EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000000905 (Gene tree)
Gene ID: 101159826
Gene Symbol: rbfox3b
Alias: -
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 375772 bases
Position: chr8:1293655-1669426
Accession: 101159826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039977	Fox-1_C	PF12414.8	9.5e-43	1	1
ENSORLP00000043915	Fox-1_C	PF12414.8	3.1e-42	1	1
ENSORLP00000001106	Fox-1_C	PF12414.8	3.4e-42	1	1
ENSORLP00000041458	Fox-1_C	PF12414.8	3.9e-42	1	1
ENSORLP00000038530	Fox-1_C	PF12414.8	4.1e-42	1	1
ENSORLP00000043915	RRM_1	PF00076.22	2.4e-18	1	1
ENSORLP00000001106	RRM_1	PF00076.22	2.7e-18	1	1
ENSORLP00000039977	RRM_1	PF00076.22	3e-18	1	1
ENSORLP00000041458	RRM_1	PF00076.22	3.1e-18	1	1
ENSORLP00000038530	RRM_1	PF00076.22	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035340	-	1572	-	ENSORLP00000039977	523 (aa)	-	-
ENSORLT00000027408	-	1389	XM_023957268	ENSORLP00000043915	462 (aa)	XP_023813036	-
ENSORLT00000045739	-	1671	-	ENSORLP00000038530	556 (aa)	-	-
ENSORLT00000001107	-	1476	XM_023957266	ENSORLP00000001106	491 (aa)	XP_023813034	H2L5M6
ENSORLT00000035336	-	1629	-	ENSORLP00000041458	542 (aa)	-	-

Gene Model

Click here to download ENSORLG00000000905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000000905	rbfox3b	62	60.000	ENSORLG00000011269	rbfox1l	87	60.299
ENSORLG00000000905	rbfox3b	55	59.794	ENSORLG00000014948	-	84	52.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000905	rbfox3b	65	79.402	ENSG00000167281	RBFOX3	99	90.541	Homo_sapiens
ENSORLG00000000905	rbfox3b	79	98.082	ENSAPOG00000021630	rbfox3b	100	98.688	Acanthochromis_polyacanthus
ENSORLG00000000905	rbfox3b	79	69.377	ENSAPOG00000015658	-	91	70.190	Acanthochromis_polyacanthus
ENSORLG00000000905	rbfox3b	70	76.012	ENSAMEG00000014170	RBFOX3	99	72.821	Ailuropoda_melanoleuca
ENSORLG00000000905	rbfox3b	67	69.325	ENSACIG00000003768	-	90	71.166	Amphilophus_citrinellus
ENSORLG00000000905	rbfox3b	68	93.930	ENSACIG00000010817	rbfox3b	100	93.968	Amphilophus_citrinellus
ENSORLG00000000905	rbfox3b	79	79.076	ENSAOCG00000010786	-	98	80.435	Amphiprion_ocellaris
ENSORLG00000000905	rbfox3b	79	98.082	ENSAOCG00000012358	rbfox3b	100	98.638	Amphiprion_ocellaris
ENSORLG00000000905	rbfox3b	73	73.056	ENSAPEG00000015891	-	91	72.900	Amphiprion_percula
ENSORLG00000000905	rbfox3b	79	88.798	ENSAPEG00000019081	rbfox3b	99	88.251	Amphiprion_percula
ENSORLG00000000905	rbfox3b	68	88.338	ENSATEG00000019945	rbfox3b	100	88.116	Anabas_testudineus
ENSORLG00000000905	rbfox3b	65	80.066	ENSATEG00000023101	-	97	80.503	Anabas_testudineus
ENSORLG00000000905	rbfox3b	77	80.223	ENSACAG00000016093	RBFOX3	99	82.173	Anolis_carolinensis
