EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000001622 (Gene tree)
Gene ID: 101154887
Gene Symbol: larsb
Alias: -
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 20687 bases
Position: chr14:7273225-7293911
Accession: 101154887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000031889	tRNA-synt_1g	PF09334.11	2.6e-17	1	2
ENSORLP00000031889	tRNA-synt_1g	PF09334.11	2.6e-17	2	2
ENSORLP00000002016	tRNA-synt_1g	PF09334.11	2.4e-13	1	1
ENSORLP00000031889	Anticodon_1	PF08264.13	3.6e-14	1	1
ENSORLP00000002016	Anticodon_1	PF08264.13	7.3e-09	1	1
ENSORLP00000031889	tRNA-synt_1	PF00133.22	4.1e-38	1	2
ENSORLP00000031889	tRNA-synt_1	PF00133.22	4.1e-38	2	2
ENSORLP00000002016	tRNA-synt_1	PF00133.22	3.3e-32	1	1
ENSORLP00000002016	tRNA-synt_1e	PF01406.19	1e-06	1	1
ENSORLP00000031889	tRNA-synt_1e	PF01406.19	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002017	-	3270	-	ENSORLP00000002016	1089 (aa)	-	H2L846
ENSORLT00000032062	-	4513	XM_023962133	ENSORLP00000031889	1184 (aa)	XP_023817901	UPI000CE26B8D

Gene Model

Click here to download ENSORLG00000001622's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001622	larsb	100	77.365	ENSG00000133706	LARS	100	78.299	Homo_sapiens
ENSORLG00000001622	larsb	100	93.086	ENSAPOG00000010585	larsb	100	93.482	Acanthochromis_polyacanthus
ENSORLG00000001622	larsb	99	77.956	ENSAMEG00000017584	LARS	100	77.956	Ailuropoda_melanoleuca
ENSORLG00000001622	larsb	100	91.147	ENSACIG00000014026	larsb	100	91.147	Amphilophus_citrinellus
ENSORLG00000001622	larsb	100	93.834	ENSAOCG00000016931	larsb	100	93.834	Amphiprion_ocellaris
ENSORLG00000001622	larsb	100	93.919	ENSAPEG00000017720	larsb	100	93.919	Amphiprion_percula
ENSORLG00000001622	larsb	100	87.268	ENSATEG00000010441	larsb	99	87.015	Anabas_testudineus
ENSORLG00000001622	larsb	100	77.293	ENSAPLG00000008145	LARS	100	79.090	Anas_platyrhynchos
ENSORLG00000001622	larsb	100	77.196	ENSACAG00000013916	LARS	100	77.280	Anolis_carolinensis
ENSORLG00000001622	larsb	100	69.172	ENSANAG00000014375	LARS	100	69.172	Aotus_nancymaae
ENSORLG00000001622	larsb	100	92.483	ENSACLG00000010881	larsb	100	92.483	Astatotilapia_calliptera
ENSORLG00000001622	larsb	100	87.595	ENSAMXG00000019979	larsb	100	87.426	Astyanax_mexicanus
ENSORLG00000001622	larsb	100	77.365	ENSBTAG00000006765	LARS	100	77.365	Bos_taurus
ENSORLG00000001622	larsb	99	55.117	WBGene00003073	lars-1	99	55.117	Caenorhabditis_elegans
ENSORLG00000001622	larsb	100	77.534	ENSCJAG00000021314	LARS	100	78.388	Callithrix_jacchus
ENSORLG00000001622	larsb	100	78.209	ENSCAFG00000006431	LARS	100	78.209	Canis_familiaris
ENSORLG00000001622	larsb	100	79.174	ENSCAFG00020025009	LARS	99	78.257	Canis_lupus_dingo
ENSORLG00000001622	larsb	100	77.534	ENSCHIG00000014949	LARS	100	77.534	Capra_hircus
ENSORLG00000001622	larsb	100	77.196	ENSTSYG00000001253	LARS	100	77.196	Carlito_syrichta
