EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000001434 (Gene tree)
Gene ID: 101168798
Gene Symbol: ddx56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 15806 bases
Position: chr12:2400317-2416122
Accession: 101168798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001771	ResIII	PF04851.15	2.6e-08	1	1
ENSORLP00000001771	DEAD	PF00270.29	7.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000001772	-	6193	XM_004074479	ENSORLP00000001771	558 (aa)	XP_004074527	H2L7F9

Gene Model

Click here to download ENSORLG00000001434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000001434	ddx56	71	33.333	ENSORLG00000015021	ddx47	73	33.333
ENSORLG00000001434	ddx56	72	43.548	ENSORLG00000004581	ddx24	50	43.548
ENSORLG00000001434	ddx56	74	33.094	ENSORLG00000013059	ddx27	51	33.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001434	ddx56	97	66.300	ENSG00000136271	DDX56	99	68.351	Homo_sapiens
ENSORLG00000001434	ddx56	100	85.205	ENSAPOG00000017113	ddx56	100	85.383	Acanthochromis_polyacanthus
ENSORLG00000001434	ddx56	98	64.428	ENSAMEG00000017711	DDX56	98	64.973	Ailuropoda_melanoleuca
ENSORLG00000001434	ddx56	95	70.654	ENSACIG00000013747	ddx56	99	81.868	Amphilophus_citrinellus
ENSORLG00000001434	ddx56	87	88.296	ENSAOCG00000015447	-	87	88.296	Amphiprion_ocellaris
ENSORLG00000001434	ddx56	89	88.200	ENSAOCG00000018059	ddx56	94	88.200	Amphiprion_ocellaris
ENSORLG00000001434	ddx56	100	85.305	ENSAPEG00000007267	ddx56	100	85.305	Amphiprion_percula
ENSORLG00000001434	ddx56	98	84.058	ENSATEG00000005279	ddx56	99	84.448	Anabas_testudineus
ENSORLG00000001434	ddx56	100	80.357	ENSACLG00000020113	ddx56	100	81.071	Astatotilapia_calliptera
ENSORLG00000001434	ddx56	99	73.429	ENSAMXG00000019357	ddx56	99	73.609	Astyanax_mexicanus
ENSORLG00000001434	ddx56	99	65.412	ENSBTAG00000010602	DDX56	99	65.771	Bos_taurus
ENSORLG00000001434	ddx56	97	38.434	WBGene00016073	C24H12.4	86	38.434	Caenorhabditis_elegans
ENSORLG00000001434	ddx56	97	66.300	ENSCJAG00000012233	DDX56	97	66.300	Callithrix_jacchus
ENSORLG00000001434	ddx56	81	62.198	ENSCAFG00000029295	DDX56	99	62.857	Canis_familiaris
ENSORLG00000001434	ddx56	98	62.976	ENSCAFG00020019695	DDX56	98	62.976	Canis_lupus_dingo
ENSORLG00000001434	ddx56	99	65.591	ENSCHIG00000014261	DDX56	99	65.591	Capra_hircus
ENSORLG00000001434	ddx56	91	69.094	ENSTSYG00000008048	DDX56	97	66.239	Carlito_syrichta
ENSORLG00000001434	ddx56	86	63.900	ENSCAPG00000006286	DDX56	99	63.711	Cavia_aperea
ENSORLG00000001434	ddx56	99	65.233	ENSCPOG00000003359	DDX56	99	65.233	Cavia_porcellus
ENSORLG00000001434	ddx56	91	68.307	ENSCCAG00000025303	DDX56	97	65.751	Cebus_capucinus
