EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000001427 (Gene tree)
Gene ID: 101162305
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase I subunit RPA34
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4894 bases
Position: chr13:3732546-3737439
Accession: 101162305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001763	RNA_polI_A34	PF08208.11	2.8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000001764	-	882	XM_004075243	ENSORLP00000001763	293 (aa)	XP_004075291	H2L7F1

Gene Model

Click here to download ENSORLG00000001427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001427	-	67	62.439	ENSAPOG00000001121	cd3eap	85	50.327	Acanthochromis_polyacanthus
ENSORLG00000001427	-	88	38.870	ENSACIG00000007610	-	89	43.816	Amphilophus_citrinellus
ENSORLG00000001427	-	67	61.084	ENSAOCG00000007088	cd3eap	53	63.830	Amphiprion_ocellaris
ENSORLG00000001427	-	67	61.084	ENSAPEG00000016153	cd3eap	53	63.830	Amphiprion_percula
ENSORLG00000001427	-	68	59.070	ENSATEG00000006485	cd3eap	96	48.657	Anabas_testudineus
ENSORLG00000001427	-	81	52.045	ENSACLG00000018258	cd3eap	93	49.231	Astatotilapia_calliptera
ENSORLG00000001427	-	83	32.491	ENSCPBG00000014383	-	96	31.206	Chrysemys_picta_bellii
ENSORLG00000001427	-	67	53.922	ENSCSEG00000005914	cd3eap	50	57.368	Cynoglossus_semilaevis
ENSORLG00000001427	-	93	49.235	ENSCVAG00000000356	cd3eap	96	48.225	Cyprinodon_variegatus
ENSORLG00000001427	-	66	44.444	ENSELUG00000012387	cd3eap	56	47.458	Esox_lucius
ENSORLG00000001427	-	83	44.863	ENSFHEG00000020394	-	90	44.884	Fundulus_heteroclitus
ENSORLG00000001427	-	97	46.933	ENSGAFG00000003667	cd3eap	95	46.933	Gambusia_affinis
ENSORLG00000001427	-	58	55.738	ENSGACG00000012623	cd3eap	77	56.614	Gasterosteus_aculeatus
ENSORLG00000001427	-	81	52.045	ENSHBUG00000001063	cd3eap	93	49.231	Haplochromis_burtoni
ENSORLG00000001427	-	63	48.663	ENSHCOG00000019142	-	77	45.299	Hippocampus_comes
ENSORLG00000001427	-	80	53.668	ENSKMAG00000015084	cd3eap	96	48.125	Kryptolebias_marmoratus
ENSORLG00000001427	-	53	41.290	ENSLOCG00000014803	cd3eap	50	41.290	Lepisosteus_oculatus
ENSORLG00000001427	-	81	52.308	ENSMAMG00000016319	cd3eap	97	48.024	Mastacembelus_armatus
ENSORLG00000001427	-	81	52.632	ENSMZEG00005024408	cd3eap	93	50.311	Maylandia_zebra
ENSORLG00000001427	-	53	59.375	ENSMALG00000010452	cd3eap	94	45.538	Monopterus_albus
ENSORLG00000001427	-	81	52.060	ENSNBRG00000016766	cd3eap	93	49.226	Neolamprologus_brichardi
ENSORLG00000001427	-	99	94.295	ENSORLG00020019155	-	100	94.295	Oryzias_latipes_hni
ENSORLG00000001427	-	95	74.587	ENSOMEG00000022922	cd3eap	98	74.448	Oryzias_melastigma
ENSORLG00000001427	-	81	51.600	ENSPFOG00000016410	cd3eap	100	49.451	Poecilia_formosa
ENSORLG00000001427	-	97	46.626	ENSPLAG00000023890	cd3eap	95	47.239	Poecilia_latipinna
ENSORLG00000001427	-	97	47.095	ENSPMEG00000019111	cd3eap	95	47.401	Poecilia_mexicana
ENSORLG00000001427	-	70	55.046	ENSPREG00000018959	-	94	46.828	Poecilia_reticulata
ENSORLG00000001427	-	81	52.045	ENSPNYG00000022270	cd3eap	93	49.231	Pundamilia_nyererei
ENSORLG00000001427	-	68	42.786	ENSPNAG00000005779	cd3eap	50	46.835	Pygocentrus_nattereri
ENSORLG00000001427	-	57	38.636	ENSSFOG00015004233	cd3eap	54	40.667	Scleropages_formosus
ENSORLG00000001427	-	81	54.264	ENSSMAG00000020182	cd3eap	94	47.962	Scophthalmus_maximus
ENSORLG00000001427	-	68	55.556	ENSSDUG00000001874	cd3eap	96	47.720	Seriola_dumerili
ENSORLG00000001427	-	68	55.093	ENSSLDG00000003180	cd3eap	96	47.416	Seriola_lalandi_dorsalis
ENSORLG00000001427	-	66	57.576	ENSSPAG00000014760	-	58	61.376	Stegastes_partitus
ENSORLG00000001427	-	84	45.890	ENSXCOG00000009736	cd3eap	96	46.233	Xiphophorus_couchianus
ENSORLG00000001427	-	94	45.152	ENSXMAG00000013127	cd3eap	95	48.171	Xiphophorus_maculatus