EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000001620 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 2951 bases
Position: chr1:4337380-4340330
Accession: 101175372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000002010	RRM_1	PF00076.22	4.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002011	-	1014	XM_004065546	ENSORLP00000002010	337 (aa)	XP_004065594	H2L841

Gene Model

Click here to download ENSORLG00000001620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000001620	-	58	47.642	ENSORLG00000012331	ALYREF	99	40.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001620	-	88	56.566	ENSAPOG00000000183	-	98	57.912	Acanthochromis_polyacanthus
ENSORLG00000001620	-	58	44.860	ENSACIG00000006351	alyref	97	39.937	Amphilophus_citrinellus
ENSORLG00000001620	-	88	52.229	ENSACIG00000020351	-	99	51.911	Amphilophus_citrinellus
ENSORLG00000001620	-	88	55.333	ENSAOCG00000019305	-	98	57.333	Amphiprion_ocellaris
ENSORLG00000001620	-	58	48.113	ENSAOCG00000014012	alyref	99	41.083	Amphiprion_ocellaris
ENSORLG00000001620	-	58	48.113	ENSAPEG00000014603	alyref	99	41.083	Amphiprion_percula
ENSORLG00000001620	-	88	55.000	ENSAPEG00000013527	-	98	57.000	Amphiprion_percula
ENSORLG00000001620	-	87	54.515	ENSATEG00000000382	-	97	54.667	Anabas_testudineus
ENSORLG00000001620	-	58	48.598	ENSATEG00000004307	alyref	99	41.325	Anabas_testudineus
ENSORLG00000001620	-	58	46.226	ENSACLG00000008432	alyref	99	41.346	Astatotilapia_calliptera
ENSORLG00000001620	-	88	54.934	ENSACLG00000010184	-	98	57.377	Astatotilapia_calliptera
ENSORLG00000001620	-	56	48.598	ENSAMXG00000007359	alyref	99	41.796	Astyanax_mexicanus
ENSORLG00000001620	-	51	43.407	ENSCING00000013568	-	70	45.055	Ciona_intestinalis
ENSORLG00000001620	-	51	46.629	ENSCSAVG00000003324	-	70	47.753	Ciona_savignyi
ENSORLG00000001620	-	58	47.619	ENSCSEG00000017800	alyref	99	40.645	Cynoglossus_semilaevis
ENSORLG00000001620	-	88	53.642	ENSCVAG00000007789	-	98	56.954	Cyprinodon_variegatus
ENSORLG00000001620	-	58	48.341	ENSCVAG00000014869	alyref	99	41.587	Cyprinodon_variegatus
ENSORLG00000001620	-	60	46.725	ENSDARG00000077732	alyref	99	42.378	Danio_rerio
ENSORLG00000001620	-	87	34.277	FBgn0010774	Ref1	98	32.595	Drosophila_melanogaster
ENSORLG00000001620	-	50	47.253	ENSEBUG00000008253	alyref	98	35.849	Eptatretus_burgeri
ENSORLG00000001620	-	52	43.243	ENSEBUG00000006305	alyref	77	47.027	Eptatretus_burgeri
ENSORLG00000001620	-	88	44.839	ENSELUG00000008849	-	99	46.823	Esox_lucius
ENSORLG00000001620	-	57	50.235	ENSELUG00000017178	alyref	99	42.453	Esox_lucius
ENSORLG00000001620	-	58	47.887	ENSFHEG00000019426	alyref	99	41.853	Fundulus_heteroclitus
ENSORLG00000001620	-	88	54.667	ENSFHEG00000004698	-	98	58.333	Fundulus_heteroclitus
ENSORLG00000001620	-	69	46.862	ENSGMOG00000013122	-	100	46.025	Gadus_morhua
