EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000000852 (Gene tree)
Gene ID: 101172903
Gene Symbol: tsen54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 9014 bases
Position: chr8:1090895-1099908
Accession: 101172903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001043	tRNA_int_end_N2	PF12928.7	1.9e-18	1	1
ENSORLP00000028441	tRNA_int_end_N2	PF12928.7	5.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000001044	-	1431	-	ENSORLP00000001043	476 (aa)	-	H2L5H1
ENSORLT00000033031	-	4247	XM_004071105	ENSORLP00000028441	493 (aa)	XP_004071153	UPI0005CC02D4

Gene Model

Click here to download ENSORLG00000000852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000852	tsen54	98	44.275	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSORLG00000000852	tsen54	100	65.166	ENSAPOG00000009659	tsen54	98	65.949	Acanthochromis_polyacanthus
ENSORLG00000000852	tsen54	96	43.520	ENSAMEG00000009414	TSEN54	96	44.510	Ailuropoda_melanoleuca
ENSORLG00000000852	tsen54	100	66.928	ENSAOCG00000000152	tsen54	98	66.928	Amphiprion_ocellaris
ENSORLG00000000852	tsen54	100	65.949	ENSAPEG00000018931	tsen54	98	66.145	Amphiprion_percula
ENSORLG00000000852	tsen54	100	60.300	ENSATEG00000019860	tsen54	100	60.300	Anabas_testudineus
ENSORLG00000000852	tsen54	85	44.469	ENSAPLG00000009419	TSEN54	99	44.469	Anas_platyrhynchos
ENSORLG00000000852	tsen54	97	46.589	ENSACAG00000006714	TSEN54	98	46.589	Anolis_carolinensis
ENSORLG00000000852	tsen54	98	44.466	ENSANAG00000024061	TSEN54	98	45.769	Aotus_nancymaae
ENSORLG00000000852	tsen54	100	65.107	ENSACLG00000019800	tsen54	100	65.049	Astatotilapia_calliptera
ENSORLG00000000852	tsen54	97	56.680	ENSAMXG00000006546	tsen54	98	56.773	Astyanax_mexicanus
ENSORLG00000000852	tsen54	97	43.654	ENSBTAG00000000824	TSEN54	97	45.136	Bos_taurus
ENSORLG00000000852	tsen54	98	45.577	ENSCJAG00000014278	TSEN54	98	45.577	Callithrix_jacchus
ENSORLG00000000852	tsen54	97	44.444	ENSCAFG00000004798	TSEN54	97	45.809	Canis_familiaris
ENSORLG00000000852	tsen54	97	44.444	ENSCAFG00020000312	TSEN54	97	45.809	Canis_lupus_dingo
ENSORLG00000000852	tsen54	97	44.643	ENSCHIG00000019908	TSEN54	97	45.437	Capra_hircus
ENSORLG00000000852	tsen54	85	42.888	ENSTSYG00000037439	TSEN54	99	43.736	Carlito_syrichta
ENSORLG00000000852	tsen54	98	45.472	ENSCCAG00000036624	TSEN54	98	45.648	Cebus_capucinus
ENSORLG00000000852	tsen54	97	45.793	ENSCATG00000042877	TSEN54	98	45.577	Cercocebus_atys
ENSORLG00000000852	tsen54	97	44.401	ENSCLAG00000002924	TSEN54	96	44.401	Chinchilla_lanigera
ENSORLG00000000852	tsen54	98	44.466	ENSCSAG00000004809	TSEN54	98	45.769	Chlorocebus_sabaeus
ENSORLG00000000852	tsen54	97	46.408	ENSCPBG00000028071	TSEN54	98	46.408	Chrysemys_picta_bellii
ENSORLG00000000852	tsen54	98	45.769	ENSCANG00000028053	TSEN54	98	45.769	Colobus_angolensis_palliatus
ENSORLG00000000852	tsen54	97	44.834	ENSCGRG00001020029	Tsen54	97	44.834	Cricetulus_griseus_chok1gshd
ENSORLG00000000852	tsen54	83	42.760	ENSCGRG00000016289	Tsen54	99	42.760	Cricetulus_griseus_crigri
ENSORLG00000000852	tsen54	80	53.125	ENSCSEG00000020586	tsen54	99	53.125	Cynoglossus_semilaevis
