EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000001280 (Gene tree)
Gene ID: 101163092
Gene Symbol: trmt12
Alias: -
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6510 bases
Position: chr10:10069924-10076433
Accession: 101163092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001574	MTS	PF05175.14	1.9e-06	1	1
ENSORLP00000001574	Met_10	PF02475.16	2.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000001575	-	3456	XM_004073094	ENSORLP00000001574	396 (aa)	XP_004073142	H2L6W7

Gene Model

Click here to download ENSORLG00000001280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001280	trmt12	96	50.847	ENSG00000183665	TRMT12	92	50.363	Homo_sapiens
ENSORLG00000001280	trmt12	100	75.312	ENSAPOG00000011979	trmt12	100	75.312	Acanthochromis_polyacanthus
ENSORLG00000001280	trmt12	96	52.300	ENSAMEG00000019612	TRMT12	92	52.058	Ailuropoda_melanoleuca
ENSORLG00000001280	trmt12	95	73.560	ENSACIG00000012982	trmt12	99	73.560	Amphilophus_citrinellus
ENSORLG00000001280	trmt12	100	74.813	ENSAOCG00000020570	trmt12	100	74.813	Amphiprion_ocellaris
ENSORLG00000001280	trmt12	100	75.062	ENSAPEG00000006335	trmt12	100	75.062	Amphiprion_percula
ENSORLG00000001280	trmt12	100	71.921	ENSATEG00000018316	trmt12	100	71.921	Anabas_testudineus
ENSORLG00000001280	trmt12	100	72.818	ENSACLG00000001008	trmt12	100	72.818	Astatotilapia_calliptera
ENSORLG00000001280	trmt12	99	54.286	ENSAMXG00000040366	trmt12	99	54.048	Astyanax_mexicanus
ENSORLG00000001280	trmt12	96	51.449	ENSBTAG00000020398	TRMT12	89	51.208	Bos_taurus
ENSORLG00000001280	trmt12	54	38.605	WBGene00009586	F40F9.10	57	35.206	Caenorhabditis_elegans
ENSORLG00000001280	trmt12	96	49.395	ENSCJAG00000022174	TRMT12	92	48.910	Callithrix_jacchus
ENSORLG00000001280	trmt12	96	51.574	ENSCAFG00000001040	TRMT12	94	51.332	Canis_familiaris
ENSORLG00000001280	trmt12	96	51.574	ENSCAFG00020006500	TRMT12	94	51.332	Canis_lupus_dingo
ENSORLG00000001280	trmt12	96	51.942	ENSCHIG00000016574	TRMT12	94	51.699	Capra_hircus
ENSORLG00000001280	trmt12	96	50.605	ENSCPOG00000026520	TRMT12	93	50.847	Cavia_porcellus
ENSORLG00000001280	trmt12	96	51.090	ENSCSAG00000018615	TRMT12	92	50.605	Chlorocebus_sabaeus
ENSORLG00000001280	trmt12	99	51.954	ENSCPBG00000014290	TRMT12	95	51.494	Chrysemys_picta_bellii
ENSORLG00000001280	trmt12	72	49.141	ENSCING00000019633	-	97	49.141	Ciona_intestinalis
ENSORLG00000001280	trmt12	75	51.171	ENSCSAVG00000000415	-	94	51.342	Ciona_savignyi
ENSORLG00000001280	trmt12	74	59.532	ENSCGRG00001014834	Trmt12	71	59.532	Cricetulus_griseus_chok1gshd
ENSORLG00000001280	trmt12	99	63.725	ENSCSEG00000002675	trmt12	95	62.500	Cynoglossus_semilaevis
ENSORLG00000001280	trmt12	100	70.250	ENSCVAG00000005590	trmt12	100	68.500	Cyprinodon_variegatus
ENSORLG00000001280	trmt12	99	57.002	ENSDARG00000060338	trmt12	99	57.002	Danio_rerio
ENSORLG00000001280	trmt12	96	48.675	ENSETEG00000009373	TRMT12	92	48.193	Echinops_telfairi
ENSORLG00000001280	trmt12	96	52.300	ENSEASG00005022441	TRMT12	94	52.058	Equus_asinus_asinus
ENSORLG00000001280	trmt12	96	49.758	ENSEEUG00000004844	TRMT12	93	49.758	Erinaceus_europaeus
ENSORLG00000001280	trmt12	99	60.591	ENSELUG00000004240	trmt12	99	61.559	Esox_lucius
ENSORLG00000001280	trmt12	65	60.142	ENSFALG00000003825	TRMT12	98	65.888	Ficedula_albicollis
ENSORLG00000001280	trmt12	96	50.847	ENSFDAG00000016647	TRMT12	94	50.605	Fukomys_damarensis
