EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000001449 (Gene tree)
Gene ID: 101166133
Gene Symbol: eif3d
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit D
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 16735 bases
Position: chr8:3035386-3052120
Accession: 101166133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000001794	eIF-3_zeta	PF05091.12	2.1e-214	1	1
ENSORLP00000001790	eIF-3_zeta	PF05091.12	2.2e-214	1	1
ENSORLP00000029820	eIF-3_zeta	PF05091.12	2.7e-214	1	1
ENSORLP00000036792	eIF-3_zeta	PF05091.12	2.7e-214	1	1
ENSORLP00000043163	eIF-3_zeta	PF05091.12	2.7e-214	1	1
ENSORLP00000033626	eIF-3_zeta	PF05091.12	4.2e-214	1	1
ENSORLP00000001787	eIF-3_zeta	PF05091.12	2.3e-142	1	2
ENSORLP00000001787	eIF-3_zeta	PF05091.12	2.3e-142	2	2
ENSORLP00000031073	eIF-3_zeta	PF05091.12	3.7e-64	1	1
ENSORLP00000032410	eIF-3_zeta	PF05091.12	3.7e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000033013	-	846	-	ENSORLP00000031073	280 (aa)	-	-
ENSORLT00000044093	-	846	-	ENSORLP00000032410	280 (aa)	-	-
ENSORLT00000001791	-	2434	-	ENSORLP00000001790	562 (aa)	-	H2L7H8
ENSORLT00000031361	-	3122	-	ENSORLP00000029820	550 (aa)	-	-
ENSORLT00000001795	-	2413	XM_011477778	ENSORLP00000001794	555 (aa)	XP_011476080	H2L7I2
ENSORLT00000039740	-	3122	-	ENSORLP00000036792	550 (aa)	-	-
ENSORLT00000001788	-	1338	-	ENSORLP00000001787	445 (aa)	-	H2L7H5
ENSORLT00000043020	-	3122	-	ENSORLP00000043163	550 (aa)	-	-
ENSORLT00000028150	-	3122	-	ENSORLP00000033626	550 (aa)	-	-

Gene Model

Click here to download ENSORLG00000001449's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001449	eif3d	96	90.943	ENSG00000100353	EIF3D	100	88.889	Homo_sapiens
ENSORLG00000001449	eif3d	96	95.660	ENSAPOG00000002054	eif3d	98	95.367	Acanthochromis_polyacanthus
ENSORLG00000001449	eif3d	96	91.509	ENSAMEG00000009639	EIF3D	97	91.509	Ailuropoda_melanoleuca
ENSORLG00000001449	eif3d	96	95.094	ENSACIG00000013847	eif3d	94	95.094	Amphilophus_citrinellus
ENSORLG00000001449	eif3d	85	92.917	ENSAOCG00000005916	-	97	92.905	Amphiprion_ocellaris
ENSORLG00000001449	eif3d	96	95.497	ENSAOCG00000022455	eif3d	97	95.506	Amphiprion_ocellaris
ENSORLG00000001449	eif3d	96	95.497	ENSAPEG00000020361	eif3d	97	95.506	Amphiprion_percula
ENSORLG00000001449	eif3d	96	95.685	ENSATEG00000020784	eif3d	97	95.693	Anabas_testudineus
ENSORLG00000001449	eif3d	97	84.934	ENSAPLG00000002632	EIF3D	100	84.644	Anas_platyrhynchos
ENSORLG00000001449	eif3d	96	91.887	ENSACAG00000016308	EIF3D	97	91.887	Anolis_carolinensis
ENSORLG00000001449	eif3d	96	90.943	ENSANAG00000026835	EIF3D	97	90.943	Aotus_nancymaae