ENSORLG00000000905	rbfox3b	64	79.333	ENSANAG00000023457	RBFOX3	100	82.222	Aotus_nancymaae
ENSORLG00000000905	rbfox3b	79	81.199	ENSACLG00000025552	-	100	82.561	Astatotilapia_calliptera
ENSORLG00000000905	rbfox3b	79	97.541	ENSACLG00000020011	rbfox3b	100	98.168	Astatotilapia_calliptera
ENSORLG00000000905	rbfox3b	76	85.876	ENSAMXG00000042841	rbfox3b	100	85.876	Astyanax_mexicanus
ENSORLG00000000905	rbfox3b	79	82.796	ENSAMXG00000037246	rbfox3a	100	84.946	Astyanax_mexicanus
ENSORLG00000000905	rbfox3b	55	81.176	ENSBTAG00000006280	RBFOX3	100	63.536	Bos_taurus
ENSORLG00000000905	rbfox3b	65	74.333	ENSCJAG00000009563	RBFOX3	100	71.745	Callithrix_jacchus
ENSORLG00000000905	rbfox3b	52	84.647	ENSCAFG00000005547	RBFOX3	100	79.787	Canis_familiaris
ENSORLG00000000905	rbfox3b	67	66.313	ENSCAFG00020008126	RBFOX3	100	72.606	Canis_lupus_dingo
ENSORLG00000000905	rbfox3b	67	66.048	ENSCHIG00000009124	RBFOX3	100	72.340	Capra_hircus
ENSORLG00000000905	rbfox3b	64	68.300	ENSTSYG00000029617	RBFOX3	100	72.099	Carlito_syrichta
ENSORLG00000000905	rbfox3b	67	67.368	ENSCPOG00000021703	RBFOX3	100	71.768	Cavia_porcellus
ENSORLG00000000905	rbfox3b	64	79.333	ENSCCAG00000028450	RBFOX3	100	82.222	Cebus_capucinus
ENSORLG00000000905	rbfox3b	64	79.667	ENSCATG00000018349	RBFOX3	100	82.540	Cercocebus_atys
ENSORLG00000000905	rbfox3b	67	67.725	ENSCLAG00000006449	RBFOX3	100	72.149	Chinchilla_lanigera
ENSORLG00000000905	rbfox3b	64	79.667	ENSCSAG00000002355	RBFOX3	100	82.540	Chlorocebus_sabaeus
ENSORLG00000000905	rbfox3b	70	83.642	ENSCPBG00000010904	RBFOX3	100	83.706	Chrysemys_picta_bellii
ENSORLG00000000905	rbfox3b	64	79.667	ENSCANG00000043120	RBFOX3	100	82.540	Colobus_angolensis_palliatus
ENSORLG00000000905	rbfox3b	67	65.699	ENSCGRG00001019476	Rbfox3	100	71.883	Cricetulus_griseus_chok1gshd
ENSORLG00000000905	rbfox3b	67	65.699	ENSCGRG00000003268	Rbfox3	100	71.883	Cricetulus_griseus_crigri
ENSORLG00000000905	rbfox3b	79	79.348	ENSCSEG00000015567	RBFOX3	98	80.707	Cynoglossus_semilaevis
ENSORLG00000000905	rbfox3b	79	77.778	ENSCSEG00000020606	RBFOX3	100	77.778	Cynoglossus_semilaevis
ENSORLG00000000905	rbfox3b	69	98.611	ENSCVAG00000006882	rbfox3b	100	98.638	Cyprinodon_variegatus
ENSORLG00000000905	rbfox3b	68	78.981	ENSDARG00000074310	rbfox3b	97	79.911	Danio_rerio
ENSORLG00000000905	rbfox3b	79	83.827	ENSDARG00000010083	rbfox3a	100	85.984	Danio_rerio
ENSORLG00000000905	rbfox3b	53	68.729	ENSDNOG00000039391	RBFOX3	81	90.000	Dasypus_novemcinctus
ENSORLG00000000905	rbfox3b	67	61.333	ENSDORG00000005352	Rbfox3	100	65.952	Dipodomys_ordii