ENSORLG00000001622	larsb	100	59.786	ENSCAPG00000015676	LARS	97	62.577	Cavia_aperea
ENSORLG00000001622	larsb	100	76.858	ENSCPOG00000012329	LARS	100	76.858	Cavia_porcellus
ENSORLG00000001622	larsb	100	77.703	ENSCCAG00000020789	LARS	100	77.703	Cebus_capucinus
ENSORLG00000001622	larsb	100	76.114	ENSCATG00000033463	LARS	100	78.122	Cercocebus_atys
ENSORLG00000001622	larsb	100	77.111	ENSCLAG00000011193	LARS	100	77.111	Chinchilla_lanigera
ENSORLG00000001622	larsb	99	77.370	ENSCSAG00000012280	LARS	97	77.370	Chlorocebus_sabaeus
ENSORLG00000001622	larsb	90	70.862	ENSCHOG00000009309	LARS	90	70.862	Choloepus_hoffmanni
ENSORLG00000001622	larsb	100	78.718	ENSCPBG00000008415	LARS	99	80.090	Chrysemys_picta_bellii
ENSORLG00000001622	larsb	98	64.555	ENSCING00000008535	-	98	63.870	Ciona_intestinalis
ENSORLG00000001622	larsb	100	62.179	ENSCSAVG00000009040	-	100	67.762	Ciona_savignyi
ENSORLG00000001622	larsb	100	77.365	ENSCANG00000031137	LARS	100	77.365	Colobus_angolensis_palliatus
ENSORLG00000001622	larsb	97	70.147	ENSCGRG00001004647	Lars	99	72.338	Cricetulus_griseus_chok1gshd
ENSORLG00000001622	larsb	100	73.924	ENSCGRG00000007284	Lars	100	73.924	Cricetulus_griseus_crigri
ENSORLG00000001622	larsb	100	92.074	ENSCSEG00000014984	larsb	100	91.821	Cynoglossus_semilaevis
ENSORLG00000001622	larsb	100	93.412	ENSCVAG00000014685	larsb	100	93.412	Cyprinodon_variegatus
ENSORLG00000001622	larsb	67	86.984	ENSDARG00000019280	larsb	100	86.984	Danio_rerio
ENSORLG00000001622	larsb	100	74.689	ENSDNOG00000017963	LARS	100	77.312	Dasypus_novemcinctus
ENSORLG00000001622	larsb	100	72.597	ENSDORG00000014913	Lars	100	72.597	Dipodomys_ordii
ENSORLG00000001622	larsb	99	58.221	FBgn0284253	LeuRS	99	58.725	Drosophila_melanogaster
ENSORLG00000001622	larsb	94	62.657	ENSETEG00000003145	LARS	100	62.657	Echinops_telfairi
ENSORLG00000001622	larsb	92	60.291	ENSEBUG00000014985	larsb	97	60.200	Eptatretus_burgeri
ENSORLG00000001622	larsb	100	78.125	ENSEASG00005020569	LARS	100	78.512	Equus_asinus_asinus
ENSORLG00000001622	larsb	100	78.041	ENSECAG00000008963	LARS	100	78.919	Equus_caballus
ENSORLG00000001622	larsb	82	82.979	ENSEEUG00000014854	LARS	76	82.979	Erinaceus_europaeus
ENSORLG00000001622	larsb	100	85.389	ENSELUG00000023311	larsb	100	85.389	Esox_lucius
ENSORLG00000001622	larsb	99	77.834	ENSFCAG00000008715	LARS	100	79.139	Felis_catus
ENSORLG00000001622	larsb	100	78.397	ENSFALG00000003209	LARS	93	78.228	Ficedula_albicollis
ENSORLG00000001622	larsb	100	76.858	ENSFDAG00000020764	LARS	100	76.858	Fukomys_damarensis
ENSORLG00000001622	larsb	93	93.731	ENSFHEG00000010437	larsb	100	93.141	Fundulus_heteroclitus
ENSORLG00000001622	larsb	99	85.883	ENSGMOG00000013645	larsb	99	85.799	Gadus_morhua
ENSORLG00000001622	larsb	100	79.258	ENSGALG00000007494	LARS	100	79.342	Gallus_gallus
ENSORLG00000001622	larsb	100	92.230	ENSGAFG00000005029	larsb	100	92.230	Gambusia_affinis