ENSORLG00000001434	ddx56	97	65.688	ENSCATG00000039389	DDX56	97	65.688	Cercocebus_atys
ENSORLG00000001434	ddx56	99	64.557	ENSCLAG00000007666	DDX56	99	64.557	Chinchilla_lanigera
ENSORLG00000001434	ddx56	97	65.872	ENSCSAG00000015636	DDX56	97	65.872	Chlorocebus_sabaeus
ENSORLG00000001434	ddx56	99	69.245	ENSCPBG00000024556	DDX56	99	69.245	Chrysemys_picta_bellii
ENSORLG00000001434	ddx56	90	60.827	ENSCING00000005185	-	98	61.220	Ciona_intestinalis
ENSORLG00000001434	ddx56	89	59.519	ENSCSAVG00000011266	-	99	60.120	Ciona_savignyi
ENSORLG00000001434	ddx56	97	65.688	ENSCANG00000028187	DDX56	97	65.688	Colobus_angolensis_palliatus
ENSORLG00000001434	ddx56	98	66.120	ENSCGRG00001019019	Ddx56	98	66.120	Cricetulus_griseus_chok1gshd
ENSORLG00000001434	ddx56	98	66.120	ENSCGRG00000011870	Ddx56	98	66.120	Cricetulus_griseus_crigri
ENSORLG00000001434	ddx56	100	79.929	ENSCSEG00000008368	ddx56	100	80.639	Cynoglossus_semilaevis
ENSORLG00000001434	ddx56	100	85.842	ENSCVAG00000006499	ddx56	100	85.842	Cyprinodon_variegatus
ENSORLG00000001434	ddx56	99	78.853	ENSDARG00000020913	ddx56	99	79.032	Danio_rerio
ENSORLG00000001434	ddx56	87	63.918	ENSDNOG00000036526	DDX56	99	63.918	Dasypus_novemcinctus
ENSORLG00000001434	ddx56	96	51.107	FBgn0001565	Hlc	96	51.107	Drosophila_melanogaster
ENSORLG00000001434	ddx56	85	45.929	ENSETEG00000019559	-	100	45.929	Echinops_telfairi
ENSORLG00000001434	ddx56	73	57.946	ENSETEG00000002969	-	74	57.946	Echinops_telfairi
ENSORLG00000001434	ddx56	97	66.062	ENSEBUG00000009986	ddx56	99	66.969	Eptatretus_burgeri
ENSORLG00000001434	ddx56	98	64.610	ENSEASG00005017795	DDX56	98	64.791	Equus_asinus_asinus
ENSORLG00000001434	ddx56	98	64.428	ENSECAG00000019897	DDX56	98	64.610	Equus_caballus
ENSORLG00000001434	ddx56	78	68.337	ENSEEUG00000004849	DDX56	92	68.337	Erinaceus_europaeus
ENSORLG00000001434	ddx56	100	80.287	ENSELUG00000004150	ddx56	100	80.570	Esox_lucius
ENSORLG00000001434	ddx56	98	64.428	ENSFCAG00000010261	DDX56	98	64.791	Felis_catus
ENSORLG00000001434	ddx56	99	64.516	ENSFDAG00000007128	DDX56	99	64.516	Fukomys_damarensis
ENSORLG00000001434	ddx56	100	82.616	ENSFHEG00000018008	ddx56	97	86.561	Fundulus_heteroclitus
ENSORLG00000001434	ddx56	100	76.523	ENSGAFG00000006906	ddx56	99	76.523	Gambusia_affinis
ENSORLG00000001434	ddx56	94	71.347	ENSGAGG00000006789	DDX56	93	71.347	Gopherus_agassizii
ENSORLG00000001434	ddx56	97	66.300	ENSGGOG00000012031	DDX56	97	66.300	Gorilla_gorilla
ENSORLG00000001434	ddx56	95	76.548	ENSHBUG00000015246	ddx56	96	77.298	Haplochromis_burtoni
ENSORLG00000001434	ddx56	99	63.978	ENSHGLG00000017271	DDX56	99	63.978	Heterocephalus_glaber_female
