EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000000824 (Gene tree)
Gene ID: 101161076
Gene Symbol: larp1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 49711 bases
Position: chr14:3431697-3481407
Accession: 101161076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001011	La	PF05383.17	9.1e-22	1	1
ENSORLP00000037448	La	PF05383.17	1.3e-21	1	1
ENSORLP00000029537	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000033740	-	6852	XM_023962691	ENSORLP00000029537	1084 (aa)	XP_023818459	UPI0009DB6629
ENSORLT00000001012	-	2439	-	ENSORLP00000001011	812 (aa)	-	H2L5E2
ENSORLT00000042537	-	6780	XM_023962692	ENSORLP00000037448	1060 (aa)	XP_023818460	UPI0009D93701

Gene Model

Click here to download ENSORLG00000000824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000000824	larp1	83	61.158	ENSORLG00000017954	larp1b	89	53.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000824	larp1	96	71.306	ENSG00000155506	LARP1	95	75.843	Homo_sapiens
ENSORLG00000000824	larp1	89	88.000	ENSAPOG00000020685	larp1	99	88.000	Acanthochromis_polyacanthus
ENSORLG00000000824	larp1	96	71.917	ENSAMEG00000016673	LARP1	96	68.584	Ailuropoda_melanoleuca
ENSORLG00000000824	larp1	100	79.976	ENSACIG00000012994	larp1	100	74.191	Amphilophus_citrinellus
ENSORLG00000000824	larp1	99	84.291	ENSAOCG00000007792	larp1	100	88.994	Amphiprion_ocellaris
ENSORLG00000000824	larp1	100	86.820	ENSAPEG00000022246	larp1	100	86.262	Amphiprion_percula
ENSORLG00000000824	larp1	97	84.314	ENSATEG00000013523	larp1	100	84.277	Anabas_testudineus
ENSORLG00000000824	larp1	92	75.129	ENSAPLG00000007559	LARP1	99	71.460	Anas_platyrhynchos
ENSORLG00000000824	larp1	99	72.825	ENSACAG00000004071	LARP1	97	71.445	Anolis_carolinensis
ENSORLG00000000824	larp1	96	71.306	ENSANAG00000029949	LARP1	96	65.470	Aotus_nancymaae
ENSORLG00000000824	larp1	100	84.312	ENSACLG00000015256	larp1	100	87.080	Astatotilapia_calliptera
ENSORLG00000000824	larp1	98	81.273	ENSAMXG00000000859	larp1	99	75.118	Astyanax_mexicanus
ENSORLG00000000824	larp1	96	72.059	ENSBTAG00000008443	LARP1	97	63.653	Bos_taurus
ENSORLG00000000824	larp1	96	71.603	ENSCJAG00000004454	LARP1	97	63.586	Callithrix_jacchus
ENSORLG00000000824	larp1	96	72.039	ENSCAFG00000017639	LARP1	96	68.584	Canis_familiaris
ENSORLG00000000824	larp1	96	72.039	ENSCAFG00020023860	LARP1	95	70.046	Canis_lupus_dingo
ENSORLG00000000824	larp1	96	71.814	ENSCHIG00000014414	LARP1	99	61.241	Capra_hircus
ENSORLG00000000824	larp1	98	70.665	ENSTSYG00000013732	LARP1	98	64.865	Carlito_syrichta
ENSORLG00000000824	larp1	92	69.898	ENSCAPG00000013865	LARP1	85	65.217	Cavia_aperea
