EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000001053 (Gene tree)
Gene ID: 101169440
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 5-B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 12809 bases
Position: chr5:3098112-3110920
Accession: 101169440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001300	RRM_1	PF00076.22	1.5e-13	1	1
ENSORLP00000001300	G-patch	PF01585.23	2.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000001301	-	4335	XM_011474652	ENSORLP00000001300	822 (aa)	XP_011472954	H2L656

Gene Model

Click here to download ENSORLG00000001053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000001053	-	86	39.382	ENSORLG00000008657	rbm10	79	38.628
ENSORLG00000001053	-	95	55.781	ENSORLG00000003369	rbm5	99	57.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001053	-	100	55.136	ENSG00000003756	RBM5	100	55.477	Homo_sapiens
ENSORLG00000001053	-	100	71.530	ENSAPOG00000006011	-	100	71.581	Acanthochromis_polyacanthus
ENSORLG00000001053	-	100	57.225	ENSAPOG00000016625	rbm5	100	58.514	Acanthochromis_polyacanthus
ENSORLG00000001053	-	100	55.136	ENSAMEG00000012005	RBM5	100	55.477	Ailuropoda_melanoleuca
ENSORLG00000001053	-	99	66.466	ENSACIG00000021310	-	99	66.827	Amphilophus_citrinellus
ENSORLG00000001053	-	63	64.085	ENSACIG00000007571	rbm5	98	62.953	Amphilophus_citrinellus
ENSORLG00000001053	-	99	65.898	ENSAOCG00000017312	-	99	65.898	Amphiprion_ocellaris
ENSORLG00000001053	-	100	58.009	ENSAOCG00000002880	rbm5	100	58.428	Amphiprion_ocellaris
ENSORLG00000001053	-	91	58.608	ENSAPEG00000011862	rbm5	92	59.068	Amphiprion_percula
ENSORLG00000001053	-	100	71.174	ENSAPEG00000018222	RBM5	100	71.106	Amphiprion_percula
ENSORLG00000001053	-	100	58.065	ENSATEG00000024663	rbm5	100	58.046	Anabas_testudineus
ENSORLG00000001053	-	100	70.567	ENSATEG00000003838	-	100	70.804	Anabas_testudineus
ENSORLG00000001053	-	94	56.391	ENSAPLG00000011176	RBM5	99	56.391	Anas_platyrhynchos
ENSORLG00000001053	-	100	52.607	ENSACAG00000008580	RBM5	100	53.596	Anolis_carolinensis
ENSORLG00000001053	-	100	55.071	ENSANAG00000025199	RBM5	100	55.241	Aotus_nancymaae
ENSORLG00000001053	-	89	92.683	ENSACLG00000024198	RBM5	100	69.240	Astatotilapia_calliptera
ENSORLG00000001053	-	100	57.192	ENSACLG00000012748	rbm5	100	57.745	Astatotilapia_calliptera
ENSORLG00000001053	-	86	61.005	ENSAMXG00000008146	rbm5	100	62.008	Astyanax_mexicanus
ENSORLG00000001053	-	100	55.254	ENSBTAG00000006330	RBM5	100	55.595	Bos_taurus
ENSORLG00000001053	-	100	54.965	ENSCJAG00000004740	RBM5	100	55.307	Callithrix_jacchus
ENSORLG00000001053	-	100	55.018	ENSCAFG00000010866	RBM5	100	55.359	Canis_familiaris
ENSORLG00000001053	-	100	55.018	ENSCAFG00020022126	RBM5	100	55.359	Canis_lupus_dingo
ENSORLG00000001053	-	100	55.136	ENSCHIG00000018435	RBM5	100	55.477	Capra_hircus
ENSORLG00000001053	-	86	52.755	ENSTSYG00000004158	RBM5	100	53.159	Carlito_syrichta
ENSORLG00000001053	-	100	44.233	ENSCAPG00000013495	RBM5	98	63.370	Cavia_aperea