ENSORLG00000000852	tsen54	80	52.250	ENSDARG00000036844	tsen54	99	53.250	Danio_rerio
ENSORLG00000000852	tsen54	98	44.190	ENSDNOG00000018452	TSEN54	98	45.714	Dasypus_novemcinctus
ENSORLG00000000852	tsen54	97	44.685	ENSDORG00000004073	Tsen54	97	44.685	Dipodomys_ordii
ENSORLG00000000852	tsen54	97	31.559	ENSEBUG00000005203	TSEN54	95	31.559	Eptatretus_burgeri
ENSORLG00000000852	tsen54	98	45.802	ENSEASG00005000579	TSEN54	98	45.802	Equus_asinus_asinus
ENSORLG00000000852	tsen54	98	45.802	ENSECAG00000004924	TSEN54	98	45.802	Equus_caballus
ENSORLG00000000852	tsen54	85	40.693	ENSEEUG00000008467	TSEN54	99	42.451	Erinaceus_europaeus
ENSORLG00000000852	tsen54	99	53.458	ENSELUG00000017703	tsen54	92	54.206	Esox_lucius
ENSORLG00000000852	tsen54	97	43.954	ENSFCAG00000023712	TSEN54	97	44.595	Felis_catus
ENSORLG00000000852	tsen54	93	44.559	ENSFALG00000001119	TSEN54	93	44.559	Ficedula_albicollis
ENSORLG00000000852	tsen54	85	42.795	ENSFDAG00000019090	TSEN54	99	43.384	Fukomys_damarensis
ENSORLG00000000852	tsen54	100	69.841	ENSFHEG00000005470	tsen54	100	69.841	Fundulus_heteroclitus
ENSORLG00000000852	tsen54	96	46.497	ENSGMOG00000013146	tsen54	99	46.862	Gadus_morhua
ENSORLG00000000852	tsen54	93	42.626	ENSGALG00000047163	TSEN54	96	42.626	Gallus_gallus
ENSORLG00000000852	tsen54	100	67.936	ENSGAFG00000005111	tsen54	100	67.936	Gambusia_affinis
ENSORLG00000000852	tsen54	97	60.663	ENSGACG00000014987	tsen54	100	60.619	Gasterosteus_aculeatus
ENSORLG00000000852	tsen54	97	46.080	ENSGAGG00000006825	TSEN54	96	46.463	Gopherus_agassizii
ENSORLG00000000852	tsen54	96	44.163	ENSGGOG00000009417	TSEN54	99	45.490	Gorilla_gorilla
ENSORLG00000000852	tsen54	90	62.851	ENSHBUG00000018296	tsen54	92	62.796	Haplochromis_burtoni
ENSORLG00000000852	tsen54	97	45.977	ENSHGLG00000007979	TSEN54	97	45.977	Heterocephalus_glaber_female
ENSORLG00000000852	tsen54	97	45.019	ENSHGLG00100005497	TSEN54	97	45.019	Heterocephalus_glaber_male
ENSORLG00000000852	tsen54	80	55.392	ENSHCOG00000007481	tsen54	99	55.392	Hippocampus_comes
ENSORLG00000000852	tsen54	98	51.509	ENSIPUG00000000590	tsen54	97	51.308	Ictalurus_punctatus
ENSORLG00000000852	tsen54	97	44.773	ENSSTOG00000012883	TSEN54	97	44.773	Ictidomys_tridecemlineatus
ENSORLG00000000852	tsen54	97	44.814	ENSJJAG00000007365	Tsen54	97	44.814	Jaculus_jaculus
ENSORLG00000000852	tsen54	100	62.453	ENSKMAG00000006944	tsen54	100	62.453	Kryptolebias_marmoratus
ENSORLG00000000852	tsen54	100	60.653	ENSLBEG00000004199	tsen54	100	61.420	Labrus_bergylta
ENSORLG00000000852	tsen54	97	40.426	ENSLACG00000009497	TSEN54	99	40.426	Latimeria_chalumnae
ENSORLG00000000852	tsen54	99	52.830	ENSLOCG00000011191	tsen54	99	52.830	Lepisosteus_oculatus
ENSORLG00000000852	tsen54	92	45.041	ENSLAFG00000011655	TSEN54	92	45.549	Loxodonta_africana
ENSORLG00000000852	tsen54	98	44.466	ENSMFAG00000000712	TSEN54	98	45.769	Macaca_fascicularis
ENSORLG00000000852	tsen54	98	44.466	ENSMNEG00000029199	TSEN54	98	45.769	Macaca_nemestrina
ENSORLG00000000852	tsen54	85	42.670	ENSMLEG00000044168	TSEN54	88	44.150	Mandrillus_leucophaeus