ENSORLG00000000824	larp1	96	71.864	ENSCPOG00000003377	LARP1	96	68.517	Cavia_porcellus
ENSORLG00000000824	larp1	96	71.429	ENSCCAG00000025201	LARP1	97	63.401	Cebus_capucinus
ENSORLG00000000824	larp1	96	71.691	ENSCATG00000030675	LARP1	90	68.376	Cercocebus_atys
ENSORLG00000000824	larp1	96	71.742	ENSCLAG00000012755	LARP1	96	66.844	Chinchilla_lanigera
ENSORLG00000000824	larp1	96	68.957	ENSCSAG00000010800	LARP1	95	67.245	Chlorocebus_sabaeus
ENSORLG00000000824	larp1	81	66.265	ENSCHOG00000012716	LARP1	88	65.230	Choloepus_hoffmanni
ENSORLG00000000824	larp1	96	76.131	ENSCPBG00000002173	LARP1	93	71.730	Chrysemys_picta_bellii
ENSORLG00000000824	larp1	96	71.814	ENSCANG00000037418	LARP1	90	68.803	Colobus_angolensis_palliatus
ENSORLG00000000824	larp1	98	70.581	ENSCGRG00001016913	Larp1	97	64.033	Cricetulus_griseus_chok1gshd
ENSORLG00000000824	larp1	96	67.442	ENSCGRG00000009916	Larp1	100	64.957	Cricetulus_griseus_crigri
ENSORLG00000000824	larp1	100	83.560	ENSCSEG00000016431	larp1	100	83.380	Cynoglossus_semilaevis
ENSORLG00000000824	larp1	97	84.428	ENSCVAG00000022687	larp1	100	83.164	Cyprinodon_variegatus
ENSORLG00000000824	larp1	99	75.971	ENSDARG00000101722	larp1	99	68.897	Danio_rerio
ENSORLG00000000824	larp1	98	69.477	ENSDNOG00000012073	LARP1	97	63.343	Dasypus_novemcinctus
ENSORLG00000000824	larp1	98	66.746	ENSDORG00000002897	Larp1	96	65.466	Dipodomys_ordii
ENSORLG00000000824	larp1	92	71.610	ENSETEG00000020251	LARP1	100	66.815	Echinops_telfairi
ENSORLG00000000824	larp1	96	71.864	ENSEASG00005001070	LARP1	97	63.477	Equus_asinus_asinus
ENSORLG00000000824	larp1	96	71.864	ENSECAG00000017002	LARP1	78	63.619	Equus_caballus
ENSORLG00000000824	larp1	96	67.604	ENSEEUG00000001065	LARP1	96	65.502	Erinaceus_europaeus
ENSORLG00000000824	larp1	99	78.092	ENSELUG00000019403	larp1	99	75.623	Esox_lucius
ENSORLG00000000824	larp1	96	72.107	ENSFCAG00000000592	LARP1	97	63.787	Felis_catus
ENSORLG00000000824	larp1	98	74.024	ENSFALG00000008335	LARP1	99	71.951	Ficedula_albicollis
ENSORLG00000000824	larp1	96	71.829	ENSFDAG00000021125	LARP1	96	68.697	Fukomys_damarensis
ENSORLG00000000824	larp1	63	76.453	ENSFHEG00000020307	larp1	92	81.790	Fundulus_heteroclitus
ENSORLG00000000824	larp1	99	74.541	ENSGALG00000040109	LARP1	97	69.430	Gallus_gallus
ENSORLG00000000824	larp1	96	76.005	ENSGAGG00000025113	LARP1	97	72.222	Gopherus_agassizii
ENSORLG00000000824	larp1	96	71.306	ENSGGOG00000006048	LARP1	90	68.303	Gorilla_gorilla
ENSORLG00000000824	larp1	100	84.700	ENSHBUG00000020762	larp1	100	87.526	Haplochromis_burtoni
ENSORLG00000000824	larp1	96	71.255	ENSHGLG00000006267	LARP1	97	62.696	Heterocephalus_glaber_female