ENSORLG00000001280	trmt12	93	62.198	ENSFHEG00000017338	trmt12	96	62.198	Fundulus_heteroclitus
ENSORLG00000001280	trmt12	79	60.534	ENSGALG00000006773	TRMT12	71	61.420	Gallus_gallus
ENSORLG00000001280	trmt12	100	71.144	ENSGAFG00000020056	trmt12	100	69.900	Gambusia_affinis
ENSORLG00000001280	trmt12	95	68.668	ENSGACG00000017351	trmt12	99	67.102	Gasterosteus_aculeatus
ENSORLG00000001280	trmt12	99	51.852	ENSGAGG00000006032	TRMT12	97	51.389	Gopherus_agassizii
ENSORLG00000001280	trmt12	100	72.569	ENSHBUG00000016412	trmt12	100	72.569	Haplochromis_burtoni
ENSORLG00000001280	trmt12	96	50.120	ENSHGLG00000020498	TRMT12	94	50.121	Heterocephalus_glaber_female
ENSORLG00000001280	trmt12	96	50.120	ENSHGLG00100020132	TRMT12	94	50.121	Heterocephalus_glaber_male
ENSORLG00000001280	trmt12	100	67.085	ENSHCOG00000005050	trmt12	94	73.457	Hippocampus_comes
ENSORLG00000001280	trmt12	99	56.650	ENSIPUG00000018011	trmt12	92	56.650	Ictalurus_punctatus
ENSORLG00000001280	trmt12	96	49.519	ENSSTOG00000030617	TRMT12	94	49.161	Ictidomys_tridecemlineatus
ENSORLG00000001280	trmt12	99	71.750	ENSKMAG00000000891	trmt12	99	71.750	Kryptolebias_marmoratus
ENSORLG00000001280	trmt12	54	75.688	ENSLBEG00000017456	-	89	75.688	Labrus_bergylta
ENSORLG00000001280	trmt12	100	66.915	ENSLBEG00000028712	trmt12	100	66.915	Labrus_bergylta
ENSORLG00000001280	trmt12	97	53.222	ENSLACG00000015869	TRMT12	94	52.745	Latimeria_chalumnae
ENSORLG00000001280	trmt12	99	55.665	ENSLOCG00000015290	trmt12	99	55.665	Lepisosteus_oculatus
ENSORLG00000001280	trmt12	96	52.058	ENSLAFG00000012519	TRMT12	94	51.816	Loxodonta_africana
ENSORLG00000001280	trmt12	96	50.605	ENSMMUG00000015490	TRMT12	93	50.121	Macaca_mulatta
ENSORLG00000001280	trmt12	99	67.813	ENSMAMG00000020311	trmt12	99	67.813	Mastacembelus_armatus
ENSORLG00000001280	trmt12	100	72.070	ENSMZEG00005007349	trmt12	100	72.070	Maylandia_zebra
ENSORLG00000001280	trmt12	99	51.300	ENSMGAG00000004174	TRMT12	95	51.773	Meleagris_gallopavo
ENSORLG00000001280	trmt12	99	71.464	ENSMMOG00000000412	trmt12	99	71.464	Mola_mola
ENSORLG00000001280	trmt12	96	50.750	ENSMODG00000011798	-	84	50.500	Monodelphis_domestica
ENSORLG00000001280	trmt12	96	52.750	ENSMODG00000021403	-	92	52.750	Monodelphis_domestica
ENSORLG00000001280	trmt12	100	72.099	ENSMALG00000008668	trmt12	100	72.099	Monopterus_albus
ENSORLG00000001280	trmt12	96	49.880	MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	Mus_caroli
ENSORLG00000001280	trmt12	96	50.361	ENSMUSG00000037085	Trmt12	92	50.483	Mus_musculus
ENSORLG00000001280	trmt12	96	52.174	MGP_PahariEiJ_G0019829	Trmt12	93	51.932	Mus_pahari
ENSORLG00000001280	trmt12	96	50.242	MGP_SPRETEiJ_G0020717	Trmt12	92	50.242	Mus_spretus
ENSORLG00000001280	trmt12	96	51.816	ENSMPUG00000019150	TRMT12	93	51.574	Mustela_putorius_furo
ENSORLG00000001280	trmt12	96	50.605	ENSMLUG00000003753	TRMT12	94	50.363	Myotis_lucifugus
ENSORLG00000001280	trmt12	96	49.275	ENSNGAG00000014548	Trmt12	95	49.034	Nannospalax_galili
ENSORLG00000001280	trmt12	100	71.859	ENSNBRG00000021510	trmt12	100	71.859	Neolamprologus_brichardi
ENSORLG00000001280	trmt12	96	48.058	ENSOPRG00000008067	TRMT12	92	48.301	Ochotona_princeps
ENSORLG00000001280	trmt12	96	51.574	ENSODEG00000018933	TRMT12	94	51.332	Octodon_degus
ENSORLG00000001280	trmt12	100	74.813	ENSONIG00000002614	trmt12	100	74.813	Oreochromis_niloticus