ENSORLG00000000852	tsen54	100	63.086	ENSMAMG00000019773	tsen54	100	63.086	Mastacembelus_armatus
ENSORLG00000000852	tsen54	100	64.912	ENSMZEG00005000884	tsen54	100	64.854	Maylandia_zebra
ENSORLG00000000852	tsen54	93	42.596	ENSMGAG00000009556	TSEN54	93	42.972	Meleagris_gallopavo
ENSORLG00000000852	tsen54	99	44.762	ENSMAUG00000016838	Tsen54	99	44.762	Mesocricetus_auratus
ENSORLG00000000852	tsen54	97	45.968	ENSMICG00000044012	TSEN54	96	46.573	Microcebus_murinus
ENSORLG00000000852	tsen54	97	46.047	ENSMOCG00000021585	Tsen54	97	46.047	Microtus_ochrogaster
ENSORLG00000000852	tsen54	96	60.246	ENSMMOG00000020189	tsen54	99	61.066	Mola_mola
ENSORLG00000000852	tsen54	97	43.321	ENSMODG00000007438	TSEN54	95	43.321	Monodelphis_domestica
ENSORLG00000000852	tsen54	99	64.808	ENSMALG00000020573	tsen54	99	65.000	Monopterus_albus
ENSORLG00000000852	tsen54	97	44.553	MGP_CAROLIEiJ_G0017417	Tsen54	97	44.553	Mus_caroli
ENSORLG00000000852	tsen54	97	44.970	ENSMUSG00000020781	Tsen54	97	44.970	Mus_musculus
ENSORLG00000000852	tsen54	97	45.168	MGP_PahariEiJ_G0018547	Tsen54	97	45.168	Mus_pahari
ENSORLG00000000852	tsen54	97	44.576	MGP_SPRETEiJ_G0018262	Tsen54	97	44.576	Mus_spretus
ENSORLG00000000852	tsen54	98	43.295	ENSMPUG00000013870	TSEN54	98	44.828	Mustela_putorius_furo
ENSORLG00000000852	tsen54	97	43.750	ENSMLUG00000015298	TSEN54	96	45.766	Myotis_lucifugus
ENSORLG00000000852	tsen54	97	46.063	ENSNGAG00000015673	Tsen54	97	46.063	Nannospalax_galili
ENSORLG00000000852	tsen54	88	39.914	ENSMEUG00000011908	TSEN54	99	39.914	Notamacropus_eugenii
ENSORLG00000000852	tsen54	97	44.064	ENSOPRG00000012513	TSEN54	96	44.064	Ochotona_princeps
ENSORLG00000000852	tsen54	100	65.175	ENSONIG00000009543	tsen54	100	65.175	Oreochromis_niloticus
ENSORLG00000000852	tsen54	97	42.085	ENSOCUG00000009875	TSEN54	97	44.533	Oryctolagus_cuniculus
ENSORLG00000000852	tsen54	100	98.580	ENSORLG00020018221	tsen54	100	98.580	Oryzias_latipes_hni
ENSORLG00000000852	tsen54	99	98.156	ENSORLG00015009413	tsen54	100	98.156	Oryzias_latipes_hsok
ENSORLG00000000852	tsen54	100	85.396	ENSOMEG00000014402	tsen54	97	85.396	Oryzias_melastigma
ENSORLG00000000852	tsen54	97	43.504	ENSOGAG00000001442	TSEN54	97	43.504	Otolemur_garnettii
ENSORLG00000000852	tsen54	85	40.220	ENSOARG00000010361	TSEN54	99	42.418	Ovis_aries
ENSORLG00000000852	tsen54	94	43.825	ENSPPAG00000043519	TSEN54	99	45.181	Pan_paniscus
ENSORLG00000000852	tsen54	97	44.338	ENSPPRG00000009162	TSEN54	97	44.981	Panthera_pardus
ENSORLG00000000852	tsen54	85	41.814	ENSPTIG00000019312	TSEN54	96	43.584	Panthera_tigris_altaica
ENSORLG00000000852	tsen54	98	44.190	ENSPTRG00000009646	TSEN54	98	45.489	Pan_troglodytes
ENSORLG00000000852	tsen54	98	45.400	ENSPANG00000020133	TSEN54	98	45.577	Papio_anubis
ENSORLG00000000852	tsen54	98	52.328	ENSPKIG00000023018	tsen54	99	51.807	Paramormyrops_kingsleyae
ENSORLG00000000852	tsen54	80	44.626	ENSPSIG00000012807	TSEN54	99	44.626	Pelodiscus_sinensis
ENSORLG00000000852	tsen54	93	47.021	ENSPMGG00000019578	tsen54	100	47.021	Periophthalmus_magnuspinnatus
ENSORLG00000000852	tsen54	97	44.574	ENSPEMG00000014857	Tsen54	97	45.098	Peromyscus_maniculatus_bairdii