ENSORLG00000000824	larp1	96	61.491	ENSHGLG00100003395	-	88	58.552	Heterocephalus_glaber_male
ENSORLG00000000824	larp1	98	69.976	ENSHGLG00100014230	-	96	68.410	Heterocephalus_glaber_male
ENSORLG00000000824	larp1	87	91.816	ENSHCOG00000010786	larp1	98	88.998	Hippocampus_comes
ENSORLG00000000824	larp1	97	77.722	ENSIPUG00000019105	Larp1	96	76.780	Ictalurus_punctatus
ENSORLG00000000824	larp1	96	68.902	ENSSTOG00000005678	LARP1	95	66.132	Ictidomys_tridecemlineatus
ENSORLG00000000824	larp1	96	67.897	ENSJJAG00000016950	Larp1	97	60.668	Jaculus_jaculus
ENSORLG00000000824	larp1	100	83.796	ENSKMAG00000018468	larp1	99	87.423	Kryptolebias_marmoratus
ENSORLG00000000824	larp1	98	86.347	ENSLBEG00000027172	larp1	100	82.178	Labrus_bergylta
ENSORLG00000000824	larp1	93	80.859	ENSLOCG00000012457	larp1	99	74.975	Lepisosteus_oculatus
ENSORLG00000000824	larp1	96	70.732	ENSLAFG00000008991	LARP1	97	63.090	Loxodonta_africana
ENSORLG00000000824	larp1	96	71.691	ENSMFAG00000031651	LARP1	90	68.269	Macaca_fascicularis
ENSORLG00000000824	larp1	96	68.589	ENSMMUG00000009411	LARP1	96	65.809	Macaca_mulatta
ENSORLG00000000824	larp1	96	71.691	ENSMNEG00000039294	LARP1	95	69.711	Macaca_nemestrina
ENSORLG00000000824	larp1	96	71.814	ENSMLEG00000035142	LARP1	90	68.483	Mandrillus_leucophaeus
ENSORLG00000000824	larp1	100	86.128	ENSMAMG00000021788	larp1	100	85.009	Mastacembelus_armatus
ENSORLG00000000824	larp1	100	84.312	ENSMZEG00005009345	larp1	100	87.080	Maylandia_zebra
ENSORLG00000000824	larp1	99	73.197	ENSMGAG00000005696	LARP1	99	69.078	Meleagris_gallopavo
ENSORLG00000000824	larp1	98	70.581	ENSMAUG00000001385	Larp1	99	63.239	Mesocricetus_auratus
ENSORLG00000000824	larp1	96	71.585	ENSMICG00000000837	LARP1	95	69.781	Microcebus_murinus
ENSORLG00000000824	larp1	98	70.463	ENSMOCG00000008920	Larp1	99	63.148	Microtus_ochrogaster
ENSORLG00000000824	larp1	95	63.203	ENSMMOG00000013364	larp1	99	64.728	Mola_mola
ENSORLG00000000824	larp1	98	70.539	ENSMODG00000008663	LARP1	98	67.913	Monodelphis_domestica
ENSORLG00000000824	larp1	100	83.061	ENSMALG00000017180	larp1	100	83.000	Monopterus_albus
ENSORLG00000000824	larp1	98	70.463	MGP_CAROLIEiJ_G0016383	Larp1	99	62.940	Mus_caroli
ENSORLG00000000824	larp1	98	70.581	ENSMUSG00000037331	Larp1	99	63.455	Mus_musculus
ENSORLG00000000824	larp1	98	70.581	MGP_PahariEiJ_G0017518	Larp1	99	63.306	Mus_pahari
ENSORLG00000000824	larp1	98	70.581	MGP_SPRETEiJ_G0017225	Larp1	99	63.364	Mus_spretus
ENSORLG00000000824	larp1	76	69.313	ENSMPUG00000013564	LARP1	99	60.130	Mustela_putorius_furo
ENSORLG00000000824	larp1	98	66.706	ENSMLUG00000002608	LARP1	99	64.124	Myotis_lucifugus