ENSORLG00000000905	rbfox3b	61	56.552	ENSEBUG00000013559	RBFOX3	81	56.552	Eptatretus_burgeri
ENSORLG00000000905	rbfox3b	78	62.935	ENSEBUG00000002129	RBFOX3	99	70.538	Eptatretus_burgeri
ENSORLG00000000905	rbfox3b	64	80.132	ENSEASG00005005059	RBFOX3	100	82.334	Equus_asinus_asinus
ENSORLG00000000905	rbfox3b	65	79.538	ENSECAG00000023811	RBFOX3	100	82.019	Equus_caballus
ENSORLG00000000905	rbfox3b	60	80.000	ENSEEUG00000013974	RBFOX3	76	89.333	Erinaceus_europaeus
ENSORLG00000000905	rbfox3b	79	93.151	ENSELUG00000017963	rbfox3b	100	95.013	Esox_lucius
ENSORLG00000000905	rbfox3b	77	79.444	ENSFCAG00000002555	RBFOX3	100	82.371	Felis_catus
ENSORLG00000000905	rbfox3b	70	67.877	ENSFALG00000012288	RBFOX3	99	64.198	Ficedula_albicollis
ENSORLG00000000905	rbfox3b	67	62.368	ENSFDAG00000007489	RBFOX3	100	66.755	Fukomys_damarensis
ENSORLG00000000905	rbfox3b	68	88.782	ENSFHEG00000008550	rbfox3b	100	88.782	Fundulus_heteroclitus
ENSORLG00000000905	rbfox3b	68	68.333	ENSGMOG00000019304	-	100	69.786	Gadus_morhua
ENSORLG00000000905	rbfox3b	77	81.844	ENSGALG00000032889	RBFOX3	99	83.799	Gallus_gallus
ENSORLG00000000905	rbfox3b	79	90.164	ENSGAFG00000005025	rbfox3b	100	91.826	Gambusia_affinis
ENSORLG00000000905	rbfox3b	67	66.667	ENSGACG00000002138	-	100	73.016	Gasterosteus_aculeatus
ENSORLG00000000905	rbfox3b	77	83.473	ENSGAGG00000020025	RBFOX3	100	83.706	Gopherus_agassizii
ENSORLG00000000905	rbfox3b	64	79.667	ENSGGOG00000012546	RBFOX3	100	82.540	Gorilla_gorilla
ENSORLG00000000905	rbfox3b	79	97.808	ENSHBUG00000018099	rbfox3b	100	98.425	Haplochromis_burtoni
ENSORLG00000000905	rbfox3b	71	80.422	ENSHBUG00000023098	-	99	82.659	Haplochromis_burtoni
ENSORLG00000000905	rbfox3b	67	66.754	ENSHGLG00000008679	RBFOX3	100	70.866	Heterocephalus_glaber_female
ENSORLG00000000905	rbfox3b	67	63.874	ENSHGLG00100014739	RBFOX3	100	67.979	Heterocephalus_glaber_male
ENSORLG00000000905	rbfox3b	68	73.333	ENSHCOG00000001863	RBFOX3	93	74.921	Hippocampus_comes
ENSORLG00000000905	rbfox3b	69	79.945	ENSHCOG00000007444	RBFOX3	94	80.541	Hippocampus_comes
ENSORLG00000000905	rbfox3b	68	72.754	ENSIPUG00000021966	rbfox3b	98	85.227	Ictalurus_punctatus
ENSORLG00000000905	rbfox3b	79	81.941	ENSIPUG00000012010	rbfox3a	100	84.655	Ictalurus_punctatus
ENSORLG00000000905	rbfox3b	67	61.791	ENSSTOG00000026817	RBFOX3	100	67.568	Ictidomys_tridecemlineatus
ENSORLG00000000905	rbfox3b	67	65.252	ENSJJAG00000014167	Rbfox3	100	72.340	Jaculus_jaculus
ENSORLG00000000905	rbfox3b	79	97.808	ENSKMAG00000006726	rbfox3b	100	98.638	Kryptolebias_marmoratus
ENSORLG00000000905	rbfox3b	79	85.559	ENSLBEG00000022508	-	100	85.559	Labrus_bergylta
