EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000000932 (Gene tree)
Gene ID: 101172263
Gene Symbol: sar1b
Alias: -
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 8706 bases
Position: chr14:3782727-3791432
Accession: 101172263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000027811	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046317	-	2730	XM_023962388	ENSORLP00000027811	198 (aa)	XP_023818156	UPI0000E9E8A1
ENSORLT00000001136	-	582	-	ENSORLP00000001135	193 (aa)	-	H2L5Q2

Gene Model

Click here to download ENSORLG00000000932's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000000932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000000932	sar1b	86	31.579	ENSORLG00000007235	-	85	31.579
ENSORLG00000000932	sar1b	66	34.074	ENSORLG00000029448	arl4aa	70	34.074
ENSORLG00000000932	sar1b	94	31.915	ENSORLG00000005005	arl3l2	94	31.915
ENSORLG00000000932	sar1b	64	33.333	ENSORLG00000026726	-	69	33.333
ENSORLG00000000932	sar1b	87	30.233	ENSORLG00000010952	arl3	92	30.233
ENSORLG00000000932	sar1b	89	30.000	ENSORLG00000015588	-	81	30.000
ENSORLG00000000932	sar1b	64	34.127	ENSORLG00000006350	arl13b	50	34.127
ENSORLG00000000932	sar1b	73	32.000	ENSORLG00000013843	arl4cb	76	32.000
ENSORLG00000000932	sar1b	92	30.601	ENSORLG00000005571	arl2	93	30.601
ENSORLG00000000932	sar1b	94	31.579	ENSORLG00000005063	ARL6	96	31.579
ENSORLG00000000932	sar1b	73	31.677	ENSORLG00000018307	-	84	31.677
ENSORLG00000000932	sar1b	88	30.114	ENSORLG00000008909	arl1	97	30.114
ENSORLG00000000932	sar1b	100	83.333	ENSORLG00000006779	sar1ab	67	83.333
ENSORLG00000000932	sar1b	100	85.859	ENSORLG00000009132	-	90	85.859

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000000932	sar1b	100	85.859	ENSAPOG00000017891	-	100	85.859	Acanthochromis_polyacanthus
ENSORLG00000000932	sar1b	100	91.919	ENSAPOG00000007186	sar1b	100	91.919	Acanthochromis_polyacanthus
ENSORLG00000000932	sar1b	100	84.343	ENSACIG00000024513	-	100	84.343	Amphilophus_citrinellus
ENSORLG00000000932	sar1b	100	92.929	ENSACIG00000013634	sar1b	100	92.929	Amphilophus_citrinellus
ENSORLG00000000932	sar1b	100	91.414	ENSAOCG00000005888	sar1b	100	91.414	Amphiprion_ocellaris
ENSORLG00000000932	sar1b	100	85.859	ENSAOCG00000002627	-	100	85.859	Amphiprion_ocellaris
ENSORLG00000000932	sar1b	100	91.414	ENSAPEG00000022771	sar1b	100	91.414	Amphiprion_percula
ENSORLG00000000932	sar1b	100	85.859	ENSAPEG00000019680	-	100	85.859	Amphiprion_percula
ENSORLG00000000932	sar1b	100	93.434	ENSATEG00000012904	sar1b	100	93.434	Anabas_testudineus
ENSORLG00000000932	sar1b	100	82.828	ENSATEG00000023368	-	100	82.828	Anabas_testudineus
ENSORLG00000000932	sar1b	100	90.404	ENSACAG00000001470	-	100	90.404	Anolis_carolinensis
ENSORLG00000000932	sar1b	100	85.354	ENSACLG00000005011	-	100	85.354	Astatotilapia_calliptera
ENSORLG00000000932	sar1b	100	92.424	ENSACLG00000014649	sar1b	100	92.424	Astatotilapia_calliptera
ENSORLG00000000932	sar1b	59	93.162	ENSAMXG00000018108	sar1b	84	93.162	Astyanax_mexicanus