ENSORLG00000000824	larp1	98	67.815	ENSNGAG00000001098	Larp1	96	66.100	Nannospalax_galili
ENSORLG00000000824	larp1	96	85.553	ENSNBRG00000008963	larp1	97	84.734	Neolamprologus_brichardi
ENSORLG00000000824	larp1	96	69.902	ENSNLEG00000016588	LARP1	95	66.450	Nomascus_leucogenys
ENSORLG00000000824	larp1	98	69.315	ENSMEUG00000002957	LARP1	99	64.405	Notamacropus_eugenii
ENSORLG00000000824	larp1	96	72.039	ENSOPRG00000013014	LARP1	96	68.730	Ochotona_princeps
ENSORLG00000000824	larp1	96	71.795	ENSODEG00000010824	LARP1	96	68.196	Octodon_degus
ENSORLG00000000824	larp1	99	83.412	ENSONIG00000017308	larp1	100	81.000	Oreochromis_niloticus
ENSORLG00000000824	larp1	99	71.462	ENSOANG00000005096	LARP1	98	68.937	Ornithorhynchus_anatinus
ENSORLG00000000824	larp1	96	71.376	ENSOCUG00000013066	LARP1	97	63.645	Oryctolagus_cuniculus
ENSORLG00000000824	larp1	100	99.170	ENSORLG00020022241	larp1	100	99.170	Oryzias_latipes_hni
ENSORLG00000000824	larp1	100	99.077	ENSORLG00015007538	larp1	100	99.077	Oryzias_latipes_hsok
ENSORLG00000000824	larp1	100	92.541	ENSOMEG00000003134	larp1	100	93.370	Oryzias_melastigma
ENSORLG00000000824	larp1	98	69.858	ENSOGAG00000016750	LARP1	99	67.012	Otolemur_garnettii
ENSORLG00000000824	larp1	96	70.184	ENSOARG00000009893	LARP1	99	65.400	Ovis_aries
ENSORLG00000000824	larp1	96	71.306	ENSPPAG00000042993	LARP1	90	68.303	Pan_paniscus
ENSORLG00000000824	larp1	96	70.352	ENSPPRG00000009780	LARP1	91	66.702	Panthera_pardus
ENSORLG00000000824	larp1	96	70.732	ENSPTIG00000007013	LARP1	91	67.128	Panthera_tigris_altaica
ENSORLG00000000824	larp1	96	71.306	ENSPTRG00000017447	LARP1	90	68.303	Pan_troglodytes
ENSORLG00000000824	larp1	96	71.691	ENSPANG00000008080	LARP1	90	68.376	Papio_anubis
ENSORLG00000000824	larp1	99	78.853	ENSPKIG00000010096	larp1	99	74.791	Paramormyrops_kingsleyae
ENSORLG00000000824	larp1	99	71.689	ENSPKIG00000017153	-	99	68.307	Paramormyrops_kingsleyae
ENSORLG00000000824	larp1	93	82.987	ENSPMGG00000011599	larp1	97	78.239	Periophthalmus_magnuspinnatus
ENSORLG00000000824	larp1	98	67.299	ENSPEMG00000022523	Larp1	98	64.938	Peromyscus_maniculatus_bairdii
ENSORLG00000000824	larp1	96	72.444	ENSPCIG00000019242	LARP1	90	64.585	Phascolarctos_cinereus
ENSORLG00000000824	larp1	100	81.267	ENSPFOG00000005836	larp1	100	81.176	Poecilia_formosa
ENSORLG00000000824	larp1	100	81.314	ENSPLAG00000008936	larp1	100	81.406	Poecilia_latipinna
ENSORLG00000000824	larp1	100	81.267	ENSPMEG00000013656	larp1	100	81.176	Poecilia_mexicana
ENSORLG00000000824	larp1	100	80.257	ENSPREG00000005726	larp1	99	84.687	Poecilia_reticulata