ENSORLG00000000905	rbfox3b	79	98.082	ENSLBEG00000004030	rbfox3b	100	98.082	Labrus_bergylta
ENSORLG00000000905	rbfox3b	70	71.067	ENSLACG00000018409	-	100	69.367	Latimeria_chalumnae
ENSORLG00000000905	rbfox3b	70	88.037	ENSLOCG00000012267	rbfox3a	98	90.184	Lepisosteus_oculatus
ENSORLG00000000905	rbfox3b	70	73.389	ENSLAFG00000016623	RBFOX3	100	72.340	Loxodonta_africana
ENSORLG00000000905	rbfox3b	64	68.208	ENSMFAG00000002247	RBFOX3	100	72.022	Macaca_fascicularis
ENSORLG00000000905	rbfox3b	64	79.667	ENSMMUG00000023028	RBFOX3	100	82.540	Macaca_mulatta
ENSORLG00000000905	rbfox3b	64	79.333	ENSMNEG00000041147	RBFOX3	100	82.222	Macaca_nemestrina
ENSORLG00000000905	rbfox3b	64	79.667	ENSMLEG00000025686	RBFOX3	100	82.540	Mandrillus_leucophaeus
ENSORLG00000000905	rbfox3b	70	79.205	ENSMAMG00000020600	-	99	78.161	Mastacembelus_armatus
ENSORLG00000000905	rbfox3b	68	87.859	ENSMAMG00000019810	rbfox3b	100	87.937	Mastacembelus_armatus
ENSORLG00000000905	rbfox3b	79	97.808	ENSMZEG00005000781	rbfox3b	100	98.425	Maylandia_zebra
ENSORLG00000000905	rbfox3b	65	61.310	ENSMZEG00005003055	-	81	62.798	Maylandia_zebra
ENSORLG00000000905	rbfox3b	67	67.196	ENSMAUG00000013543	Rbfox3	100	71.809	Mesocricetus_auratus
ENSORLG00000000905	rbfox3b	70	81.790	ENSMICG00000014898	RBFOX3	100	82.166	Microcebus_murinus
ENSORLG00000000905	rbfox3b	67	65.079	ENSMOCG00000015373	Rbfox3	100	71.277	Microtus_ochrogaster
ENSORLG00000000905	rbfox3b	79	92.412	ENSMMOG00000020193	rbfox3b	100	96.477	Mola_mola
ENSORLG00000000905	rbfox3b	77	79.666	ENSMODG00000002089	RBFOX3	99	81.616	Monodelphis_domestica
ENSORLG00000000905	rbfox3b	79	82.834	ENSMALG00000018270	-	100	84.196	Monopterus_albus
ENSORLG00000000905	rbfox3b	79	96.164	ENSMALG00000020407	rbfox3b	100	97.003	Monopterus_albus
ENSORLG00000000905	rbfox3b	64	78.333	MGP_CAROLIEiJ_G0017487	Rbfox3	96	89.209	Mus_caroli
ENSORLG00000000905	rbfox3b	64	80.066	ENSMUSG00000025576	Rbfox3	96	89.209	Mus_musculus
ENSORLG00000000905	rbfox3b	64	79.070	MGP_PahariEiJ_G0018614	Rbfox3	96	89.928	Mus_pahari
ENSORLG00000000905	rbfox3b	64	78.667	MGP_SPRETEiJ_G0018331	Rbfox3	96	89.209	Mus_spretus
ENSORLG00000000905	rbfox3b	73	69.773	ENSMPUG00000012319	RBFOX3	99	74.278	Mustela_putorius_furo
ENSORLG00000000905	rbfox3b	67	66.138	ENSNGAG00000018006	Rbfox3	100	72.414	Nannospalax_galili
ENSORLG00000000905	rbfox3b	69	97.222	ENSNBRG00000010102	rbfox3b	100	97.275	Neolamprologus_brichardi
ENSORLG00000000905	rbfox3b	71	74.924	ENSNBRG00000022885	-	91	76.205	Neolamprologus_brichardi
ENSORLG00000000905	rbfox3b	68	55.238	ENSNLEG00000000153	-	96	55.556	Nomascus_leucogenys