ENSORLG00000001053	-	100	55.083	ENSCPOG00000008151	RBM5	100	55.124	Cavia_porcellus
ENSORLG00000001053	-	99	54.419	ENSCCAG00000026401	RBM5	99	55.397	Cebus_capucinus
ENSORLG00000001053	-	100	55.136	ENSCATG00000041038	RBM5	100	55.477	Cercocebus_atys
ENSORLG00000001053	-	100	55.201	ENSCLAG00000007873	RBM5	100	55.726	Chinchilla_lanigera
ENSORLG00000001053	-	100	55.136	ENSCSAG00000014401	RBM5	100	55.477	Chlorocebus_sabaeus
ENSORLG00000001053	-	83	49.204	ENSCHOG00000009429	RBM5	85	51.749	Choloepus_hoffmanni
ENSORLG00000001053	-	93	56.420	ENSCPBG00000002406	RBM5	100	53.775	Chrysemys_picta_bellii
ENSORLG00000001053	-	100	54.869	ENSCANG00000031250	RBM5	100	55.213	Colobus_angolensis_palliatus
ENSORLG00000001053	-	100	55.042	ENSCGRG00001010543	Rbm5	100	55.556	Cricetulus_griseus_chok1gshd
ENSORLG00000001053	-	100	55.042	ENSCGRG00000008475	Rbm5	100	55.556	Cricetulus_griseus_crigri
ENSORLG00000001053	-	98	56.185	ENSCSEG00000000596	rbm5	97	57.907	Cynoglossus_semilaevis
ENSORLG00000001053	-	100	55.787	ENSCVAG00000005655	rbm5	100	57.657	Cyprinodon_variegatus
ENSORLG00000001053	-	100	50.794	ENSDARG00000098280	rbm5	100	55.629	Danio_rerio
ENSORLG00000001053	-	100	55.018	ENSDNOG00000011756	RBM5	100	55.241	Dasypus_novemcinctus
ENSORLG00000001053	-	100	54.664	ENSDORG00000007692	Rbm5	100	55.176	Dipodomys_ordii
ENSORLG00000001053	-	93	54.172	ENSETEG00000012773	RBM5	93	53.885	Echinops_telfairi
ENSORLG00000001053	-	77	53.806	ENSEBUG00000017034	rbm5	82	56.168	Eptatretus_burgeri
ENSORLG00000001053	-	100	55.018	ENSEASG00005011835	RBM5	100	55.359	Equus_asinus_asinus
ENSORLG00000001053	-	100	55.018	ENSECAG00000020447	RBM5	100	55.359	Equus_caballus
ENSORLG00000001053	-	78	72.680	ENSEEUG00000005943	RBM5	86	72.680	Erinaceus_europaeus
ENSORLG00000001053	-	100	58.447	ENSELUG00000022467	rbm5	100	58.314	Esox_lucius
ENSORLG00000001053	-	100	55.018	ENSFCAG00000014639	RBM5	100	55.241	Felis_catus
ENSORLG00000001053	-	94	56.980	ENSFALG00000008828	RBM5	86	55.610	Ficedula_albicollis
ENSORLG00000001053	-	100	54.748	ENSFDAG00000001897	RBM5	100	55.217	Fukomys_damarensis
ENSORLG00000001053	-	92	78.049	ENSFHEG00000015954	rbm5	100	78.049	Fundulus_heteroclitus
ENSORLG00000001053	-	100	52.273	ENSGMOG00000007810	-	100	51.786	Gadus_morhua
ENSORLG00000001053	-	99	56.690	ENSGMOG00000016224	rbm5	100	56.690	Gadus_morhua
ENSORLG00000001053	-	94	56.873	ENSGALG00000039288	RBM5	84	56.343	Gallus_gallus
ENSORLG00000001053	-	100	56.144	ENSGAFG00000010690	rbm5	100	57.877	Gambusia_affinis
ENSORLG00000001053	-	100	57.278	ENSGACG00000010469	rbm5	100	57.870	Gasterosteus_aculeatus
ENSORLG00000001053	-	100	65.053	ENSGACG00000000858	-	100	64.935	Gasterosteus_aculeatus
ENSORLG00000001053	-	95	52.200	ENSGAGG00000007935	RBM5	99	52.855	Gopherus_agassizii
ENSORLG00000001053	-	100	54.865	ENSGGOG00000014490	RBM5	100	55.205	Gorilla_gorilla
ENSORLG00000001053	-	89	92.683	ENSHBUG00000011901	-	100	69.596	Haplochromis_burtoni
ENSORLG00000001053	-	100	57.192	ENSHBUG00000001941	rbm5	100	57.745	Haplochromis_burtoni