ENSORLG00000001449	eif3d	77	94.824	ENSACLG00000021430	EIF3D	94	94.824	Astatotilapia_calliptera
ENSORLG00000001449	eif3d	77	94.824	ENSACLG00000021852	eif3d	85	94.824	Astatotilapia_calliptera
ENSORLG00000001449	eif3d	77	94.824	ENSACLG00000021712	eif3d	81	94.824	Astatotilapia_calliptera
ENSORLG00000001449	eif3d	96	94.717	ENSACLG00000021167	eif3d	97	94.717	Astatotilapia_calliptera
ENSORLG00000001449	eif3d	77	94.824	ENSACLG00000021768	EIF3D	85	94.824	Astatotilapia_calliptera
ENSORLG00000001449	eif3d	96	93.246	ENSAMXG00000017547	eif3d	97	93.258	Astyanax_mexicanus
ENSORLG00000001449	eif3d	96	91.321	ENSBTAG00000001988	EIF3D	97	91.321	Bos_taurus
ENSORLG00000001449	eif3d	90	54.450	WBGene00001227	eif-3.D	97	44.365	Caenorhabditis_elegans
ENSORLG00000001449	eif3d	96	90.943	ENSCJAG00000013831	EIF3D	97	90.943	Callithrix_jacchus
ENSORLG00000001449	eif3d	96	91.509	ENSCAFG00000001544	EIF3D	97	91.509	Canis_familiaris
ENSORLG00000001449	eif3d	96	91.509	ENSCAFG00020004483	EIF3D	97	91.509	Canis_lupus_dingo
ENSORLG00000001449	eif3d	96	91.321	ENSCHIG00000012106	EIF3D	97	91.321	Capra_hircus
ENSORLG00000001449	eif3d	96	90.943	ENSTSYG00000008540	EIF3D	97	90.943	Carlito_syrichta
ENSORLG00000001449	eif3d	96	89.642	ENSCAPG00000015164	EIF3D	95	89.159	Cavia_aperea
ENSORLG00000001449	eif3d	96	91.509	ENSCPOG00000002529	EIF3D	97	91.509	Cavia_porcellus
ENSORLG00000001449	eif3d	96	90.943	ENSCCAG00000027331	EIF3D	97	90.943	Cebus_capucinus
ENSORLG00000001449	eif3d	96	90.943	ENSCATG00000045003	EIF3D	97	90.943	Cercocebus_atys
ENSORLG00000001449	eif3d	96	91.509	ENSCLAG00000016545	EIF3D	97	91.509	Chinchilla_lanigera
ENSORLG00000001449	eif3d	96	90.943	ENSCSAG00000007898	EIF3D	97	90.943	Chlorocebus_sabaeus
ENSORLG00000001449	eif3d	96	88.679	ENSCHOG00000004811	EIF3D	97	88.679	Choloepus_hoffmanni
ENSORLG00000001449	eif3d	96	92.264	ENSCPBG00000016309	EIF3D	97	92.264	Chrysemys_picta_bellii
ENSORLG00000001449	eif3d	97	64.652	ENSCING00000003680	-	97	64.630	Ciona_intestinalis
ENSORLG00000001449	eif3d	97	63.556	ENSCSAVG00000001450	-	97	61.974	Ciona_savignyi
ENSORLG00000001449	eif3d	96	90.943	ENSCANG00000031179	EIF3D	97	90.943	Colobus_angolensis_palliatus
ENSORLG00000001449	eif3d	96	91.132	ENSCGRG00001016584	EIF3D	97	91.132	Cricetulus_griseus_chok1gshd
ENSORLG00000001449	eif3d	96	91.132	ENSCGRG00000000302	EIF3D	97	91.132	Cricetulus_griseus_crigri
ENSORLG00000001449	eif3d	96	93.962	ENSCSEG00000020548	eif3d	97	93.446	Cynoglossus_semilaevis
ENSORLG00000001449	eif3d	79	94.960	ENSCVAG00000001999	eif3d	85	95.238	Cyprinodon_variegatus
ENSORLG00000001449	eif3d	96	93.396	ENSDARG00000021257	eif3d	98	92.963	Danio_rerio