ENSORLG00000000905	rbfox3b	62	87.234	ENSMEUG00000004218	-	84	87.234	Notamacropus_eugenii
ENSORLG00000000905	rbfox3b	54	81.667	ENSOPRG00000016279	-	71	83.333	Ochotona_princeps
ENSORLG00000000905	rbfox3b	64	81.395	ENSODEG00000009433	RBFOX3	100	81.962	Octodon_degus
ENSORLG00000000905	rbfox3b	69	98.889	ENSONIG00000009549	rbfox3b	100	98.910	Oreochromis_niloticus
ENSORLG00000000905	rbfox3b	70	81.846	ENSONIG00000007282	-	99	80.826	Oreochromis_niloticus
ENSORLG00000000905	rbfox3b	87	99.376	ENSORLG00020018030	rbfox3b	100	100.000	Oryzias_latipes_hni
ENSORLG00000000905	rbfox3b	79	99.728	ENSORLG00015009200	rbfox3b	100	99.738	Oryzias_latipes_hsok
ENSORLG00000000905	rbfox3b	67	99.083	ENSOMEG00000014677	rbfox3b	86	99.083	Oryzias_melastigma
ENSORLG00000000905	rbfox3b	71	78.963	ENSOGAG00000029595	RBFOX3	97	76.033	Otolemur_garnettii
ENSORLG00000000905	rbfox3b	70	58.757	ENSOARG00000002908	RBFOX3	100	57.002	Ovis_aries
ENSORLG00000000905	rbfox3b	55	81.176	ENSPPAG00000025383	RBFOX3	99	81.597	Pan_paniscus
ENSORLG00000000905	rbfox3b	64	67.647	ENSPPRG00000007819	RBFOX3	100	72.394	Panthera_pardus
ENSORLG00000000905	rbfox3b	64	79.667	ENSPTRG00000009727	RBFOX3	100	82.540	Pan_troglodytes
ENSORLG00000000905	rbfox3b	64	79.667	ENSPANG00000019837	RBFOX3	100	82.540	Papio_anubis
ENSORLG00000000905	rbfox3b	71	71.341	ENSPKIG00000022633	-	99	66.667	Paramormyrops_kingsleyae
ENSORLG00000000905	rbfox3b	87	75.540	ENSPKIG00000010299	rbfox3a	99	88.439	Paramormyrops_kingsleyae
ENSORLG00000000905	rbfox3b	69	91.049	ENSPMGG00000008000	rbfox3b	100	91.975	Periophthalmus_magnuspinnatus
ENSORLG00000000905	rbfox3b	67	65.608	ENSPEMG00000010500	Rbfox3	100	71.809	Peromyscus_maniculatus_bairdii
ENSORLG00000000905	rbfox3b	77	70.936	ENSPCIG00000005766	RBFOX3	100	72.930	Phascolarctos_cinereus
ENSORLG00000000905	rbfox3b	69	98.688	ENSPFOG00000018294	rbfox3b	100	98.688	Poecilia_formosa
ENSORLG00000000905	rbfox3b	52	93.724	ENSPLAG00000000481	rbfox3b	79	93.359	Poecilia_latipinna
ENSORLG00000000905	rbfox3b	68	88.462	ENSPMEG00000022997	rbfox3b	100	88.462	Poecilia_mexicana
ENSORLG00000000905	rbfox3b	79	97.820	ENSPREG00000012886	rbfox3b	100	98.113	Poecilia_reticulata
ENSORLG00000000905	rbfox3b	72	66.854	ENSPPYG00000008704	RBFOX3	99	70.796	Pongo_abelii
ENSORLG00000000905	rbfox3b	64	65.607	ENSPCAG00000001401	RBFOX3	100	70.360	Procavia_capensis
ENSORLG00000000905	rbfox3b	68	68.421	ENSPCOG00000012689	RBFOX3	100	71.191	Propithecus_coquereli
ENSORLG00000000905	rbfox3b	64	59.366	ENSPVAG00000015243	RBFOX3	100	63.812	Pteropus_vampyrus
ENSORLG00000000905	rbfox3b	79	85.598	ENSPNYG00000010414	rbfox3b	99	85.598	Pundamilia_nyererei