ENSORLG00000001434	ddx56	99	63.978	ENSHGLG00100015731	DDX56	99	63.978	Heterocephalus_glaber_male
ENSORLG00000001434	ddx56	99	80.866	ENSHCOG00000001685	ddx56	99	80.866	Hippocampus_comes
ENSORLG00000001434	ddx56	99	74.686	ENSIPUG00000006602	ddx56	96	75.224	Ictalurus_punctatus
ENSORLG00000001434	ddx56	99	65.233	ENSSTOG00000000464	DDX56	99	65.233	Ictidomys_tridecemlineatus
ENSORLG00000001434	ddx56	98	65.756	ENSJJAG00000014269	Ddx56	98	65.756	Jaculus_jaculus
ENSORLG00000001434	ddx56	99	83.929	ENSKMAG00000016611	ddx56	99	84.107	Kryptolebias_marmoratus
ENSORLG00000001434	ddx56	99	81.574	ENSLBEG00000026281	ddx56	100	81.753	Labrus_bergylta
ENSORLG00000001434	ddx56	99	71.609	ENSLACG00000015551	DDX56	97	72.022	Latimeria_chalumnae
ENSORLG00000001434	ddx56	100	76.418	ENSLOCG00000015185	ddx56	99	76.773	Lepisosteus_oculatus
ENSORLG00000001434	ddx56	98	66.426	ENSLAFG00000018206	DDX56	98	66.426	Loxodonta_africana
ENSORLG00000001434	ddx56	97	65.880	ENSMFAG00000041001	DDX56	97	65.880	Macaca_fascicularis
ENSORLG00000001434	ddx56	97	65.880	ENSMMUG00000002645	DDX56	97	65.880	Macaca_mulatta
ENSORLG00000001434	ddx56	97	65.880	ENSMNEG00000028492	DDX56	97	65.880	Macaca_nemestrina
ENSORLG00000001434	ddx56	97	66.055	ENSMLEG00000043591	DDX56	97	66.055	Mandrillus_leucophaeus
ENSORLG00000001434	ddx56	100	81.786	ENSMAMG00000007776	ddx56	100	82.500	Mastacembelus_armatus
ENSORLG00000001434	ddx56	100	80.357	ENSMZEG00005009813	ddx56	100	81.071	Maylandia_zebra
ENSORLG00000001434	ddx56	99	65.642	ENSMICG00000005550	DDX56	99	65.642	Microcebus_murinus
ENSORLG00000001434	ddx56	99	63.978	ENSMOCG00000016782	Ddx56	99	63.978	Microtus_ochrogaster
ENSORLG00000001434	ddx56	100	78.863	ENSMMOG00000009654	ddx56	100	79.574	Mola_mola
ENSORLG00000001434	ddx56	99	60.612	ENSMODG00000016137	DDX56	98	60.612	Monodelphis_domestica
ENSORLG00000001434	ddx56	67	77.632	ENSMALG00000016910	ddx56	99	77.632	Monopterus_albus
ENSORLG00000001434	ddx56	99	64.195	MGP_CAROLIEiJ_G0016069	Ddx56	98	66.532	Mus_caroli
ENSORLG00000001434	ddx56	99	64.337	ENSMUSG00000004393	Ddx56	98	66.935	Mus_musculus
ENSORLG00000001434	ddx56	99	64.337	MGP_PahariEiJ_G0016822	Ddx56	98	66.532	Mus_pahari
ENSORLG00000001434	ddx56	99	64.337	MGP_SPRETEiJ_G0016911	Ddx56	98	66.935	Mus_spretus
ENSORLG00000001434	ddx56	98	64.791	ENSMPUG00000018196	DDX56	86	64.791	Mustela_putorius_furo
ENSORLG00000001434	ddx56	91	67.913	ENSMLUG00000003509	DDX56	99	64.505	Myotis_lucifugus
ENSORLG00000001434	ddx56	99	66.126	ENSNGAG00000018785	Ddx56	99	66.126	Nannospalax_galili