ENSORLG00000001053	-	100	54.684	ENSHGLG00000014844	RBM5	100	55.205	Heterocephalus_glaber_female
ENSORLG00000001053	-	100	55.083	ENSHGLG00100010739	RBM5	100	55.124	Heterocephalus_glaber_male
ENSORLG00000001053	-	96	55.168	ENSHCOG00000017110	rbm5	99	55.836	Hippocampus_comes
ENSORLG00000001053	-	100	57.175	ENSHCOG00000004536	-	100	57.848	Hippocampus_comes
ENSORLG00000001053	-	100	58.617	ENSIPUG00000000640	rbm5	100	59.016	Ictalurus_punctatus
ENSORLG00000001053	-	100	54.782	ENSSTOG00000013856	RBM5	100	55.359	Ictidomys_tridecemlineatus
ENSORLG00000001053	-	100	55.189	ENSJJAG00000008844	Rbm5	100	55.595	Jaculus_jaculus
ENSORLG00000001053	-	100	57.341	ENSKMAG00000006663	rbm5	100	58.844	Kryptolebias_marmoratus
ENSORLG00000001053	-	100	66.746	ENSLBEG00000010877	-	94	66.706	Labrus_bergylta
ENSORLG00000001053	-	57	66.993	ENSLBEG00000002522	-	86	66.993	Labrus_bergylta
ENSORLG00000001053	-	100	57.126	ENSLBEG00000020858	rbm5	100	58.960	Labrus_bergylta
ENSORLG00000001053	-	99	55.359	ENSLACG00000016572	RBM5	100	57.846	Latimeria_chalumnae
ENSORLG00000001053	-	100	56.689	ENSLOCG00000010774	rbm5	100	56.916	Lepisosteus_oculatus
ENSORLG00000001053	-	100	54.835	ENSLAFG00000006733	RBM5	100	55.307	Loxodonta_africana
ENSORLG00000001053	-	100	55.136	ENSMFAG00000031609	RBM5	100	55.477	Macaca_fascicularis
ENSORLG00000001053	-	94	56.654	ENSMMUG00000004921	RBM5	99	55.516	Macaca_mulatta
ENSORLG00000001053	-	100	55.136	ENSMNEG00000044394	RBM5	100	55.477	Macaca_nemestrina
ENSORLG00000001053	-	100	54.697	ENSMLEG00000034689	RBM5	100	54.976	Mandrillus_leucophaeus
ENSORLG00000001053	-	91	75.610	ENSMAMG00000017277	rbm5	99	75.610	Mastacembelus_armatus
ENSORLG00000001053	-	100	70.047	ENSMAMG00000023948	-	100	64.601	Mastacembelus_armatus
ENSORLG00000001053	-	100	69.112	ENSMZEG00005010035	-	100	69.002	Maylandia_zebra
ENSORLG00000001053	-	100	57.192	ENSMZEG00005015328	rbm5	100	57.745	Maylandia_zebra
ENSORLG00000001053	-	93	56.511	ENSMGAG00000003972	RBM5	99	56.511	Meleagris_gallopavo
ENSORLG00000001053	-	94	56.401	ENSMAUG00000020572	Rbm5	98	55.569	Mesocricetus_auratus
ENSORLG00000001053	-	100	55.018	ENSMICG00000016179	RBM5	100	55.359	Microcebus_murinus
ENSORLG00000001053	-	100	54.900	ENSMOCG00000017479	Rbm5	100	55.595	Microtus_ochrogaster
ENSORLG00000001053	-	100	53.446	ENSMMOG00000015342	rbm5	100	53.559	Mola_mola
ENSORLG00000001053	-	91	62.242	ENSMMOG00000021804	-	99	55.357	Mola_mola
ENSORLG00000001053	-	100	55.148	ENSMODG00000012301	RBM5	100	55.569	Monodelphis_domestica
ENSORLG00000001053	-	99	53.373	ENSMALG00000000609	rbm5	99	53.592	Monopterus_albus
ENSORLG00000001053	-	100	69.704	ENSMALG00000016769	-	100	69.632	Monopterus_albus
ENSORLG00000001053	-	100	54.578	MGP_CAROLIEiJ_G0032660	Rbm5	90	71.942	Mus_caroli
ENSORLG00000001053	-	100	54.578	ENSMUSG00000032580	Rbm5	90	71.942	Mus_musculus
ENSORLG00000001053	-	100	54.697	MGP_PahariEiJ_G0015528	Rbm5	90	71.942	Mus_pahari
ENSORLG00000001053	-	100	54.578	MGP_SPRETEiJ_G0033805	Rbm5	94	69.655	Mus_spretus
