EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000001098 (Gene tree)
Gene ID: 101155198
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5249 bases
Position: chr8:2373010-2378258
Accession: 101155198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001357	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000001358	-	633	XM_004071115	ENSORLP00000001357	210 (aa)	XP_004071163	H2L6B1

Gene Model

Click here to download ENSORLG00000001098's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000001098	si:dkey-16l2.16	77	41.718	ENSORLG00000029921	-	76	41.718
ENSORLG00000001098	si:dkey-16l2.16	90	38.916	ENSORLG00000030109	rab33ba	84	38.916
ENSORLG00000001098	si:dkey-16l2.16	56	30.252	ENSORLG00000005005	arl3l2	61	30.252
ENSORLG00000001098	si:dkey-16l2.16	75	44.654	ENSORLG00000013432	rab2a	75	44.654
ENSORLG00000001098	si:dkey-16l2.16	97	39.234	ENSORLG00000013938	rab11bb	96	39.234
ENSORLG00000001098	si:dkey-16l2.16	76	60.248	ENSORLG00000021846	-	80	60.248
ENSORLG00000001098	si:dkey-16l2.16	97	38.278	ENSORLG00000015307	rab11ba	96	38.278
ENSORLG00000001098	si:dkey-16l2.16	73	35.065	ENSORLG00000010115	rab23	78	35.000
ENSORLG00000001098	si:dkey-16l2.16	98	33.493	ENSORLG00000026197	rab6a	98	33.493
ENSORLG00000001098	si:dkey-16l2.16	83	35.000	ENSORLG00000006405	rab9b	85	35.000
ENSORLG00000001098	si:dkey-16l2.16	72	32.484	ENSORLG00000001566	rhebl1	83	32.484
ENSORLG00000001098	si:dkey-16l2.16	73	36.646	ENSORLG00000000937	-	75	36.646
ENSORLG00000001098	si:dkey-16l2.16	94	36.946	ENSORLG00000001351	-	93	36.946
ENSORLG00000001098	si:dkey-16l2.16	88	40.816	ENSORLG00000030642	zgc:101559	84	40.816
ENSORLG00000001098	si:dkey-16l2.16	82	47.701	ENSORLG00000010846	rab15	82	47.701
ENSORLG00000001098	si:dkey-16l2.16	75	43.558	ENSORLG00000030566	rab33a	59	43.558
ENSORLG00000001098	si:dkey-16l2.16	94	35.176	ENSORLG00000027669	RAB41	91	35.176
ENSORLG00000001098	si:dkey-16l2.16	82	41.379	ENSORLG00000003902	rab12	72	41.379
ENSORLG00000001098	si:dkey-16l2.16	100	32.719	ENSORLG00000006628	-	98	32.719
ENSORLG00000001098	si:dkey-16l2.16	95	32.039	ENSORLG00000017806	rab9a	97	32.039
ENSORLG00000001098	si:dkey-16l2.16	98	68.447	ENSORLG00000028885	rab35b	99	68.447
ENSORLG00000001098	si:dkey-16l2.16	94	33.168	ENSORLG00000003119	rab34b	73	33.168
ENSORLG00000001098	si:dkey-16l2.16	80	34.104	ENSORLG00000003681	rheb	90	34.104
ENSORLG00000001098	si:dkey-16l2.16	76	31.902	ENSORLG00000025519	rras	82	31.902
ENSORLG00000001098	si:dkey-16l2.16	84	44.382	ENSORLG00000016555	rab3db	84	44.382
ENSORLG00000001098	si:dkey-16l2.16	70	43.871	ENSORLG00000002071	-	64	43.871
ENSORLG00000001098	si:dkey-16l2.16	83	34.615	ENSORLG00000027892	RAB29	89	34.615
ENSORLG00000001098	si:dkey-16l2.16	98	51.942	ENSORLG00000028104	rab1ab	99	51.942
ENSORLG00000001098	si:dkey-16l2.16	80	38.824	ENSORLG00000014099	si:dkey-34d22.5	77	38.824
ENSORLG00000001098	si:dkey-16l2.16	83	42.938	ENSORLG00000009609	rab18b	86	42.938
ENSORLG00000001098	si:dkey-16l2.16	99	38.679	ENSORLG00000012158	rab25a	99	38.679
ENSORLG00000001098	si:dkey-16l2.16	82	44.253	ENSORLG00000016126	rab11al	81	44.253
ENSORLG00000001098	si:dkey-16l2.16	95	35.500	ENSORLG00000003882	rab5c	89	35.821
ENSORLG00000001098	si:dkey-16l2.16	82	41.714	ENSORLG00000022335	rab42a	80	41.714
ENSORLG00000001098	si:dkey-16l2.16	80	41.667	ENSORLG00000012261	rab5aa	78	41.667
ENSORLG00000001098	si:dkey-16l2.16	95	34.634	ENSORLG00000029090	-	96	34.634
