EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000001230 (Gene tree)
Gene ID: 101163660
Gene Symbol: srsf2b
Alias: -
Full Name: serine/arginine-rich splicing factor 2
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4328 bases
Position: chr8:2675402-2679729
Accession: 101163660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001513	RRM_1	PF00076.22	4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000001514	-	3190	XM_011477771	ENSORLP00000001513	211 (aa)	XP_011476073	H2L6R1

Gene Model

Click here to download ENSORLG00000001230's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03040	Spliceosome	KEGG
ola05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001230's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001230	srsf2b	68	74.126	ENSG00000161547	SRSF2	75	92.784	Homo_sapiens
ENSORLG00000001230	srsf2b	57	85.000	ENSDARG00000057484	srsf2a	82	94.845	Danio_rerio
ENSORLG00000001230	srsf2b	73	68.182	ENSDORG00000014460	Srsf2	50	87.255	Dipodomys_ordii
ENSORLG00000001230	srsf2b	50	90.476	ENSKMAG00000009464	srsf2a	78	62.570	Kryptolebias_marmoratus
ENSORLG00000001230	srsf2b	100	99.526	ENSORLG00020014420	srsf2b	100	99.526	Oryzias_latipes_hni
ENSORLG00000001230	srsf2b	100	98.578	ENSORLG00015007643	srsf2b	100	98.578	Oryzias_latipes_hsok
ENSORLG00000001230	srsf2b	65	74.638	ENSPMGG00000006860	-	58	94.845	Periophthalmus_magnuspinnatus