ENSORLG00000000852	tsen54	100	66.998	ENSPFOG00000022740	tsen54	100	66.998	Poecilia_formosa
ENSORLG00000000852	tsen54	100	66.934	ENSPLAG00000014847	tsen54	100	66.934	Poecilia_latipinna
ENSORLG00000000852	tsen54	100	66.733	ENSPMEG00000022876	tsen54	100	66.733	Poecilia_mexicana
ENSORLG00000000852	tsen54	100	66.197	ENSPREG00000013090	tsen54	100	66.333	Poecilia_reticulata
ENSORLG00000000852	tsen54	91	44.227	ENSPPYG00000008629	TSEN54	99	44.565	Pongo_abelii
ENSORLG00000000852	tsen54	92	41.649	ENSPCAG00000002093	TSEN54	96	42.474	Procavia_capensis
ENSORLG00000000852	tsen54	97	43.922	ENSPCOG00000027880	TSEN54	97	45.205	Propithecus_coquereli
ENSORLG00000000852	tsen54	97	44.553	ENSPVAG00000008446	TSEN54	97	45.136	Pteropus_vampyrus
ENSORLG00000000852	tsen54	94	64.403	ENSPNYG00000010217	tsen54	100	64.344	Pundamilia_nyererei
ENSORLG00000000852	tsen54	99	55.361	ENSPNAG00000003770	tsen54	98	55.361	Pygocentrus_nattereri
ENSORLG00000000852	tsen54	97	45.490	ENSRNOG00000004598	Tsen54	97	45.490	Rattus_norvegicus
ENSORLG00000000852	tsen54	98	45.577	ENSRBIG00000043040	TSEN54	98	45.577	Rhinopithecus_bieti
ENSORLG00000000852	tsen54	98	45.577	ENSRROG00000030797	TSEN54	98	45.577	Rhinopithecus_roxellana
ENSORLG00000000852	tsen54	98	42.095	ENSSBOG00000013543	TSEN54	97	43.378	Saimiri_boliviensis_boliviensis
ENSORLG00000000852	tsen54	97	44.338	ENSSHAG00000018127	TSEN54	96	44.338	Sarcophilus_harrisii
ENSORLG00000000852	tsen54	80	52.358	ENSSFOG00015004093	tsen54	99	52.706	Scleropages_formosus
ENSORLG00000000852	tsen54	97	61.057	ENSSMAG00000012449	tsen54	98	62.622	Scophthalmus_maximus
ENSORLG00000000852	tsen54	100	65.451	ENSSDUG00000021506	tsen54	100	65.643	Seriola_dumerili
ENSORLG00000000852	tsen54	100	65.451	ENSSLDG00000016303	tsen54	100	65.643	Seriola_lalandi_dorsalis
ENSORLG00000000852	tsen54	79	41.822	ENSSPUG00000008988	TSEN54	96	41.822	Sphenodon_punctatus
ENSORLG00000000852	tsen54	93	64.226	ENSSPAG00000008098	-	100	64.226	Stegastes_partitus
ENSORLG00000000852	tsen54	80	58.765	ENSSPAG00000008047	tsen54	99	58.765	Stegastes_partitus
ENSORLG00000000852	tsen54	97	45.205	ENSSSCG00000036852	TSEN54	97	45.793	Sus_scrofa
ENSORLG00000000852	tsen54	85	44.444	ENSTGUG00000008548	TSEN54	99	44.444	Taeniopygia_guttata
ENSORLG00000000852	tsen54	100	63.400	ENSTRUG00000004230	tsen54	100	63.400	Takifugu_rubripes
ENSORLG00000000852	tsen54	97	61.538	ENSTNIG00000011281	tsen54	98	62.677	Tetraodon_nigroviridis
ENSORLG00000000852	tsen54	83	42.438	ENSTTRG00000015828	TSEN54	97	44.244	Tursiops_truncatus
ENSORLG00000000852	tsen54	80	41.549	ENSUAMG00000010045	TSEN54	99	42.488	Ursus_americanus
ENSORLG00000000852	tsen54	83	40.969	ENSUMAG00000008979	TSEN54	99	43.084	Ursus_maritimus
ENSORLG00000000852	tsen54	97	43.774	ENSVVUG00000011411	TSEN54	98	45.136	Vulpes_vulpes
ENSORLG00000000852	tsen54	97	46.016	ENSXETG00000012532	tsen54	100	62.500	Xenopus_tropicalis
ENSORLG00000000852	tsen54	97	60.248	ENSXCOG00000018245	tsen54	99	61.916	Xiphophorus_couchianus
ENSORLG00000000852	tsen54	100	67.335	ENSXMAG00000018818	tsen54	100	67.335	Xiphophorus_maculatus