ENSORLG00000001434	ddx56	95	76.836	ENSNBRG00000002656	ddx56	96	76.836	Neolamprologus_brichardi
ENSORLG00000001434	ddx56	97	66.545	ENSNLEG00000003816	DDX56	97	66.545	Nomascus_leucogenys
ENSORLG00000001434	ddx56	89	62.777	ENSMEUG00000006788	DDX56	99	62.777	Notamacropus_eugenii
ENSORLG00000001434	ddx56	98	63.686	ENSOPRG00000000292	-	97	63.686	Ochotona_princeps
ENSORLG00000001434	ddx56	67	68.617	ENSODEG00000014807	DDX56	99	68.617	Octodon_degus
ENSORLG00000001434	ddx56	100	78.674	ENSONIG00000011509	ddx56	99	78.674	Oreochromis_niloticus
ENSORLG00000001434	ddx56	72	57.248	ENSOANG00000015987	-	94	57.248	Ornithorhynchus_anatinus
ENSORLG00000001434	ddx56	96	57.353	ENSOANG00000006320	-	99	57.721	Ornithorhynchus_anatinus
ENSORLG00000001434	ddx56	99	64.928	ENSOCUG00000022918	DDX56	99	64.991	Oryctolagus_cuniculus
ENSORLG00000001434	ddx56	100	99.462	ENSORLG00020015718	ddx56	97	99.462	Oryzias_latipes_hni
ENSORLG00000001434	ddx56	99	100.000	ENSORLG00015003004	ddx56	96	100.000	Oryzias_latipes_hsok
ENSORLG00000001434	ddx56	100	96.953	ENSOMEG00000022072	ddx56	99	96.953	Oryzias_melastigma
ENSORLG00000001434	ddx56	97	64.717	ENSOGAG00000009981	DDX56	97	65.631	Otolemur_garnettii
ENSORLG00000001434	ddx56	99	65.771	ENSOARG00000015240	DDX56	99	65.771	Ovis_aries
ENSORLG00000001434	ddx56	97	63.423	ENSPPAG00000029147	DDX56	97	63.423	Pan_paniscus
ENSORLG00000001434	ddx56	99	54.189	ENSPPAG00000031263	-	99	54.189	Pan_paniscus
ENSORLG00000001434	ddx56	98	64.247	ENSPPRG00000014594	DDX56	98	64.247	Panthera_pardus
ENSORLG00000001434	ddx56	95	57.116	ENSPTIG00000019500	DDX56	98	57.491	Panthera_tigris_altaica
ENSORLG00000001434	ddx56	92	53.654	ENSPTRG00000052765	-	98	55.000	Pan_troglodytes
ENSORLG00000001434	ddx56	97	66.300	ENSPTRG00000019147	DDX56	97	66.300	Pan_troglodytes
ENSORLG00000001434	ddx56	97	65.505	ENSPANG00000002446	DDX56	97	65.505	Papio_anubis
ENSORLG00000001434	ddx56	100	75.986	ENSPKIG00000018998	ddx56	99	75.986	Paramormyrops_kingsleyae
ENSORLG00000001434	ddx56	95	82.143	ENSPMGG00000017421	ddx56	99	82.143	Periophthalmus_magnuspinnatus
ENSORLG00000001434	ddx56	99	67.027	ENSPCIG00000009336	DDX56	98	67.027	Phascolarctos_cinereus
ENSORLG00000001434	ddx56	100	86.047	ENSPFOG00000018658	ddx56	100	86.047	Poecilia_formosa
ENSORLG00000001434	ddx56	100	86.225	ENSPLAG00000019208	ddx56	100	86.225	Poecilia_latipinna
ENSORLG00000001434	ddx56	100	85.868	ENSPMEG00000001775	ddx56	100	85.868	Poecilia_mexicana
ENSORLG00000001434	ddx56	100	85.125	ENSPREG00000015142	ddx56	100	85.125	Poecilia_reticulata
ENSORLG00000001434	ddx56	97	66.117	ENSPPYG00000017591	DDX56	97	66.117	Pongo_abelii