ENSORLG00000001622	larsb	99	89.425	ENSGACG00000020720	larsb	99	89.340	Gasterosteus_aculeatus
ENSORLG00000001622	larsb	100	77.916	ENSGAGG00000002353	LARS	99	78.529	Gopherus_agassizii
ENSORLG00000001622	larsb	100	77.280	ENSGGOG00000004103	LARS	100	77.280	Gorilla_gorilla
ENSORLG00000001622	larsb	99	90.747	ENSHBUG00000003051	larsb	100	93.103	Haplochromis_burtoni
ENSORLG00000001622	larsb	100	77.027	ENSHGLG00000006937	LARS	100	77.027	Heterocephalus_glaber_female
ENSORLG00000001622	larsb	100	77.027	ENSHGLG00100002801	LARS	100	77.027	Heterocephalus_glaber_male
ENSORLG00000001622	larsb	99	90.279	ENSHCOG00000003651	larsb	100	90.279	Hippocampus_comes
ENSORLG00000001622	larsb	99	85.304	ENSIPUG00000010756	lars	100	85.494	Ictalurus_punctatus
ENSORLG00000001622	larsb	100	77.787	ENSSTOG00000002356	LARS	100	77.787	Ictidomys_tridecemlineatus
ENSORLG00000001622	larsb	100	76.436	ENSJJAG00000015265	Lars	100	76.436	Jaculus_jaculus
ENSORLG00000001622	larsb	100	92.996	ENSKMAG00000009903	larsb	100	93.080	Kryptolebias_marmoratus
ENSORLG00000001622	larsb	100	91.814	ENSLBEG00000025237	larsb	100	91.814	Labrus_bergylta
ENSORLG00000001622	larsb	100	78.283	ENSLACG00000009321	LARS	100	78.620	Latimeria_chalumnae
ENSORLG00000001622	larsb	99	82.487	ENSLOCG00000010442	larsb	99	82.318	Lepisosteus_oculatus
ENSORLG00000001622	larsb	99	77.280	ENSLAFG00000000318	LARS	100	77.242	Loxodonta_africana
ENSORLG00000001622	larsb	100	77.365	ENSMFAG00000038685	LARS	100	77.365	Macaca_fascicularis
ENSORLG00000001622	larsb	100	77.365	ENSMMUG00000029787	LARS	100	77.365	Macaca_mulatta
ENSORLG00000001622	larsb	99	75.465	ENSMNEG00000044014	LARS	99	75.465	Macaca_nemestrina
ENSORLG00000001622	larsb	99	77.411	ENSMLEG00000037563	LARS	99	77.411	Mandrillus_leucophaeus
ENSORLG00000001622	larsb	100	93.159	ENSMAMG00000021385	larsb	100	93.159	Mastacembelus_armatus
ENSORLG00000001622	larsb	100	92.399	ENSMZEG00005002662	larsb	100	92.399	Maylandia_zebra
ENSORLG00000001622	larsb	100	78.362	ENSMGAG00000009388	LARS	100	80.315	Meleagris_gallopavo
ENSORLG00000001622	larsb	99	67.090	ENSMAUG00000003063	Lars	89	90.476	Mesocricetus_auratus
ENSORLG00000001622	larsb	100	77.872	ENSMICG00000035589	-	100	77.872	Microcebus_murinus
ENSORLG00000001622	larsb	100	64.443	ENSMICG00000035435	-	100	64.443	Microcebus_murinus
ENSORLG00000001622	larsb	100	76.118	ENSMOCG00000002092	Lars	100	76.118	Microtus_ochrogaster
ENSORLG00000001622	larsb	100	88.617	ENSMMOG00000013802	larsb	100	88.364	Mola_mola
ENSORLG00000001622	larsb	99	72.382	ENSMODG00000010231	LARS	99	72.382	Monodelphis_domestica
ENSORLG00000001622	larsb	99	89.571	ENSMALG00000018444	larsb	99	89.571	Monopterus_albus
ENSORLG00000001622	larsb	100	76.371	MGP_CAROLIEiJ_G0022225	Lars	100	76.371	Mus_caroli
ENSORLG00000001622	larsb	100	76.034	ENSMUSG00000024493	Lars	100	76.034	Mus_musculus
ENSORLG00000001622	larsb	100	76.034	MGP_PahariEiJ_G0018958	Lars	100	76.034	Mus_pahari