ENSORLG00000001098	si:dkey-16l2.16	82	45.087	ENSORLG00000024116	RAB15	83	45.087
ENSORLG00000001098	si:dkey-16l2.16	86	31.771	ENSORLG00000001134	dnajc27	71	31.771
ENSORLG00000001098	si:dkey-16l2.16	55	30.508	ENSORLG00000029448	arl4aa	61	30.508
ENSORLG00000001098	si:dkey-16l2.16	79	34.731	ENSORLG00000024443	zgc:55558	89	34.731
ENSORLG00000001098	si:dkey-16l2.16	80	44.444	ENSORLG00000004624	rab18a	83	44.444
ENSORLG00000001098	si:dkey-16l2.16	74	33.544	ENSORLG00000018912	hrasb	83	33.544
ENSORLG00000001098	si:dkey-16l2.16	97	39.423	ENSORLG00000018331	RAB11A	96	39.423
ENSORLG00000001098	si:dkey-16l2.16	86	46.154	ENSORLG00000025395	-	91	46.154
ENSORLG00000001098	si:dkey-16l2.16	84	46.629	ENSORLG00000029812	rab30	88	46.629
ENSORLG00000001098	si:dkey-16l2.16	97	40.686	ENSORLG00000016135	rab25b	98	39.899
ENSORLG00000001098	si:dkey-16l2.16	94	32.195	ENSORLG00000004394	rab34a	77	32.195
ENSORLG00000001098	si:dkey-16l2.16	87	31.351	ENSORLG00000024102	kras	95	31.351
ENSORLG00000001098	si:dkey-16l2.16	79	43.787	ENSORLG00000008345	-	79	43.787
ENSORLG00000001098	si:dkey-16l2.16	77	41.463	ENSORLG00000007406	rab14	76	41.463
ENSORLG00000001098	si:dkey-16l2.16	94	36.000	ENSORLG00000024558	-	78	36.000
ENSORLG00000001098	si:dkey-16l2.16	80	30.857	ENSORLG00000025819	-	93	30.857
ENSORLG00000001098	si:dkey-16l2.16	79	37.059	ENSORLG00000016290	rab6bb	86	37.059
ENSORLG00000001098	si:dkey-16l2.16	83	35.556	ENSORLG00000025098	si:dkey-13a21.4	88	35.556
ENSORLG00000001098	si:dkey-16l2.16	73	33.333	ENSORLG00000018119	si:ch73-116o1.2	84	31.111
ENSORLG00000001098	si:dkey-16l2.16	77	43.902	ENSORLG00000001850	RAB39B	77	43.902
ENSORLG00000001098	si:dkey-16l2.16	56	31.496	ENSORLG00000010647	arfrp1	61	31.496
ENSORLG00000001098	si:dkey-16l2.16	77	59.509	ENSORLG00000000602	zgc:171927	77	59.509
ENSORLG00000001098	si:dkey-16l2.16	97	39.713	ENSORLG00000015284	-	69	39.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001098	si:dkey-16l2.16	99	89.952	ENSAPOG00000008263	si:dkey-16l2.16	100	89.952	Acanthochromis_polyacanthus
ENSORLG00000001098	si:dkey-16l2.16	99	90.909	ENSAOCG00000016825	si:dkey-16l2.16	100	90.909	Amphiprion_ocellaris
ENSORLG00000001098	si:dkey-16l2.16	99	90.909	ENSAPEG00000006500	si:dkey-16l2.16	100	90.909	Amphiprion_percula
ENSORLG00000001098	si:dkey-16l2.16	99	85.646	ENSATEG00000019238	si:dkey-16l2.16	100	88.995	Anabas_testudineus
ENSORLG00000001098	si:dkey-16l2.16	99	88.995	ENSACLG00000018721	si:dkey-16l2.16	100	88.995	Astatotilapia_calliptera
ENSORLG00000001098	si:dkey-16l2.16	99	89.474	ENSAMXG00000038243	si:dkey-16l2.16	100	89.474	Astyanax_mexicanus
ENSORLG00000001098	si:dkey-16l2.16	56	93.220	ENSCSEG00000009988	si:dkey-16l2.16	90	93.220	Cynoglossus_semilaevis
ENSORLG00000001098	si:dkey-16l2.16	99	90.431	ENSCVAG00000003537	si:dkey-16l2.16	100	90.431	Cyprinodon_variegatus
ENSORLG00000001098	si:dkey-16l2.16	99	84.211	ENSDARG00000037967	si:dkey-16l2.16	99	94.068	Danio_rerio
ENSORLG00000001098	si:dkey-16l2.16	99	84.058	ENSELUG00000023247	si:dkey-16l2.16	99	84.058	Esox_lucius
ENSORLG00000001098	si:dkey-16l2.16	58	90.909	ENSFHEG00000000767	si:dkey-16l2.16	78	90.909	Fundulus_heteroclitus
ENSORLG00000001098	si:dkey-16l2.16	77	81.481	ENSGMOG00000015174	si:dkey-16l2.16	99	81.481	Gadus_morhua
ENSORLG00000001098	si:dkey-16l2.16	99	84.211	ENSGAFG00000005388	si:dkey-16l2.16	100	84.211	Gambusia_affinis
ENSORLG00000001098	si:dkey-16l2.16	99	89.048	ENSGACG00000014915	si:dkey-16l2.16	98	89.048	Gasterosteus_aculeatus