ENSORLG00000001434	ddx56	97	65.809	ENSPCAG00000011499	DDX56	99	65.809	Procavia_capensis
ENSORLG00000001434	ddx56	97	66.422	ENSPCOG00000024864	DDX56	97	66.422	Propithecus_coquereli
ENSORLG00000001434	ddx56	87	69.668	ENSPVAG00000000791	DDX56	87	69.668	Pteropus_vampyrus
ENSORLG00000001434	ddx56	100	80.179	ENSPNYG00000019212	ddx56	100	80.893	Pundamilia_nyererei
ENSORLG00000001434	ddx56	98	76.951	ENSPNAG00000025446	ddx56	99	77.495	Pygocentrus_nattereri
ENSORLG00000001434	ddx56	99	64.516	ENSRNOG00000004670	Ddx56	99	64.516	Rattus_norvegicus
ENSORLG00000001434	ddx56	97	65.872	ENSRBIG00000030140	DDX56	97	65.872	Rhinopithecus_bieti
ENSORLG00000001434	ddx56	97	65.688	ENSRROG00000044428	DDX56	97	65.688	Rhinopithecus_roxellana
ENSORLG00000001434	ddx56	96	43.027	YLR276C	-	97	43.919	Saccharomyces_cerevisiae
ENSORLG00000001434	ddx56	97	65.751	ENSSBOG00000034339	DDX56	97	65.751	Saimiri_boliviensis_boliviensis
ENSORLG00000001434	ddx56	86	67.081	ENSSHAG00000016615	DDX56	99	67.081	Sarcophilus_harrisii
ENSORLG00000001434	ddx56	100	75.714	ENSSFOG00015012795	ddx56	100	75.714	Scleropages_formosus
ENSORLG00000001434	ddx56	100	81.528	ENSSMAG00000011280	ddx56	99	83.582	Scophthalmus_maximus
ENSORLG00000001434	ddx56	100	84.875	ENSSDUG00000023597	ddx56	100	85.053	Seriola_dumerili
ENSORLG00000001434	ddx56	100	84.520	ENSSLDG00000018369	ddx56	100	84.698	Seriola_lalandi_dorsalis
ENSORLG00000001434	ddx56	69	77.586	ENSSARG00000014363	DDX56	78	71.014	Sorex_araneus
ENSORLG00000001434	ddx56	100	69.982	ENSSPUG00000000784	DDX56	97	70.996	Sphenodon_punctatus
ENSORLG00000001434	ddx56	95	86.891	ENSSPAG00000009392	ddx56	99	87.079	Stegastes_partitus
ENSORLG00000001434	ddx56	99	64.260	ENSSSCG00000016745	DDX56	99	65.162	Sus_scrofa
ENSORLG00000001434	ddx56	100	81.028	ENSTRUG00000018623	ddx56	100	81.028	Takifugu_rubripes
ENSORLG00000001434	ddx56	99	80.177	ENSTNIG00000013593	ddx56	100	80.885	Tetraodon_nigroviridis
ENSORLG00000001434	ddx56	99	64.632	ENSTBEG00000007119	DDX56	99	64.632	Tupaia_belangeri
ENSORLG00000001434	ddx56	84	65.319	ENSTTRG00000010552	DDX56	96	65.745	Tursiops_truncatus
ENSORLG00000001434	ddx56	98	64.791	ENSUAMG00000014194	DDX56	98	65.336	Ursus_americanus
ENSORLG00000001434	ddx56	98	64.791	ENSUMAG00000009666	DDX56	98	65.336	Ursus_maritimus
ENSORLG00000001434	ddx56	98	63.702	ENSVVUG00000011905	DDX56	98	64.247	Vulpes_vulpes
ENSORLG00000001434	ddx56	98	70.856	ENSXETG00000019000	ddx56	99	70.856	Xenopus_tropicalis
ENSORLG00000001434	ddx56	100	80.466	ENSXCOG00000017413	ddx56	99	80.466	Xiphophorus_couchianus
ENSORLG00000001434	ddx56	100	85.663	ENSXMAG00000018749	ddx56	100	85.663	Xiphophorus_maculatus