ENSORLG00000001053	-	100	55.542	ENSMLUG00000007875	RBM5	100	55.241	Myotis_lucifugus
ENSORLG00000001053	-	100	54.976	ENSNGAG00000011777	Rbm5	100	55.621	Nannospalax_galili
ENSORLG00000001053	-	98	62.560	ENSNBRG00000004400	RBM5	99	62.364	Neolamprologus_brichardi
ENSORLG00000001053	-	100	57.078	ENSNBRG00000018097	rbm5	100	57.631	Neolamprologus_brichardi
ENSORLG00000001053	-	100	55.136	ENSNLEG00000006943	RBM5	100	55.477	Nomascus_leucogenys
ENSORLG00000001053	-	88	59.223	ENSMEUG00000012994	RBM5	94	55.784	Notamacropus_eugenii
ENSORLG00000001053	-	93	54.731	ENSOPRG00000015154	RBM5	93	54.569	Ochotona_princeps
ENSORLG00000001053	-	100	52.432	ENSODEG00000019111	-	100	52.824	Octodon_degus
ENSORLG00000001053	-	100	55.201	ENSODEG00000016254	-	100	55.726	Octodon_degus
ENSORLG00000001053	-	100	70.366	ENSONIG00000019007	RBM5	100	70.261	Oreochromis_niloticus
ENSORLG00000001053	-	100	57.029	ENSONIG00000004107	rbm5	100	57.583	Oreochromis_niloticus
ENSORLG00000001053	-	89	57.143	ENSOANG00000006557	RBM5	100	57.124	Ornithorhynchus_anatinus
ENSORLG00000001053	-	100	54.535	ENSOCUG00000011652	RBM5	100	54.888	Oryctolagus_cuniculus
ENSORLG00000001053	-	100	56.834	ENSORLG00020021744	rbm5	100	57.949	Oryzias_latipes_hni
ENSORLG00000001053	-	95	96.688	ENSORLG00020006782	-	98	96.688	Oryzias_latipes_hni
ENSORLG00000001053	-	91	80.488	ENSORLG00015018379	rbm5	99	80.488	Oryzias_latipes_hsok
ENSORLG00000001053	-	95	96.815	ENSORLG00015002854	-	98	96.815	Oryzias_latipes_hsok
ENSORLG00000001053	-	100	56.442	ENSOMEG00000002219	rbm5	100	57.949	Oryzias_melastigma
ENSORLG00000001053	-	83	68.483	ENSOMEG00000010653	-	97	68.483	Oryzias_melastigma
ENSORLG00000001053	-	93	55.243	ENSOGAG00000004205	RBM5	99	54.917	Otolemur_garnettii
ENSORLG00000001053	-	100	55.136	ENSOARG00000010923	RBM5	100	55.477	Ovis_aries
ENSORLG00000001053	-	100	55.136	ENSPPAG00000043010	RBM5	100	55.477	Pan_paniscus
ENSORLG00000001053	-	100	55.018	ENSPPRG00000005404	RBM5	100	55.241	Panthera_pardus
ENSORLG00000001053	-	100	55.018	ENSPTIG00000000962	RBM5	100	55.241	Panthera_tigris_altaica
ENSORLG00000001053	-	100	55.136	ENSPTRG00000014946	RBM5	100	55.477	Pan_troglodytes
ENSORLG00000001053	-	100	55.136	ENSPANG00000018507	RBM5	100	55.477	Papio_anubis
ENSORLG00000001053	-	78	50.075	ENSPKIG00000019187	-	100	50.526	Paramormyrops_kingsleyae
ENSORLG00000001053	-	100	57.422	ENSPKIG00000024837	RBM5	100	57.537	Paramormyrops_kingsleyae
ENSORLG00000001053	-	89	55.851	ENSPSIG00000016073	RBM5	100	56.649	Pelodiscus_sinensis
ENSORLG00000001053	-	88	85.000	ENSPMGG00000004719	-	99	85.366	Periophthalmus_magnuspinnatus
ENSORLG00000001053	-	81	50.898	ENSPMGG00000017347	rbm5	100	51.642	Periophthalmus_magnuspinnatus
ENSORLG00000001053	-	99	40.701	ENSPMAG00000001998	rbm5	99	40.685	Petromyzon_marinus
ENSORLG00000001053	-	100	55.357	ENSPCIG00000021531	RBM5	100	55.740	Phascolarctos_cinereus
ENSORLG00000001053	-	100	56.300	ENSPLAG00000006318	rbm5	100	57.683	Poecilia_latipinna