ENSORLG00000000932	sar1b	100	84.848	ENSAMXG00000034192	-	91	84.848	Astyanax_mexicanus
ENSORLG00000000932	sar1b	100	86.364	ENSCSEG00000015238	sar1b	97	86.364	Cynoglossus_semilaevis
ENSORLG00000000932	sar1b	100	84.343	ENSCSEG00000016976	-	100	84.343	Cynoglossus_semilaevis
ENSORLG00000000932	sar1b	100	93.939	ENSCVAG00000022959	sar1b	100	93.939	Cyprinodon_variegatus
ENSORLG00000000932	sar1b	100	92.929	ENSDARG00000103403	sar1b	100	92.929	Danio_rerio
ENSORLG00000000932	sar1b	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSORLG00000000932	sar1b	97	88.542	ENSEBUG00000011723	sar1b	97	88.542	Eptatretus_burgeri
ENSORLG00000000932	sar1b	100	92.929	ENSELUG00000020912	sar1b	100	92.929	Esox_lucius
ENSORLG00000000932	sar1b	100	93.939	ENSFHEG00000019865	sar1b	100	93.939	Fundulus_heteroclitus
ENSORLG00000000932	sar1b	100	92.929	ENSGMOG00000008023	sar1b	100	92.929	Gadus_morhua
ENSORLG00000000932	sar1b	100	91.414	ENSGAFG00000007081	sar1b	100	91.414	Gambusia_affinis
ENSORLG00000000932	sar1b	100	90.909	ENSGACG00000001474	sar1b	100	90.909	Gasterosteus_aculeatus
ENSORLG00000000932	sar1b	100	92.424	ENSHBUG00000000915	sar1b	100	92.424	Haplochromis_burtoni
ENSORLG00000000932	sar1b	100	85.354	ENSHBUG00000018397	-	100	85.354	Haplochromis_burtoni
ENSORLG00000000932	sar1b	100	92.424	ENSHCOG00000010953	sar1b	100	92.424	Hippocampus_comes
ENSORLG00000000932	sar1b	100	91.414	ENSIPUG00000020925	sar1b	100	91.414	Ictalurus_punctatus
ENSORLG00000000932	sar1b	100	84.848	ENSIPUG00000010046	sar1b	100	84.848	Ictalurus_punctatus
ENSORLG00000000932	sar1b	100	83.838	ENSKMAG00000014875	-	100	83.838	Kryptolebias_marmoratus
ENSORLG00000000932	sar1b	100	92.929	ENSKMAG00000019693	sar1b	100	92.929	Kryptolebias_marmoratus
ENSORLG00000000932	sar1b	100	86.364	ENSLBEG00000016945	-	100	86.364	Labrus_bergylta
ENSORLG00000000932	sar1b	100	89.394	ENSLBEG00000027550	sar1b	100	89.394	Labrus_bergylta
ENSORLG00000000932	sar1b	100	85.859	ENSLACG00000010795	sar1b	100	85.859	Latimeria_chalumnae
ENSORLG00000000932	sar1b	100	72.362	ENSLACG00000017029	-	100	72.362	Latimeria_chalumnae
ENSORLG00000000932	sar1b	100	92.424	ENSLOCG00000010197	sar1b	100	92.424	Lepisosteus_oculatus
ENSORLG00000000932	sar1b	100	89.394	ENSLOCG00000005214	-	100	89.394	Lepisosteus_oculatus
ENSORLG00000000932	sar1b	100	91.919	ENSMAMG00000021732	sar1b	100	91.919	Mastacembelus_armatus
ENSORLG00000000932	sar1b	100	92.424	ENSMZEG00005008942	sar1b	100	92.424	Maylandia_zebra
ENSORLG00000000932	sar1b	100	85.354	ENSMZEG00005001012	-	100	85.354	Maylandia_zebra
ENSORLG00000000932	sar1b	90	91.620	ENSMGAG00000005387	-	91	91.620	Meleagris_gallopavo
ENSORLG00000000932	sar1b	100	84.343	ENSMMOG00000013803	-	100	84.343	Mola_mola
ENSORLG00000000932	sar1b	100	91.919	ENSMALG00000016635	sar1b	97	90.110	Monopterus_albus
ENSORLG00000000932	sar1b	100	85.354	ENSNBRG00000014004	-	100	85.354	Neolamprologus_brichardi
ENSORLG00000000932	sar1b	100	92.929	ENSNBRG00000008013	sar1b	100	92.929	Neolamprologus_brichardi
ENSORLG00000000932	sar1b	100	93.434	ENSONIG00000017278	sar1b	100	93.434	Oreochromis_niloticus