ENSORLG00000001449	eif3d	85	89.958	ENSDNOG00000018482	EIF3D	92	90.244	Dasypus_novemcinctus
ENSORLG00000001449	eif3d	96	90.943	ENSDORG00000010491	Eif3d	97	90.943	Dipodomys_ordii
ENSORLG00000001449	eif3d	90	64.948	FBgn0040227	eIF3d1	94	58.396	Drosophila_melanogaster
ENSORLG00000001449	eif3d	93	60.680	FBgn0037994	eIF3d2	96	53.803	Drosophila_melanogaster
ENSORLG00000001449	eif3d	88	78.947	ENSETEG00000016315	-	98	79.063	Echinops_telfairi
ENSORLG00000001449	eif3d	94	74.713	ENSETEG00000002070	-	99	74.713	Echinops_telfairi
ENSORLG00000001449	eif3d	71	71.429	ENSETEG00000020233	-	100	75.785	Echinops_telfairi
ENSORLG00000001449	eif3d	91	79.695	ENSETEG00000009404	-	96	78.976	Echinops_telfairi
ENSORLG00000001449	eif3d	82	82.323	ENSEBUG00000009405	eif3d	93	82.116	Eptatretus_burgeri
ENSORLG00000001449	eif3d	96	91.321	ENSEASG00005018906	EIF3D	97	91.321	Equus_asinus_asinus
ENSORLG00000001449	eif3d	96	90.755	ENSECAG00000022413	EIF3D	97	90.755	Equus_caballus
ENSORLG00000001449	eif3d	93	86.574	ENSEEUG00000015771	EIF3D	97	81.887	Erinaceus_europaeus
ENSORLG00000001449	eif3d	96	94.906	ENSELUG00000018698	eif3d	96	94.906	Esox_lucius
ENSORLG00000001449	eif3d	96	91.509	ENSFCAG00000001131	EIF3D	97	91.509	Felis_catus
ENSORLG00000001449	eif3d	96	92.264	ENSFALG00000013012	EIF3D	97	92.264	Ficedula_albicollis
ENSORLG00000001449	eif3d	96	91.321	ENSFDAG00000004352	EIF3D	97	91.321	Fukomys_damarensis
ENSORLG00000001449	eif3d	96	91.887	ENSGMOG00000013341	eif3d	97	91.887	Gadus_morhua
ENSORLG00000001449	eif3d	96	92.075	ENSGALG00000012529	EIF3D	97	92.075	Gallus_gallus
ENSORLG00000001449	eif3d	99	92.701	ENSGACG00000014538	eif3d	97	94.528	Gasterosteus_aculeatus
ENSORLG00000001449	eif3d	96	92.264	ENSGAGG00000009617	EIF3D	97	92.264	Gopherus_agassizii
ENSORLG00000001449	eif3d	96	90.943	ENSGGOG00000003428	EIF3D	97	90.943	Gorilla_gorilla
ENSORLG00000001449	eif3d	100	93.694	ENSHBUG00000017230	eif3d	100	93.694	Haplochromis_burtoni
ENSORLG00000001449	eif3d	96	91.509	ENSHGLG00000016422	-	97	91.509	Heterocephalus_glaber_female
ENSORLG00000001449	eif3d	96	76.792	ENSHGLG00000006449	-	98	76.792	Heterocephalus_glaber_female
ENSORLG00000001449	eif3d	96	72.642	ENSHGLG00000000135	-	96	72.642	Heterocephalus_glaber_female
ENSORLG00000001449	eif3d	96	76.604	ENSHGLG00100013710	-	98	76.604	Heterocephalus_glaber_male
ENSORLG00000001449	eif3d	96	91.509	ENSHGLG00100007477	-	97	91.509	Heterocephalus_glaber_male
ENSORLG00000001449	eif3d	99	76.059	ENSHGLG00100001321	-	96	76.604	Heterocephalus_glaber_male
ENSORLG00000001449	eif3d	96	94.906	ENSHCOG00000007799	eif3d	97	94.382	Hippocampus_comes
ENSORLG00000001449	eif3d	96	93.058	ENSIPUG00000017267	eif3d	98	92.778	Ictalurus_punctatus