ENSORLG00000001622	larsb	100	76.371	MGP_SPRETEiJ_G0023135	Lars	100	76.371	Mus_spretus
ENSORLG00000001622	larsb	100	77.956	ENSMPUG00000007844	LARS	100	77.956	Mustela_putorius_furo
ENSORLG00000001622	larsb	99	77.261	ENSMLUG00000001125	LARS	100	77.261	Myotis_lucifugus
ENSORLG00000001622	larsb	100	76.098	ENSNGAG00000011596	Lars	100	76.098	Nannospalax_galili
ENSORLG00000001622	larsb	100	92.736	ENSNBRG00000005764	larsb	100	92.736	Neolamprologus_brichardi
ENSORLG00000001622	larsb	99	76.988	ENSNLEG00000009816	LARS	99	76.988	Nomascus_leucogenys
ENSORLG00000001622	larsb	53	80.180	ENSMEUG00000002332	-	55	74.074	Notamacropus_eugenii
ENSORLG00000001622	larsb	82	81.720	ENSOPRG00000003076	LARS	83	81.720	Ochotona_princeps
ENSORLG00000001622	larsb	99	75.296	ENSODEG00000004882	LARS	100	75.296	Octodon_degus
ENSORLG00000001622	larsb	100	93.159	ENSONIG00000008493	larsb	100	93.159	Oreochromis_niloticus
ENSORLG00000001622	larsb	100	75.798	ENSOANG00000005755	LARS	100	75.798	Ornithorhynchus_anatinus
ENSORLG00000001622	larsb	100	78.294	ENSOCUG00000015684	LARS	100	78.294	Oryctolagus_cuniculus
ENSORLG00000001622	larsb	100	99.662	ENSORLG00020019950	larsb	100	99.662	Oryzias_latipes_hni
ENSORLG00000001622	larsb	100	99.747	ENSORLG00015003895	larsb	100	99.747	Oryzias_latipes_hsok
ENSORLG00000001622	larsb	100	97.382	ENSOMEG00000005677	larsb	100	97.382	Oryzias_melastigma
ENSORLG00000001622	larsb	100	73.540	ENSOGAG00000008750	LARS	100	75.739	Otolemur_garnettii
ENSORLG00000001622	larsb	100	77.280	ENSOARG00000015911	-	99	77.280	Ovis_aries
ENSORLG00000001622	larsb	99	77.346	ENSOARG00000002454	-	100	77.346	Ovis_aries
ENSORLG00000001622	larsb	99	77.327	ENSPPAG00000027964	LARS	99	77.327	Pan_paniscus
ENSORLG00000001622	larsb	100	77.956	ENSPPRG00000023492	LARS	100	77.956	Panthera_pardus
ENSORLG00000001622	larsb	100	77.787	ENSPTIG00000013110	LARS	100	77.787	Panthera_tigris_altaica
ENSORLG00000001622	larsb	100	77.196	ENSPTRG00000017372	LARS	100	77.196	Pan_troglodytes
ENSORLG00000001622	larsb	100	77.196	ENSPANG00000002663	LARS	100	77.196	Papio_anubis
ENSORLG00000001622	larsb	98	83.607	ENSPKIG00000006650	larsb	99	80.892	Paramormyrops_kingsleyae
ENSORLG00000001622	larsb	99	79.121	ENSPSIG00000015641	LARS	100	78.867	Pelodiscus_sinensis
ENSORLG00000001622	larsb	68	92.125	ENSPMGG00000019556	LARS	100	92.125	Periophthalmus_magnuspinnatus
ENSORLG00000001622	larsb	100	73.486	ENSPEMG00000010933	Lars	100	72.574	Peromyscus_maniculatus_bairdii
ENSORLG00000001622	larsb	50	60.791	ENSPMAG00000005301	larsb	99	60.791	Petromyzon_marinus
ENSORLG00000001622	larsb	100	76.267	ENSPCIG00000030572	LARS	100	76.267	Phascolarctos_cinereus
ENSORLG00000001622	larsb	100	92.990	ENSPFOG00000002361	larsb	100	92.990	Poecilia_formosa
ENSORLG00000001622	larsb	100	92.905	ENSPLAG00000016550	larsb	100	92.905	Poecilia_latipinna