ENSORLG00000000905	rbfox3b	79	76.230	ENSPNYG00000009079	-	96	76.902	Pundamilia_nyererei
ENSORLG00000000905	rbfox3b	79	83.065	ENSPNAG00000002889	rbfox3a	100	85.676	Pygocentrus_nattereri
ENSORLG00000000905	rbfox3b	68	69.968	ENSPNAG00000018173	rbfox3b	91	70.701	Pygocentrus_nattereri
ENSORLG00000000905	rbfox3b	64	79.070	ENSRNOG00000003386	Rbfox3	100	81.646	Rattus_norvegicus
ENSORLG00000000905	rbfox3b	77	79.444	ENSRBIG00000040449	RBFOX3	99	81.389	Rhinopithecus_bieti
ENSORLG00000000905	rbfox3b	64	79.667	ENSRROG00000000766	RBFOX3	100	82.540	Rhinopithecus_roxellana
ENSORLG00000000905	rbfox3b	64	79.333	ENSSBOG00000031591	RBFOX3	100	82.222	Saimiri_boliviensis_boliviensis
ENSORLG00000000905	rbfox3b	70	73.816	ENSSHAG00000016076	RBFOX3	100	72.930	Sarcophilus_harrisii
ENSORLG00000000905	rbfox3b	77	82.123	ENSSFOG00015023260	rbfox3a	100	88.402	Scleropages_formosus
ENSORLG00000000905	rbfox3b	77	72.928	ENSSFOG00015004716	RBFOX3	99	72.928	Scleropages_formosus
ENSORLG00000000905	rbfox3b	79	90.513	ENSSMAG00000012618	rbfox3b	90	93.216	Scophthalmus_maximus
ENSORLG00000000905	rbfox3b	79	82.289	ENSSMAG00000019052	-	100	83.758	Scophthalmus_maximus
ENSORLG00000000905	rbfox3b	79	76.087	ENSSDUG00000015801	-	98	78.090	Seriola_dumerili
ENSORLG00000000905	rbfox3b	68	88.782	ENSSDUG00000023183	rbfox3b	100	88.782	Seriola_dumerili
ENSORLG00000000905	rbfox3b	79	98.356	ENSSLDG00000000149	rbfox3b	100	98.910	Seriola_lalandi_dorsalis
ENSORLG00000000905	rbfox3b	79	79.348	ENSSLDG00000016098	-	98	80.707	Seriola_lalandi_dorsalis
ENSORLG00000000905	rbfox3b	77	74.373	ENSSPUG00000011733	RBFOX3	99	83.758	Sphenodon_punctatus
ENSORLG00000000905	rbfox3b	79	89.344	ENSSPAG00000017571	rbfox3b	99	89.344	Stegastes_partitus
ENSORLG00000000905	rbfox3b	58	77.574	ENSSPAG00000004898	-	85	78.049	Stegastes_partitus
ENSORLG00000000905	rbfox3b	58	80.952	ENSSSCG00000039498	RBFOX3	100	72.372	Sus_scrofa
ENSORLG00000000905	rbfox3b	73	87.535	ENSTRUG00000004894	rbfox3b	97	89.914	Takifugu_rubripes
ENSORLG00000000905	rbfox3b	71	86.704	ENSTNIG00000011278	rbfox3b	99	82.532	Tetraodon_nigroviridis
ENSORLG00000000905	rbfox3b	64	62.717	ENSTTRG00000003676	RBFOX3	100	66.759	Tursiops_truncatus
ENSORLG00000000905	rbfox3b	64	80.000	ENSUAMG00000004668	RBFOX3	100	82.857	Ursus_americanus
ENSORLG00000000905	rbfox3b	77	79.778	ENSVVUG00000017864	RBFOX3	100	82.540	Vulpes_vulpes
ENSORLG00000000905	rbfox3b	70	66.954	ENSXETG00000020236	rbfox3	98	63.049	Xenopus_tropicalis
ENSORLG00000000905	rbfox3b	77	89.444	ENSXCOG00000018262	rbfox3b	100	97.230	Xiphophorus_couchianus
ENSORLG00000000905	rbfox3b	79	98.082	ENSXMAG00000012939	rbfox3b	100	98.950	Xiphophorus_maculatus