ENSORLG00000001620	-	50	56.284	ENSGMOG00000009882	alyref	67	55.191	Gadus_morhua
ENSORLG00000001620	-	88	54.027	ENSGAFG00000007573	-	97	56.040	Gambusia_affinis
ENSORLG00000001620	-	60	46.460	ENSGAFG00000006014	alyref	99	39.557	Gambusia_affinis
ENSORLG00000001620	-	58	46.226	ENSHBUG00000020196	alyref	99	41.346	Haplochromis_burtoni
ENSORLG00000001620	-	88	55.049	ENSHBUG00000001454	-	98	56.169	Haplochromis_burtoni
ENSORLG00000001620	-	90	50.000	ENSHCOG00000012825	-	95	51.852	Hippocampus_comes
ENSORLG00000001620	-	60	47.534	ENSIPUG00000009469	alyref	99	40.923	Ictalurus_punctatus
ENSORLG00000001620	-	58	47.887	ENSKMAG00000008912	alyref	99	42.405	Kryptolebias_marmoratus
ENSORLG00000001620	-	88	54.667	ENSKMAG00000006462	-	98	57.000	Kryptolebias_marmoratus
ENSORLG00000001620	-	50	59.880	ENSLBEG00000023118	alyref	92	42.671	Labrus_bergylta
ENSORLG00000001620	-	88	54.808	ENSLBEG00000005387	-	99	54.487	Labrus_bergylta
ENSORLG00000001620	-	88	55.518	ENSLBEG00000012930	-	99	55.518	Labrus_bergylta
ENSORLG00000001620	-	59	47.489	ENSMAMG00000003034	alyref	99	41.534	Mastacembelus_armatus
ENSORLG00000001620	-	88	55.518	ENSMAMG00000005464	-	98	55.518	Mastacembelus_armatus
ENSORLG00000001620	-	88	54.934	ENSMZEG00005012096	-	98	56.721	Maylandia_zebra
ENSORLG00000001620	-	58	46.226	ENSMZEG00005008639	alyref	99	41.346	Maylandia_zebra
ENSORLG00000001620	-	51	58.192	ENSMMOG00000007032	-	98	46.732	Mola_mola
ENSORLG00000001620	-	58	46.698	ENSMMOG00000012458	alyref	96	41.195	Mola_mola
ENSORLG00000001620	-	88	56.954	ENSMALG00000006054	-	98	55.629	Monopterus_albus
ENSORLG00000001620	-	50	47.368	ENSMLUG00000022178	-	98	36.825	Myotis_lucifugus
ENSORLG00000001620	-	61	42.857	ENSMLUG00000014372	-	98	38.608	Myotis_lucifugus
ENSORLG00000001620	-	51	47.739	ENSMLUG00000022467	-	65	44.388	Myotis_lucifugus
ENSORLG00000001620	-	50	49.727	ENSMLUG00000004098	-	99	38.141	Myotis_lucifugus
ENSORLG00000001620	-	50	50.820	ENSMLUG00000009247	-	65	48.634	Myotis_lucifugus
ENSORLG00000001620	-	50	45.503	ENSMLUG00000006521	-	99	36.533	Myotis_lucifugus
ENSORLG00000001620	-	60	46.047	ENSNGAG00000022014	-	99	39.297	Nannospalax_galili
ENSORLG00000001620	-	88	40.694	ENSNBRG00000001747	alyref	99	42.633	Neolamprologus_brichardi
ENSORLG00000001620	-	88	55.116	ENSNBRG00000017460	-	99	57.895	Neolamprologus_brichardi
ENSORLG00000001620	-	58	46.262	ENSONIG00000019434	alyref	99	40.764	Oreochromis_niloticus
ENSORLG00000001620	-	88	55.298	ENSONIG00000003296	-	98	57.426	Oreochromis_niloticus
ENSORLG00000001620	-	100	97.923	ENSORLG00020015673	-	100	97.923	Oryzias_latipes_hni
ENSORLG00000001620	-	58	47.196	ENSORLG00020011942	alyref	99	40.063	Oryzias_latipes_hni
ENSORLG00000001620	-	58	47.642	ENSORLG00015022664	alyref	99	40.635	Oryzias_latipes_hsok