ENSORLG00000001622	larsb	100	92.821	ENSPMEG00000018422	larsb	100	92.821	Poecilia_mexicana
ENSORLG00000001622	larsb	100	92.145	ENSPREG00000005668	larsb	100	92.145	Poecilia_reticulata
ENSORLG00000001622	larsb	99	75.635	ENSPPYG00000015908	LARS	97	75.635	Pongo_abelii
ENSORLG00000001622	larsb	94	61.670	ENSPCAG00000005621	LARS	100	60.592	Procavia_capensis
ENSORLG00000001622	larsb	100	76.689	ENSPCOG00000019325	LARS	100	76.689	Propithecus_coquereli
ENSORLG00000001622	larsb	100	66.165	ENSPVAG00000011237	LARS	100	70.079	Pteropus_vampyrus
ENSORLG00000001622	larsb	100	92.399	ENSPNYG00000015254	larsb	100	92.399	Pundamilia_nyererei
ENSORLG00000001622	larsb	100	85.726	ENSPNAG00000027191	larsb	100	85.726	Pygocentrus_nattereri
ENSORLG00000001622	larsb	100	76.034	ENSRNOG00000018304	Lars	100	76.034	Rattus_norvegicus
ENSORLG00000001622	larsb	94	76.122	ENSRBIG00000043198	LARS	99	76.122	Rhinopithecus_bieti
ENSORLG00000001622	larsb	90	45.826	YPL160W	CDC60	99	45.389	Saccharomyces_cerevisiae
ENSORLG00000001622	larsb	99	75.127	ENSSBOG00000026661	LARS	100	78.147	Saimiri_boliviensis_boliviensis
ENSORLG00000001622	larsb	100	77.637	ENSSHAG00000006084	LARS	100	77.637	Sarcophilus_harrisii
ENSORLG00000001622	larsb	97	84.703	ENSSFOG00015018117	larsb	90	84.703	Scleropages_formosus
ENSORLG00000001622	larsb	88	93.001	ENSSMAG00000004078	larsb	97	92.905	Scophthalmus_maximus
ENSORLG00000001622	larsb	100	93.750	ENSSDUG00000021142	larsb	100	93.750	Seriola_dumerili
ENSORLG00000001622	larsb	100	93.919	ENSSLDG00000007054	larsb	100	93.919	Seriola_lalandi_dorsalis
ENSORLG00000001622	larsb	84	77.011	ENSSARG00000013481	LARS	78	90.476	Sorex_araneus
ENSORLG00000001622	larsb	100	78.752	ENSSPUG00000013805	LARS	100	78.499	Sphenodon_punctatus
ENSORLG00000001622	larsb	100	94.510	ENSSPAG00000012124	larsb	100	94.510	Stegastes_partitus
ENSORLG00000001622	larsb	100	77.798	ENSSSCG00000014411	LARS	100	74.493	Sus_scrofa
ENSORLG00000001622	larsb	100	77.560	ENSTGUG00000000092	-	99	78.360	Taeniopygia_guttata
ENSORLG00000001622	larsb	100	89.105	ENSTRUG00000005358	larsb	100	89.105	Takifugu_rubripes
ENSORLG00000001622	larsb	99	85.618	ENSTNIG00000018214	larsb	100	85.534	Tetraodon_nigroviridis
ENSORLG00000001622	larsb	91	75.099	ENSTBEG00000003757	LARS	94	75.099	Tupaia_belangeri
ENSORLG00000001622	larsb	100	72.906	ENSTTRG00000016712	LARS	96	75.197	Tursiops_truncatus
ENSORLG00000001622	larsb	94	78.763	ENSUAMG00000019907	LARS	99	78.763	Ursus_americanus
ENSORLG00000001622	larsb	100	77.872	ENSUMAG00000010585	LARS	100	77.872	Ursus_maritimus
ENSORLG00000001622	larsb	92	77.349	ENSVPAG00000000557	LARS	92	77.349	Vicugna_pacos
ENSORLG00000001622	larsb	100	78.209	ENSVVUG00000021124	LARS	100	78.209	Vulpes_vulpes
ENSORLG00000001622	larsb	99	80.169	ENSXETG00000002320	lars	99	80.000	Xenopus_tropicalis
ENSORLG00000001622	larsb	100	92.230	ENSXMAG00000001454	larsb	100	92.230	Xiphophorus_maculatus