ENSORLG00000001098	si:dkey-16l2.16	99	89.474	ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	Haplochromis_burtoni
ENSORLG00000001098	si:dkey-16l2.16	99	86.603	ENSHCOG00000006538	si:dkey-16l2.16	100	89.474	Hippocampus_comes
ENSORLG00000001098	si:dkey-16l2.16	99	84.689	ENSKMAG00000003494	si:dkey-16l2.16	100	88.517	Kryptolebias_marmoratus
ENSORLG00000001098	si:dkey-16l2.16	99	90.909	ENSLBEG00000007681	si:dkey-16l2.16	100	90.909	Labrus_bergylta
ENSORLG00000001098	si:dkey-16l2.16	99	88.995	ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	Mastacembelus_armatus
ENSORLG00000001098	si:dkey-16l2.16	99	88.995	ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	Maylandia_zebra
ENSORLG00000001098	si:dkey-16l2.16	98	87.379	ENSMMOG00000020140	si:dkey-16l2.16	97	90.291	Mola_mola
ENSORLG00000001098	si:dkey-16l2.16	100	87.678	ENSMALG00000014727	si:dkey-16l2.16	100	87.678	Monopterus_albus
ENSORLG00000001098	si:dkey-16l2.16	99	88.517	ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	Neolamprologus_brichardi
ENSORLG00000001098	si:dkey-16l2.16	99	88.995	ENSONIG00000009443	si:dkey-16l2.16	100	88.995	Oreochromis_niloticus
ENSORLG00000001098	si:dkey-16l2.16	100	100.000	ENSORLG00020000867	si:dkey-16l2.16	100	100.000	Oryzias_latipes_hni
ENSORLG00000001098	si:dkey-16l2.16	99	96.635	ENSOMEG00000015474	si:dkey-16l2.16	100	96.635	Oryzias_melastigma
ENSORLG00000001098	si:dkey-16l2.16	99	77.033	ENSPKIG00000018888	si:dkey-16l2.16	100	77.033	Paramormyrops_kingsleyae
ENSORLG00000001098	si:dkey-16l2.16	99	84.211	ENSPKIG00000005686	-	100	87.560	Paramormyrops_kingsleyae
ENSORLG00000001098	si:dkey-16l2.16	99	87.560	ENSPMGG00000000751	si:dkey-16l2.16	100	90.431	Periophthalmus_magnuspinnatus
ENSORLG00000001098	si:dkey-16l2.16	99	85.167	ENSPFOG00000004746	si:dkey-16l2.16	100	85.167	Poecilia_formosa
ENSORLG00000001098	si:dkey-16l2.16	99	84.689	ENSPLAG00000021043	si:dkey-16l2.16	100	84.689	Poecilia_latipinna
ENSORLG00000001098	si:dkey-16l2.16	99	85.167	ENSPMEG00000007165	si:dkey-16l2.16	100	85.167	Poecilia_mexicana
ENSORLG00000001098	si:dkey-16l2.16	99	84.689	ENSPREG00000005323	si:dkey-16l2.16	100	84.689	Poecilia_reticulata
ENSORLG00000001098	si:dkey-16l2.16	99	89.474	ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	Pundamilia_nyererei
ENSORLG00000001098	si:dkey-16l2.16	99	89.474	ENSPNAG00000018986	si:dkey-16l2.16	100	89.474	Pygocentrus_nattereri
ENSORLG00000001098	si:dkey-16l2.16	99	75.845	ENSSFOG00015006414	-	99	75.845	Scleropages_formosus
ENSORLG00000001098	si:dkey-16l2.16	99	87.560	ENSSFOG00015021448	-	100	87.560	Scleropages_formosus
ENSORLG00000001098	si:dkey-16l2.16	99	79.524	ENSSMAG00000011769	si:dkey-16l2.16	94	83.333	Scophthalmus_maximus
ENSORLG00000001098	si:dkey-16l2.16	99	89.952	ENSSDUG00000005719	si:dkey-16l2.16	100	89.952	Seriola_dumerili
ENSORLG00000001098	si:dkey-16l2.16	99	89.952	ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	Seriola_lalandi_dorsalis
ENSORLG00000001098	si:dkey-16l2.16	99	90.909	ENSSPAG00000006302	si:dkey-16l2.16	100	90.909	Stegastes_partitus
ENSORLG00000001098	si:dkey-16l2.16	99	88.995	ENSTRUG00000025076	si:dkey-16l2.16	94	95.798	Takifugu_rubripes
ENSORLG00000001098	si:dkey-16l2.16	99	89.952	ENSTNIG00000011300	si:dkey-16l2.16	100	89.952	Tetraodon_nigroviridis
ENSORLG00000001098	si:dkey-16l2.16	99	84.689	ENSXMAG00000021767	si:dkey-16l2.16	100	84.689	Xiphophorus_maculatus