ENSORLG00000001620	-	88	78.114	ENSORLG00015015143	-	98	78.114	Oryzias_latipes_hsok
ENSORLG00000001620	-	60	47.085	ENSOMEG00000019176	alyref	99	41.587	Oryzias_melastigma
ENSORLG00000001620	-	88	71.717	ENSOMEG00000007158	-	99	70.000	Oryzias_melastigma
ENSORLG00000001620	-	60	51.887	ENSPKIG00000006233	-	90	44.248	Paramormyrops_kingsleyae
ENSORLG00000001620	-	60	48.198	ENSPKIG00000007070	alyref	99	42.038	Paramormyrops_kingsleyae
ENSORLG00000001620	-	58	49.289	ENSPMGG00000016600	alyref	95	39.169	Periophthalmus_magnuspinnatus
ENSORLG00000001620	-	51	58.757	ENSPMGG00000012994	-	96	53.297	Periophthalmus_magnuspinnatus
ENSORLG00000001620	-	60	47.783	ENSPEMG00000016628	-	99	39.535	Peromyscus_maniculatus_bairdii
ENSORLG00000001620	-	88	54.000	ENSPFOG00000017094	-	98	56.711	Poecilia_formosa
ENSORLG00000001620	-	60	46.256	ENSPFOG00000022825	alyref	98	41.066	Poecilia_formosa
ENSORLG00000001620	-	60	46.460	ENSPLAG00000006948	alyref	99	40.881	Poecilia_latipinna
ENSORLG00000001620	-	88	54.000	ENSPLAG00000014380	-	98	56.711	Poecilia_latipinna
ENSORLG00000001620	-	88	54.000	ENSPMEG00000023039	-	98	56.711	Poecilia_mexicana
ENSORLG00000001620	-	60	46.256	ENSPMEG00000003547	alyref	99	41.066	Poecilia_mexicana
ENSORLG00000001620	-	88	54.849	ENSPREG00000003649	-	99	57.525	Poecilia_reticulata
ENSORLG00000001620	-	60	46.460	ENSPREG00000015795	alyref	99	40.881	Poecilia_reticulata
ENSORLG00000001620	-	58	46.226	ENSPNYG00000017498	alyref	99	41.346	Pundamilia_nyererei
ENSORLG00000001620	-	89	52.769	ENSPNYG00000002879	-	99	55.340	Pundamilia_nyererei
ENSORLG00000001620	-	56	47.393	ENSPNAG00000002531	alyref	99	40.752	Pygocentrus_nattereri
ENSORLG00000001620	-	58	45.274	ENSSHAG00000000609	-	99	38.851	Sarcophilus_harrisii
ENSORLG00000001620	-	58	43.396	ENSSHAG00000012866	-	99	36.102	Sarcophilus_harrisii
ENSORLG00000001620	-	88	55.853	ENSSMAG00000011169	-	96	73.563	Scophthalmus_maximus
ENSORLG00000001620	-	58	46.977	ENSSMAG00000009283	alyref	99	40.952	Scophthalmus_maximus
ENSORLG00000001620	-	58	47.642	ENSSDUG00000016158	alyref	99	40.506	Seriola_dumerili
ENSORLG00000001620	-	58	47.642	ENSSLDG00000017803	alyref	99	39.873	Seriola_lalandi_dorsalis
ENSORLG00000001620	-	88	57.432	ENSSPAG00000017028	-	96	59.122	Stegastes_partitus
ENSORLG00000001620	-	88	49.838	ENSTRUG00000003051	-	99	47.619	Takifugu_rubripes
ENSORLG00000001620	-	88	49.667	ENSTNIG00000014136	-	99	45.608	Tetraodon_nigroviridis
ENSORLG00000001620	-	60	47.368	ENSTNIG00000011595	alyref	99	39.735	Tetraodon_nigroviridis
ENSORLG00000001620	-	60	46.460	ENSXCOG00000018047	alyref	100	39.752	Xiphophorus_couchianus
ENSORLG00000001620	-	88	54.817	ENSXMAG00000018086	-	99	56.478	Xiphophorus_maculatus
ENSORLG00000001620	-	60	46.460	ENSXMAG00000012218	alyref	100	39.752	Xiphophorus_maculatus