EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000000746 (Gene tree)
Gene ID: 101155211
Gene Symbol: srsf7a
Alias: -
Full Name: serine/arginine-rich splicing factor 7
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4175 bases
Position: chr13:2657855-2662029
Accession: 101155211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000000915	RRM_1	PF00076.22	9.9e-16	1	1
ENSORLP00000000917	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000000916	-	1173	XM_004075211	ENSORLP00000000915	251 (aa)	XP_004075259	H2L550
ENSORLT00000000918	-	1251	XM_011482198	ENSORLP00000000917	265 (aa)	XP_011480500	H2L552

Gene Model

Click here to download ENSORLG00000000746's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG
ola05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000746	srsf7a	65	39.264	ENSATEG00000006193	srsf3b	52	78.205	Anabas_testudineus
ENSORLG00000000746	srsf7a	53	93.182	ENSCSEG00000006378	srsf7a	82	96.522	Cynoglossus_semilaevis
ENSORLG00000000746	srsf7a	60	54.000	ENSCSEG00000002271	srsf3b	59	78.205	Cynoglossus_semilaevis
ENSORLG00000000746	srsf7a	94	62.109	ENSDARG00000035325	srsf7a	85	95.161	Danio_rerio
ENSORLG00000000746	srsf7a	74	56.915	ENSELUG00000018155	srsf7b	83	73.913	Esox_lucius
ENSORLG00000000746	srsf7a	51	92.248	ENSFHEG00000007159	srsf7a	63	95.652	Fundulus_heteroclitus
ENSORLG00000000746	srsf7a	50	67.717	ENSGAFG00000008856	srsf7b	84	70.085	Gambusia_affinis
ENSORLG00000000746	srsf7a	62	39.264	ENSIPUG00000017382	srsf3	61	78.205	Ictalurus_punctatus
ENSORLG00000000746	srsf7a	51	59.690	ENSJJAG00000020230	-	71	62.609	Jaculus_jaculus
ENSORLG00000000746	srsf7a	69	62.703	ENSLACG00000018688	srsf7a	56	85.345	Latimeria_chalumnae
ENSORLG00000000746	srsf7a	55	65.957	ENSMAMG00000017138	srsf7b	50	73.913	Mastacembelus_armatus
ENSORLG00000000746	srsf7a	68	46.199	ENSMAUG00000011430	-	54	61.446	Mesocricetus_auratus
ENSORLG00000000746	srsf7a	57	51.370	ENSMAUG00000021932	-	57	59.130	Mesocricetus_auratus
ENSORLG00000000746	srsf7a	50	94.400	ENSMMOG00000005208	srsf7a	76	96.522	Mola_mola
ENSORLG00000000746	srsf7a	51	70.000	ENSMEUG00000000773	-	59	75.221	Notamacropus_eugenii
ENSORLG00000000746	srsf7a	100	99.623	ENSORLG00020020654	srsf7a	100	99.623	Oryzias_latipes_hni
ENSORLG00000000746	srsf7a	100	98.868	ENSORLG00015009569	srsf7a	100	98.868	Oryzias_latipes_hsok
ENSORLG00000000746	srsf7a	60	54.000	ENSOMEG00000014893	srsf3b	52	78.205	Oryzias_melastigma
ENSORLG00000000746	srsf7a	72	52.717	ENSPCIG00000020694	-	84	74.783	Phascolarctos_cinereus
ENSORLG00000000746	srsf7a	52	50.000	ENSPREG00000002610	-	51	78.205	Poecilia_reticulata
ENSORLG00000000746	srsf7a	52	69.925	ENSSDUG00000021338	srsf7b	80	74.783	Seriola_dumerili
ENSORLG00000000746	srsf7a	52	46.923	ENSTRUG00000024882	srsf3b	53	72.289	Takifugu_rubripes
ENSORLG00000000746	srsf7a	52	48.462	ENSTNIG00000014643	srsf3b	70	50.355	Tetraodon_nigroviridis
ENSORLG00000000746	srsf7a	52	53.731	ENSVVUG00000006092	-	69	63.889	Vulpes_vulpes