ENSORLG00000000824	larp1	96	69.080	ENSPCAG00000006407	LARP1	97	66.275	Procavia_capensis
ENSORLG00000000824	larp1	96	62.728	ENSPCOG00000016949	LARP1	96	63.501	Propithecus_coquereli
ENSORLG00000000824	larp1	96	71.620	ENSPVAG00000002262	LARP1	97	63.486	Pteropus_vampyrus
ENSORLG00000000824	larp1	100	84.404	ENSPNYG00000007938	larp1	100	87.182	Pundamilia_nyererei
ENSORLG00000000824	larp1	98	78.580	ENSPNAG00000021427	larp1	99	74.695	Pygocentrus_nattereri
ENSORLG00000000824	larp1	98	67.815	ENSRNOG00000031544	Larp1	98	65.385	Rattus_norvegicus
ENSORLG00000000824	larp1	96	71.814	ENSRBIG00000038005	LARP1	90	68.483	Rhinopithecus_bieti
ENSORLG00000000824	larp1	96	71.814	ENSRROG00000034073	LARP1	95	69.942	Rhinopithecus_roxellana
ENSORLG00000000824	larp1	96	71.551	ENSSBOG00000019816	LARP1	96	65.919	Saimiri_boliviensis_boliviensis
ENSORLG00000000824	larp1	98	71.739	ENSSHAG00000011115	LARP1	99	68.966	Sarcophilus_harrisii
ENSORLG00000000824	larp1	96	78.408	ENSSFOG00015020304	larp1	95	76.089	Scleropages_formosus
ENSORLG00000000824	larp1	98	79.012	ENSSFOG00015018058	-	99	73.346	Scleropages_formosus
ENSORLG00000000824	larp1	92	84.625	ENSSMAG00000007468	larp1	98	82.905	Scophthalmus_maximus
ENSORLG00000000824	larp1	100	85.586	ENSSDUG00000000268	larp1	100	85.676	Seriola_dumerili
ENSORLG00000000824	larp1	94	86.582	ENSSLDG00000016505	larp1	94	86.582	Seriola_lalandi_dorsalis
ENSORLG00000000824	larp1	67	82.996	ENSSARG00000013907	-	88	77.143	Sorex_araneus
ENSORLG00000000824	larp1	99	73.109	ENSSPUG00000012179	-	99	64.659	Sphenodon_punctatus
ENSORLG00000000824	larp1	100	85.505	ENSSPAG00000003910	larp1	100	85.991	Stegastes_partitus
ENSORLG00000000824	larp1	96	70.717	ENSSSCG00000017069	LARP1	97	68.636	Sus_scrofa
ENSORLG00000000824	larp1	96	73.742	ENSTGUG00000000704	LARP1	100	70.233	Taeniopygia_guttata
ENSORLG00000000824	larp1	99	84.255	ENSTRUG00000009470	larp1	99	82.255	Takifugu_rubripes
ENSORLG00000000824	larp1	92	69.770	ENSTBEG00000003381	LARP1	99	65.615	Tupaia_belangeri
ENSORLG00000000824	larp1	99	68.881	ENSTTRG00000015934	LARP1	99	66.598	Tursiops_truncatus
ENSORLG00000000824	larp1	96	72.039	ENSUAMG00000019334	LARP1	97	63.288	Ursus_americanus
ENSORLG00000000824	larp1	96	69.682	ENSUMAG00000002934	LARP1	96	68.136	Ursus_maritimus
ENSORLG00000000824	larp1	96	72.039	ENSVVUG00000004644	LARP1	95	70.046	Vulpes_vulpes
ENSORLG00000000824	larp1	99	72.934	ENSXETG00000008413	larp1	97	68.880	Xenopus_tropicalis
ENSORLG00000000824	larp1	88	83.356	ENSXCOG00000004022	larp1	99	81.266	Xiphophorus_couchianus
ENSORLG00000000824	larp1	100	81.069	ENSXMAG00000018780	larp1	100	81.159	Xiphophorus_maculatus