ENSORLG00000001280	trmt12	96	46.437	ENSOANG00000009987	TRMT12	95	45.946	Ornithorhynchus_anatinus
ENSORLG00000001280	trmt12	96	47.837	ENSOCUG00000026379	TRMT12	92	47.596	Oryctolagus_cuniculus
ENSORLG00000001280	trmt12	100	97.727	ENSORLG00020000708	trmt12	100	97.727	Oryzias_latipes_hni
ENSORLG00000001280	trmt12	100	97.727	ENSORLG00015012344	trmt12	100	97.727	Oryzias_latipes_hsok
ENSORLG00000001280	trmt12	100	86.364	ENSOMEG00000015267	trmt12	98	86.364	Oryzias_melastigma
ENSORLG00000001280	trmt12	96	51.691	ENSOGAG00000015845	TRMT12	94	51.449	Otolemur_garnettii
ENSORLG00000001280	trmt12	99	58.911	ENSPKIG00000004640	trmt12	99	58.911	Paramormyrops_kingsleyae
ENSORLG00000001280	trmt12	59	60.595	ENSPSIG00000003476	TRMT12	99	60.595	Pelodiscus_sinensis
ENSORLG00000001280	trmt12	99	63.524	ENSPMGG00000016356	trmt12	97	63.524	Periophthalmus_magnuspinnatus
ENSORLG00000001280	trmt12	96	53.250	ENSPCIG00000002967	TRMT12	85	52.500	Phascolarctos_cinereus
ENSORLG00000001280	trmt12	98	67.430	ENSPFOG00000016931	trmt12	97	66.158	Poecilia_formosa
ENSORLG00000001280	trmt12	100	68.250	ENSPLAG00000020621	trmt12	100	68.250	Poecilia_latipinna
ENSORLG00000001280	trmt12	100	69.576	ENSPMEG00000000818	trmt12	100	68.329	Poecilia_mexicana
ENSORLG00000001280	trmt12	100	70.426	ENSPREG00000011621	trmt12	100	69.173	Poecilia_reticulata
ENSORLG00000001280	trmt12	96	50.605	ENSPPYG00000018866	TRMT12	92	50.121	Pongo_abelii
ENSORLG00000001280	trmt12	96	51.691	ENSPCAG00000000556	TRMT12	93	51.208	Procavia_capensis
ENSORLG00000001280	trmt12	96	51.574	ENSPVAG00000009149	TRMT12	93	51.332	Pteropus_vampyrus
ENSORLG00000001280	trmt12	95	72.513	ENSPNYG00000010696	trmt12	99	72.513	Pundamilia_nyererei
ENSORLG00000001280	trmt12	99	54.654	ENSPNAG00000019028	trmt12	99	54.654	Pygocentrus_nattereri
ENSORLG00000001280	trmt12	96	52.058	ENSRNOG00000008978	Trmt12	95	51.816	Rattus_norvegicus
ENSORLG00000001280	trmt12	96	52.000	ENSSHAG00000003345	TRMT12	92	51.250	Sarcophilus_harrisii
ENSORLG00000001280	trmt12	99	56.731	ENSSFOG00015006090	trmt12	99	56.250	Scleropages_formosus
ENSORLG00000001280	trmt12	99	71.535	ENSSMAG00000013247	trmt12	99	69.554	Scophthalmus_maximus
ENSORLG00000001280	trmt12	100	73.827	ENSSDUG00000006168	trmt12	100	73.827	Seriola_dumerili
ENSORLG00000001280	trmt12	100	73.333	ENSSLDG00000025007	trmt12	100	73.333	Seriola_lalandi_dorsalis
ENSORLG00000001280	trmt12	97	51.522	ENSSPUG00000005321	TRMT12	94	51.522	Sphenodon_punctatus
ENSORLG00000001280	trmt12	100	75.312	ENSSPAG00000009435	trmt12	97	75.312	Stegastes_partitus
ENSORLG00000001280	trmt12	99	50.847	ENSTGUG00000002280	TRMT12	99	51.332	Taeniopygia_guttata
ENSORLG00000001280	trmt12	99	66.169	ENSTRUG00000011548	trmt12	99	66.169	Takifugu_rubripes
ENSORLG00000001280	trmt12	99	66.337	ENSTNIG00000016866	trmt12	99	66.089	Tetraodon_nigroviridis
ENSORLG00000001280	trmt12	96	52.300	ENSUAMG00000002067	TRMT12	95	52.058	Ursus_americanus
ENSORLG00000001280	trmt12	96	51.325	ENSVPAG00000006519	TRMT12	93	51.084	Vicugna_pacos
ENSORLG00000001280	trmt12	97	50.957	ENSVVUG00000016790	TRMT12	93	50.718	Vulpes_vulpes
ENSORLG00000001280	trmt12	99	53.133	ENSXETG00000009641	trmt12	95	52.632	Xenopus_tropicalis
ENSORLG00000001280	trmt12	100	69.975	ENSXCOG00000016505	trmt12	100	68.486	Xiphophorus_couchianus
ENSORLG00000001280	trmt12	100	70.896	ENSXMAG00000025318	trmt12	100	69.403	Xiphophorus_maculatus