ENSORLG00000001449	eif3d	96	91.321	ENSSTOG00000011335	EIF3D	97	91.321	Ictidomys_tridecemlineatus
ENSORLG00000001449	eif3d	96	91.132	ENSJJAG00000010854	Eif3d	97	91.132	Jaculus_jaculus
ENSORLG00000001449	eif3d	96	94.934	ENSKMAG00000007133	eif3d	97	94.944	Kryptolebias_marmoratus
ENSORLG00000001449	eif3d	96	94.906	ENSLBEG00000005296	eif3d	97	94.195	Labrus_bergylta
ENSORLG00000001449	eif3d	96	86.492	ENSLACG00000001606	EIF3D	95	86.492	Latimeria_chalumnae
ENSORLG00000001449	eif3d	99	89.706	ENSLAFG00000001714	EIF3D	97	91.321	Loxodonta_africana
ENSORLG00000001449	eif3d	96	90.943	ENSMFAG00000000481	EIF3D	97	90.943	Macaca_fascicularis
ENSORLG00000001449	eif3d	96	90.943	ENSMMUG00000012754	EIF3D	96	92.093	Macaca_mulatta
ENSORLG00000001449	eif3d	96	90.943	ENSMNEG00000012843	EIF3D	97	90.943	Macaca_nemestrina
ENSORLG00000001449	eif3d	96	90.943	ENSMLEG00000037251	EIF3D	97	90.943	Mandrillus_leucophaeus
ENSORLG00000001449	eif3d	98	94.746	ENSMAMG00000020219	eif3d	99	95.229	Mastacembelus_armatus
ENSORLG00000001449	eif3d	100	93.694	ENSMZEG00005023294	eif3d	100	93.694	Maylandia_zebra
ENSORLG00000001449	eif3d	98	88.511	ENSMZEG00005024006	eif3d	97	90.093	Maylandia_zebra
ENSORLG00000001449	eif3d	85	89.958	ENSMGAG00000012653	EIF3D	100	90.878	Meleagris_gallopavo
ENSORLG00000001449	eif3d	96	91.321	ENSMAUG00000013161	Eif3d	97	91.321	Mesocricetus_auratus
ENSORLG00000001449	eif3d	96	91.321	ENSMICG00000012161	EIF3D	97	91.321	Microcebus_murinus
ENSORLG00000001449	eif3d	96	91.132	ENSMOCG00000011605	Eif3d	97	91.132	Microtus_ochrogaster
ENSORLG00000001449	eif3d	96	95.283	ENSMMOG00000021496	eif3d	96	95.283	Mola_mola
ENSORLG00000001449	eif3d	96	91.887	ENSMODG00000000821	EIF3D	97	91.887	Monodelphis_domestica
ENSORLG00000001449	eif3d	96	95.497	ENSMALG00000019436	eif3d	97	95.506	Monopterus_albus
ENSORLG00000001449	eif3d	96	91.321	MGP_CAROLIEiJ_G0019973	Eif3d	97	91.321	Mus_caroli
ENSORLG00000001449	eif3d	96	91.321	ENSMUSG00000016554	Eif3d	100	88.757	Mus_musculus
ENSORLG00000001449	eif3d	96	91.321	MGP_PahariEiJ_G0019975	Eif3d	97	91.321	Mus_pahari
ENSORLG00000001449	eif3d	96	91.321	MGP_SPRETEiJ_G0020871	Eif3d	97	91.321	Mus_spretus
ENSORLG00000001449	eif3d	81	57.895	ENSMPUG00000012581	EIF3D	100	57.895	Mustela_putorius_furo
ENSORLG00000001449	eif3d	96	90.943	ENSMLUG00000015857	EIF3D	97	90.943	Myotis_lucifugus
ENSORLG00000001449	eif3d	96	91.509	ENSNGAG00000012038	Eif3d	97	91.509	Nannospalax_galili
ENSORLG00000001449	eif3d	96	90.943	ENSNLEG00000014560	EIF3D	97	90.943	Nomascus_leucogenys
ENSORLG00000001449	eif3d	96	91.887	ENSMEUG00000004561	EIF3D	97	91.887	Notamacropus_eugenii