ENSORLG00000001053	-	75	57.302	ENSPMEG00000008651	rbm5	100	59.200	Poecilia_mexicana
ENSORLG00000001053	-	100	56.150	ENSPMEG00000004295	rbm5	100	58.046	Poecilia_mexicana
ENSORLG00000001053	-	100	56.716	ENSPREG00000003795	rbm5	100	57.537	Poecilia_reticulata
ENSORLG00000001053	-	56	57.965	ENSPCAG00000005459	RBM5	72	58.182	Procavia_capensis
ENSORLG00000001053	-	100	55.018	ENSPCOG00000025840	RBM5	100	55.241	Propithecus_coquereli
ENSORLG00000001053	-	100	53.247	ENSPVAG00000006812	RBM5	100	53.592	Pteropus_vampyrus
ENSORLG00000001053	-	85	70.787	ENSPNYG00000006361	RBM5	99	70.804	Pundamilia_nyererei
ENSORLG00000001053	-	100	57.306	ENSPNYG00000014787	rbm5	100	57.859	Pundamilia_nyererei
ENSORLG00000001053	-	100	57.225	ENSPNAG00000012070	rbm5	100	57.555	Pygocentrus_nattereri
ENSORLG00000001053	-	100	55.107	ENSRNOG00000018153	Rbm5	100	55.896	Rattus_norvegicus
ENSORLG00000001053	-	100	55.279	ENSRBIG00000012679	RBM5	100	55.621	Rhinopithecus_bieti
ENSORLG00000001053	-	100	55.279	ENSRROG00000041331	RBM5	100	55.621	Rhinopithecus_roxellana
ENSORLG00000001053	-	100	55.018	ENSSBOG00000006324	RBM5	100	55.359	Saimiri_boliviensis_boliviensis
ENSORLG00000001053	-	100	54.675	ENSSHAG00000018260	RBM5	100	55.450	Sarcophilus_harrisii
ENSORLG00000001053	-	100	57.714	ENSSFOG00015019645	-	100	60.093	Scleropages_formosus
ENSORLG00000001053	-	100	57.486	ENSSFOG00015019052	rbm5	94	59.400	Scleropages_formosus
ENSORLG00000001053	-	100	57.572	ENSSMAG00000017106	rbm5	100	58.035	Scophthalmus_maximus
ENSORLG00000001053	-	100	57.617	ENSSDUG00000019775	rbm5	100	57.648	Seriola_dumerili
ENSORLG00000001053	-	100	69.421	ENSSLDG00000015996	-	100	69.776	Seriola_lalandi_dorsalis
ENSORLG00000001053	-	100	57.961	ENSSLDG00000002329	rbm5	100	58.076	Seriola_lalandi_dorsalis
ENSORLG00000001053	-	98	54.753	ENSSPUG00000001876	RBM5	89	54.753	Sphenodon_punctatus
ENSORLG00000001053	-	100	57.257	ENSSPAG00000019638	rbm5	100	58.410	Stegastes_partitus
ENSORLG00000001053	-	100	71.293	ENSSPAG00000020011	-	100	71.174	Stegastes_partitus
ENSORLG00000001053	-	93	70.732	ENSSSCG00000011395	RBM5	100	70.732	Sus_scrofa
ENSORLG00000001053	-	94	51.000	ENSTGUG00000006417	RBM5	100	52.206	Taeniopygia_guttata
ENSORLG00000001053	-	100	58.102	ENSTRUG00000008292	rbm5	100	57.937	Takifugu_rubripes
ENSORLG00000001053	-	81	59.857	ENSTNIG00000014742	rbm5	88	59.857	Tetraodon_nigroviridis
ENSORLG00000001053	-	100	49.585	ENSTBEG00000005424	RBM5	100	49.648	Tupaia_belangeri
ENSORLG00000001053	-	100	50.890	ENSTTRG00000007717	RBM5	100	51.124	Tursiops_truncatus
ENSORLG00000001053	-	100	55.136	ENSUAMG00000028347	RBM5	100	55.477	Ursus_americanus
ENSORLG00000001053	-	100	55.136	ENSUMAG00000022027	RBM5	100	55.477	Ursus_maritimus
ENSORLG00000001053	-	90	52.680	ENSVPAG00000009388	RBM5	100	53.064	Vicugna_pacos
ENSORLG00000001053	-	100	55.018	ENSVVUG00000028647	RBM5	100	55.359	Vulpes_vulpes
ENSORLG00000001053	-	100	56.655	ENSXMAG00000016369	rbm5	100	58.046	Xiphophorus_maculatus