde19766.000ENSHGLG00000010039-10066.222Heterocephalus_glaber_female
ENSORLG00000000707csde110070.665ENSHGLG00000009620-10070.795Heterocephalus_glaber_female
ENSORLG00000000707csde19767.718ENSHGLG00000008555-10067.761Heterocephalus_glaber_female
ENSORLG00000000707csde19967.104ENSHGLG00000007471-9867.104Heterocephalus_glaber_female
ENSORLG00000000707csde110069.051ENSHGLG00000003829-10069.051Heterocephalus_glaber_female
ENSORLG00000000707csde110063.098ENSHGLG00000019549-10063.098Heterocephalus_glaber_female
ENSORLG00000000707csde19765.778ENSHGLG00100006910-10066.000Heterocephalus_glaber_male
ENSORLG00000000707csde19963.659ENSHGLG00100002245-9963.659Heterocephalus_glaber_male
ENSORLG00000000707csde19965.450ENSHGLG00100007287-9865.450Heterocephalus_glaber_male
ENSORLG00000000707csde110063.377ENSHGLG00100001846-10063.377Heterocephalus_glaber_male
ENSORLG00000000707csde110077.243ENSHGLG00100019438-10077.243Heterocephalus_glaber_male
ENSORLG00000000707csde110064.889ENSHGLG00100012072-10064.889Heterocephalus_glaber_male
ENSORLG00000000707csde19365.320ENSHGLG00100004195-10065.320Heterocephalus_glaber_male
ENSORLG00000000707csde19760.938ENSHGLG00100004833-10060.938Heterocephalus_glaber_male
ENSORLG00000000707csde110088.947ENSHCOG00000004158csde110088.947Hippocampus_comes
ENSORLG00000000707csde110084.047ENSIPUG00000000355csde110084.047Ictalurus_punctatus
ENSORLG00000000707csde19356.492ENSSTOG00000032722-9956.492Ictidomys_tridecemlineatus
ENSORLG00000000707csde110063.857ENSSTOG00000030994-10063.857Ictidomys_tridecemlineatus
ENSORLG00000000707csde110074.969ENSJJAG00000019571Csde110076.418Jaculus_jaculus
ENSORLG00000000707csde110088.794ENSKMAG00000005685csde110088.364Kryptolebias_marmoratus
ENSORLG00000000707csde110091.187ENSLBEG00000014770csde110091.027Labrus_bergylta
ENSORLG00000000707csde110073.341ENSLACG00000018452CSDE19970.829Latimeria_chalumnae
ENSORLG00000000707csde110082.353ENSLOCG00000010413csde19881.125Lepisosteus_oculatus
ENSORLG00000000707csde110077.373ENSLAFG00000007150CSDE19677.373Loxodonta_africana
ENSORLG00000000707csde110077.503ENSMFAG00000003674CSDE110077.503Macaca_fascicularis
ENSORLG00000000707csde110077.503ENSMMUG00000001974CSDE110077.503Macaca_mulatta
ENSORLG00000000707csde110077.503ENSMNEG00000045247CSDE19777.503Macaca_nemestrina
ENSORLG00000000707csde110077.243ENSMLEG00000038673CSDE19477.243Mandrillus_leucophaeus
ENSORLG00000000707csde110091.544ENSMAMG00000008821csde110091.536Mastacembelus_armatus
ENSORLG00000000707csde110091.678ENSMZEG00005021675csde110091.678Maylandia_zebra
ENSORLG00000000707csde110079.454ENSMGAG00000016381CSDE110079.454Meleagris_gallopavo
ENSORLG00000000707csde110074.725ENSMAUG00000014031Csde110076.119Mesocricetus_auratus
ENSORLG00000000707csde110077.633ENSMICG00000002050CSDE19677.575Microcebus_murinus
ENSORLG00000000707csde110076.983ENSMOCG00000018960Csde110076.983Microtus_ochrogaster
ENSORLG00000000707csde110091.678ENSMMOG00000015075csde110091.678Mola_mola