ENSORLG00000000932	sar1b	100	100.000	ENSORLG00020021985	sar1b	100	100.000	Oryzias_latipes_hni
ENSORLG00000000932	sar1b	100	100.000	ENSORLG00015007044	sar1b	100	100.000	Oryzias_latipes_hsok
ENSORLG00000000932	sar1b	100	97.475	ENSOMEG00000001052	sar1b	100	97.475	Oryzias_melastigma
ENSORLG00000000932	sar1b	100	92.929	ENSPKIG00000017353	-	100	92.929	Paramormyrops_kingsleyae
ENSORLG00000000932	sar1b	100	90.909	ENSPKIG00000010688	sar1b	100	90.909	Paramormyrops_kingsleyae
ENSORLG00000000932	sar1b	59	93.966	ENSPMGG00000001234	sar1b	91	93.966	Periophthalmus_magnuspinnatus
ENSORLG00000000932	sar1b	100	85.075	ENSPMAG00000003593	sar1b	100	85.075	Petromyzon_marinus
ENSORLG00000000932	sar1b	100	91.414	ENSPFOG00000005666	sar1b	100	91.414	Poecilia_formosa
ENSORLG00000000932	sar1b	100	91.414	ENSPLAG00000012223	sar1b	100	91.414	Poecilia_latipinna
ENSORLG00000000932	sar1b	59	88.889	ENSPLAG00000001016	-	75	88.889	Poecilia_latipinna
ENSORLG00000000932	sar1b	100	91.414	ENSPMEG00000016831	sar1b	100	91.414	Poecilia_mexicana
ENSORLG00000000932	sar1b	100	91.414	ENSPREG00000005312	sar1b	90	91.414	Poecilia_reticulata
ENSORLG00000000932	sar1b	60	88.136	ENSPREG00000002020	-	87	88.136	Poecilia_reticulata
ENSORLG00000000932	sar1b	100	85.354	ENSPNYG00000021357	-	100	85.354	Pundamilia_nyererei
ENSORLG00000000932	sar1b	100	92.424	ENSPNYG00000012440	sar1b	100	92.424	Pundamilia_nyererei
ENSORLG00000000932	sar1b	100	92.424	ENSPNAG00000014683	sar1b	100	92.424	Pygocentrus_nattereri
ENSORLG00000000932	sar1b	100	85.859	ENSPNAG00000001123	-	100	85.859	Pygocentrus_nattereri
ENSORLG00000000932	sar1b	100	92.929	ENSSFOG00015020051	sar1b	100	92.929	Scleropages_formosus
ENSORLG00000000932	sar1b	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSORLG00000000932	sar1b	100	88.889	ENSSMAG00000007106	sar1b	80	88.889	Scophthalmus_maximus
ENSORLG00000000932	sar1b	100	85.354	ENSSMAG00000002165	-	100	85.354	Scophthalmus_maximus
ENSORLG00000000932	sar1b	100	93.939	ENSSDUG00000020926	sar1b	100	93.939	Seriola_dumerili
ENSORLG00000000932	sar1b	100	85.354	ENSSDUG00000019629	-	100	85.354	Seriola_dumerili
ENSORLG00000000932	sar1b	100	85.354	ENSSLDG00000024197	-	100	85.354	Seriola_lalandi_dorsalis
ENSORLG00000000932	sar1b	100	93.939	ENSSLDG00000017052	sar1b	100	93.939	Seriola_lalandi_dorsalis
ENSORLG00000000932	sar1b	100	89.899	ENSSPUG00000010247	-	100	89.899	Sphenodon_punctatus
ENSORLG00000000932	sar1b	100	92.424	ENSSPAG00000017634	sar1b	100	92.424	Stegastes_partitus
ENSORLG00000000932	sar1b	100	85.354	ENSSPAG00000015626	-	100	85.354	Stegastes_partitus
ENSORLG00000000932	sar1b	100	87.374	ENSTRUG00000023908	sar1b	100	87.374	Takifugu_rubripes
ENSORLG00000000932	sar1b	100	87.879	ENSTNIG00000016097	sar1b	100	87.879	Tetraodon_nigroviridis
ENSORLG00000000932	sar1b	90	90.449	ENSXCOG00000004160	sar1b	87	90.449	Xiphophorus_couchianus
ENSORLG00000000932	sar1b	61	85.833	ENSXCOG00000006154	-	81	85.833	Xiphophorus_couchianus
ENSORLG00000000932	sar1b	100	91.414	ENSXMAG00000008294	sar1b	100	91.414	Xiphophorus_maculatus