ENSORLG00000001449	eif3d	86	86.047	ENSOPRG00000006924	EIF3D	96	86.047	Ochotona_princeps
ENSORLG00000001449	eif3d	96	91.509	ENSODEG00000011039	EIF3D	97	91.509	Octodon_degus
ENSORLG00000001449	eif3d	100	93.514	ENSONIG00000009713	eif3d	100	93.514	Oreochromis_niloticus
ENSORLG00000001449	eif3d	97	80.403	ENSOANG00000007483	EIF3D	100	79.964	Ornithorhynchus_anatinus
ENSORLG00000001449	eif3d	96	91.132	ENSOCUG00000006363	EIF3D	97	91.132	Oryctolagus_cuniculus
ENSORLG00000001449	eif3d	100	97.468	ENSORLG00020000383	eif3d	99	97.468	Oryzias_latipes_hni
ENSORLG00000001449	eif3d	85	99.582	ENSORLG00020013943	eif3d	99	97.959	Oryzias_latipes_hni
ENSORLG00000001449	eif3d	85	95.397	ENSORLG00015006930	eif3d	90	96.167	Oryzias_latipes_hsok
ENSORLG00000001449	eif3d	85	99.582	ENSORLG00015006954	eif3d	99	96.013	Oryzias_latipes_hsok
ENSORLG00000001449	eif3d	85	89.958	ENSOMEG00000017372	eif3d	95	91.289	Oryzias_melastigma
ENSORLG00000001449	eif3d	85	97.071	ENSOMEG00000017337	eif3d	95	97.213	Oryzias_melastigma
ENSORLG00000001449	eif3d	96	90.943	ENSOGAG00000002978	EIF3D	97	90.943	Otolemur_garnettii
ENSORLG00000001449	eif3d	96	91.321	ENSOARG00000018926	EIF3D	97	91.321	Ovis_aries
ENSORLG00000001449	eif3d	96	90.943	ENSPPAG00000031183	EIF3D	97	90.943	Pan_paniscus
ENSORLG00000001449	eif3d	96	91.509	ENSPPRG00000007244	EIF3D	97	91.509	Panthera_pardus
ENSORLG00000001449	eif3d	96	90.377	ENSPTIG00000012272	EIF3D	97	89.888	Panthera_tigris_altaica
ENSORLG00000001449	eif3d	96	90.943	ENSPTRG00000014313	EIF3D	97	90.943	Pan_troglodytes
ENSORLG00000001449	eif3d	96	90.943	ENSPANG00000023980	EIF3D	97	90.943	Papio_anubis
ENSORLG00000001449	eif3d	96	94.906	ENSPKIG00000013892	eif3d	97	94.195	Paramormyrops_kingsleyae
ENSORLG00000001449	eif3d	96	92.642	ENSPSIG00000010983	EIF3D	97	92.642	Pelodiscus_sinensis
ENSORLG00000001449	eif3d	94	90.097	ENSPMGG00000004524	eif3d	98	90.097	Periophthalmus_magnuspinnatus
ENSORLG00000001449	eif3d	96	91.321	ENSPEMG00000014069	Eif3d	97	91.321	Peromyscus_maniculatus_bairdii
ENSORLG00000001449	eif3d	85	76.955	ENSPMAG00000008165	eif3d	97	79.310	Petromyzon_marinus
ENSORLG00000001449	eif3d	96	91.887	ENSPCIG00000021563	EIF3D	97	91.887	Phascolarctos_cinereus
ENSORLG00000001449	eif3d	96	95.310	ENSPFOG00000007516	eif3d	97	95.318	Poecilia_formosa
ENSORLG00000001449	eif3d	96	95.310	ENSPLAG00000015253	eif3d	97	95.318	Poecilia_latipinna
ENSORLG00000001449	eif3d	96	95.122	ENSPMEG00000019987	eif3d	97	95.131	Poecilia_mexicana
ENSORLG00000001449	eif3d	96	83.019	ENSPPYG00000011774	EIF3D	97	83.208	Pongo_abelii
ENSORLG00000001449	eif3d	83	92.126	ENSPCAG00000007788	EIF3D	84	92.188	Procavia_capensis