ENSORLG00000000707csde110077.951ENSMODG00000004685CSDE110076.313Monodelphis_domestica
ENSORLG00000000707csde110091.547ENSMALG00000007132csde110091.547Monopterus_albus
ENSORLG00000000707csde110076.853MGP_CAROLIEiJ_G0025444Csde110089.216Mus_caroli
ENSORLG00000000707csde110077.113ENSMUSG00000068823Csde19989.216Mus_musculus
ENSORLG00000000707csde110077.113MGP_PahariEiJ_G0026888Csde110089.216Mus_pahari
ENSORLG00000000707csde110077.113MGP_SPRETEiJ_G0026394Csde110089.216Mus_spretus
ENSORLG00000000707csde19875.592ENSMPUG00000005753CSDE19975.592Mustela_putorius_furo
ENSORLG00000000707csde110077.243ENSMLUG00000005681CSDE19477.243Myotis_lucifugus
ENSORLG00000000707csde110074.603ENSNGAG00000021929Csde110075.970Nannospalax_galili
ENSORLG00000000707csde19652.889ENSNGAG00000012599-10052.889Nannospalax_galili
ENSORLG00000000707csde110091.678ENSNBRG00000020808csde110091.678Neolamprologus_brichardi
ENSORLG00000000707csde110077.503ENSNLEG00000004842CSDE19777.503Nomascus_leucogenys
ENSORLG00000000707csde19882.524ENSMEUG00000002677CSDE19582.524Notamacropus_eugenii
ENSORLG00000000707csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSORLG00000000707csde19976.126ENSODEG00000007383-10076.119Octodon_degus
ENSORLG00000000707csde19752.759ENSODEG00000005979-9852.993Octodon_degus
ENSORLG00000000707csde110091.799ENSONIG00000009309csde110091.799Oreochromis_niloticus
ENSORLG00000000707csde110079.661ENSOANG00000003346-8379.661Ornithorhynchus_anatinus
ENSORLG00000000707csde110077.243ENSOCUG00000016438CSDE19973.095Oryctolagus_cuniculus
ENSORLG00000000707csde110099.632ENSORLG00020005148csde110099.632Oryzias_latipes_hni
ENSORLG00000000707csde110099.632ENSORLG00015019415csde110099.632Oryzias_latipes_hsok
ENSORLG00000000707csde110096.736ENSOMEG00000015656csde110096.736Oryzias_melastigma
ENSORLG00000000707csde110077.633ENSOGAG00000012127CSDE19477.633Otolemur_garnettii
ENSORLG00000000707csde110077.633ENSOARG00000020034CSDE19477.633Ovis_aries
ENSORLG00000000707csde110077.503ENSPPAG00000025861CSDE110077.503Pan_paniscus
ENSORLG00000000707csde110077.763ENSPPRG00000006747CSDE19477.763Panthera_pardus
ENSORLG00000000707csde110077.763ENSPTIG00000015468CSDE110075.458Panthera_tigris_altaica
ENSORLG00000000707csde110077.503ENSPTRG00000033721CSDE110075.214Pan_troglodytes
ENSORLG00000000707csde110077.503ENSPANG00000018873CSDE110077.503Papio_anubis
ENSORLG00000000707csde110084.245ENSPKIG00000009459csde110084.245Paramormyrops_kingsleyae
ENSORLG00000000707csde19677.707ENSPSIG00000003823CSDE19975.764Pelodiscus_sinensis
ENSORLG00000000707csde110088.557ENSPMGG00000000772csde110088.557Periophthalmus_magnuspinnatus
ENSORLG00000000707csde110074.969ENSPEMG00000020357-10076.418Peromyscus_maniculatus_bairdii
ENSORLG00000000707csde110076.435ENSPCIG00000022587CSDE110076.435Phascolarctos_cinereus
ENSORLG00000000707csde19788.647ENSPFOG00000012664csde110088.958Poecilia_formosa
ENSORLG00000000707csde19583.871ENSPLAG00000017680csde19383.871Poecilia_latipinna
ENSORLG00000000707csde19584.332ENSPMEG00000005094csde19584.332Poecilia_mexicana
ENSORLG00000000707csde110088.795ENSPREG00000011631csde110089.036Poecilia_reticulata
ENSORLG00000000707csde110075.092ENSPPYG00000000996CSDE110075.092Pongo_abelii
ENSORLG00000000707csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSORLG00000000707csde18869.888ENSPCOG00000008223-9269.888Propithecus_coquereli
ENSORLG00000000707csde110077.763ENSPCOG00000017893CSDE110077.763Propithecus_coquereli
ENSORLG00000000707csde110072.432ENSPVAG00000008225CSDE19572.432Pteropus_vampyrus
ENSORLG00000000707csde110091.678ENSPNYG00000013745csde110091.678Pundamilia_nyererei
ENSORLG00000000707csde110084.935ENSPNAG00000001958csde110084.935Pygocentrus_nattereri
ENSORLG00000000707csde110074.725ENSRNOG00000061058Csde110074.725Rattus_norvegicus
ENSORLG00000000707csde110074.545ENSRBIG00000038088-10074.545Rhinopithecus_bieti
ENSORLG00000000707csde110073.022ENSRBIG00000038966-9473.022Rhinopithecus_bieti
ENSORLG00000000707csde110077.503ENSRROG00000043101CSDE19777.503Rhinopithecus_roxellana
ENSORLG00000000707csde110077.373ENSSBOG00000035592CSDE19577.373Saimiri_boliviensis_boliviensis
ENSORLG00000000707csde110078.804ENSSHAG00000009831CSDE110078.804Sarcophilus_harrisii
ENSORLG00000000707csde110083.896ENSSFOG00015007498csde110083.896Scleropages_formosus
ENSORLG00000000707csde110092.188ENSSMAG00000007203csde110092.188Scophthalmus_maximus
ENSORLG00000000707csde110091.667ENSSDUG00000015380csde110091.667Seriola_dumerili
ENSORLG00000000707csde110091.667ENSSLDG00000008819csde110091.667Seriola_lalandi_dorsalis
ENSORLG00000000707csde110077.373ENSSARG00000000738CSDE19477.373Sorex_araneus
ENSORLG00000000707csde110079.688ENSSPUG00000008714CSDE110079.688Sphenodon_punctatus
ENSORLG00000000707csde110091.536ENSSPAG00000000716csde110091.536Stegastes_partitus
ENSORLG00000000707csde110077.893ENSSSCG00000006752CSDE110077.893Sus_scrofa
ENSORLG00000000707csde110075.976ENSTGUG00000000972CSDE110075.976Taeniopygia_guttata
ENSORLG00000000707csde110085.156ENSTRUG00000007996csde110085.156Takifugu_rubripes
ENSORLG00000000707csde19380.843ENSTNIG00000010878csde110084.286Tetraodon_nigroviridis
ENSORLG00000000707csde18181.595ENSTBEG00000011880-6081.595Tupaia_belangeri
ENSORLG00000000707csde110077.243ENSTTRG00000015583CSDE19477.243Tursiops_truncatus
ENSORLG00000000707csde19281.433ENSUAMG00000021779-9981.029Ursus_americanus
ENSORLG00000000707csde18773.515ENSUAMG00000024289-9973.515Ursus_americanus
ENSORLG00000000707csde19772.986ENSUMAG00000011714-9973.223Ursus_maritimus
ENSORLG00000000707csde110071.391ENSUMAG00000009720-9771.391Ursus_maritimus
ENSORLG00000000707csde110080.420ENSVPAG00000000749CSDE17980.420Vicugna_pacos
ENSORLG00000000707csde19374.184ENSVVUG00000009890CSDE19474.184Vulpes_vulpes
ENSORLG00000000707csde110075.669ENSXETG00000021448csde110075.669Xenopus_tropicalis
ENSORLG00000000707csde19492.810ENSXCOG00000000035csde19984.024Xiphophorus_couchianus
ENSORLG00000000707csde110089.890ENSXMAG00000009080csde110090.134Xiphophorus_maculatus

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