ENSORLG00000001449	eif3d	96	86.981	ENSPCOG00000014552	EIF3D	97	86.517	Propithecus_coquereli
ENSORLG00000001449	eif3d	96	91.132	ENSPVAG00000002014	EIF3D	97	91.132	Pteropus_vampyrus
ENSORLG00000001449	eif3d	100	93.514	ENSPNYG00000011917	eif3d	100	93.514	Pundamilia_nyererei
ENSORLG00000001449	eif3d	96	93.433	ENSPNAG00000000176	eif3d	97	93.446	Pygocentrus_nattereri
ENSORLG00000001449	eif3d	96	91.321	ENSRNOG00000005804	Eif3d	97	91.321	Rattus_norvegicus
ENSORLG00000001449	eif3d	96	90.943	ENSRBIG00000041563	EIF3D	97	90.943	Rhinopithecus_bieti
ENSORLG00000001449	eif3d	96	90.943	ENSRROG00000039588	EIF3D	97	90.943	Rhinopithecus_roxellana
ENSORLG00000001449	eif3d	96	90.943	ENSSBOG00000032811	EIF3D	97	90.943	Saimiri_boliviensis_boliviensis
ENSORLG00000001449	eif3d	96	92.075	ENSSHAG00000011209	EIF3D	97	92.075	Sarcophilus_harrisii
ENSORLG00000001449	eif3d	96	94.371	ENSSFOG00015023800	eif3d	97	94.195	Scleropages_formosus
ENSORLG00000001449	eif3d	96	94.717	ENSSMAG00000013962	eif3d	95	95.794	Scophthalmus_maximus
ENSORLG00000001449	eif3d	96	95.122	ENSSDUG00000023224	eif3d	97	95.131	Seriola_dumerili
ENSORLG00000001449	eif3d	96	95.283	ENSSLDG00000006833	eif3d	97	95.131	Seriola_lalandi_dorsalis
ENSORLG00000001449	eif3d	81	86.574	ENSSARG00000012488	EIF3D	97	80.973	Sorex_araneus
ENSORLG00000001449	eif3d	96	91.698	ENSSPUG00000011683	EIF3D	97	91.698	Sphenodon_punctatus
ENSORLG00000001449	eif3d	96	95.122	ENSSPAG00000003591	eif3d	97	95.131	Stegastes_partitus
ENSORLG00000001449	eif3d	96	91.321	ENSSSCG00000000141	EIF3D	97	91.321	Sus_scrofa
ENSORLG00000001449	eif3d	96	92.075	ENSTGUG00000010728	EIF3D	97	92.075	Taeniopygia_guttata
ENSORLG00000001449	eif3d	96	93.996	ENSTRUG00000007886	eif3d	96	94.007	Takifugu_rubripes
ENSORLG00000001449	eif3d	99	92.572	ENSTNIG00000011263	eif3d	96	94.675	Tetraodon_nigroviridis
ENSORLG00000001449	eif3d	89	91.207	ENSTBEG00000006268	EIF3D	96	91.207	Tupaia_belangeri
ENSORLG00000001449	eif3d	96	90.566	ENSTTRG00000006637	EIF3D	97	90.566	Tursiops_truncatus
ENSORLG00000001449	eif3d	96	91.509	ENSUAMG00000017485	EIF3D	97	91.509	Ursus_americanus
ENSORLG00000001449	eif3d	96	91.509	ENSUMAG00000015827	EIF3D	97	91.509	Ursus_maritimus
ENSORLG00000001449	eif3d	65	89.560	ENSVPAG00000000359	-	100	85.121	Vicugna_pacos
ENSORLG00000001449	eif3d	96	91.509	ENSVVUG00000023578	EIF3D	97	91.509	Vulpes_vulpes
ENSORLG00000001449	eif3d	96	89.493	ENSXETG00000027259	eif3d	97	89.513	Xenopus_tropicalis
ENSORLG00000001449	eif3d	96	85.283	ENSXCOG00000011633	eif3d	97	85.283	Xiphophorus_couchianus
ENSORLG00000001449	eif3d	96	94.934	ENSXMAG00000000954	eif3d	97	94.944	Xiphophorus_maculatus