EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000001714 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7013 bases
Position: chr9:5319511-5326523
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000002129	zf-CCHC	PF00098.23	1.1e-08	1	1
ENSORLP00000043756	zf-CCHC	PF00098.23	2.1e-05	1	1
ENSORLP00000043756	PAP_assoc	PF03828.19	4.9e-10	1	1
ENSORLP00000002129	PAP_assoc	PF03828.19	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002130	-	1995	-	ENSORLP00000002129	664 (aa)	-	H2L8F7
ENSORLT00000037624	-	921	-	ENSORLP00000043756	306 (aa)	-	-

Gene Model

Click here to download ENSORLG00000001714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000001714	-	96	43.429	ENSORLG00000013135	-	59	50.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001714	-	94	49.563	ENSG00000083223	TUT7	95	44.103	Homo_sapiens
ENSORLG00000001714	-	99	64.698	ENSAPOG00000012979	TUT7	95	64.979	Acanthochromis_polyacanthus
ENSORLG00000001714	-	97	44.987	ENSAMEG00000004148	TUT7	64	47.442	Ailuropoda_melanoleuca
ENSORLG00000001714	-	79	71.756	ENSAOCG00000004223	-	76	72.449	Amphiprion_ocellaris
ENSORLG00000001714	-	97	58.642	ENSAPEG00000014922	-	92	58.523	Amphiprion_percula
ENSORLG00000001714	-	95	51.402	ENSAPLG00000015510	TUT7	58	51.402	Anas_platyrhynchos
ENSORLG00000001714	-	78	45.893	ENSACAG00000000279	TUT7	88	46.316	Anolis_carolinensis
ENSORLG00000001714	-	94	49.708	ENSANAG00000025848	TUT7	95	44.216	Aotus_nancymaae
ENSORLG00000001714	-	99	62.861	ENSACLG00000018198	TUT7	95	63.223	Astatotilapia_calliptera
ENSORLG00000001714	-	99	45.652	ENSBTAG00000001737	TUT7	58	51.852	Bos_taurus
ENSORLG00000001714	-	94	49.708	ENSCJAG00000001845	TUT7	95	44.216	Callithrix_jacchus
ENSORLG00000001714	-	97	44.730	ENSCAFG00000001331	TUT7	64	47.261	Canis_familiaris
ENSORLG00000001714	-	97	49.855	ENSCAFG00020023620	TUT7	95	44.909	Canis_lupus_dingo
ENSORLG00000001714	-	99	44.697	ENSCHIG00000017690	TUT7	59	51.577	Capra_hircus
ENSORLG00000001714	-	99	49.438	ENSTSYG00000008907	TUT7	100	44.670	Carlito_syrichta
ENSORLG00000001714	-	97	43.959	ENSCPOG00000002500	TUT7	61	48.299	Cavia_porcellus
ENSORLG00000001714	-	94	49.854	ENSCATG00000032888	TUT7	95	44.359	Cercocebus_atys
ENSORLG00000001714	-	97	43.188	ENSCLAG00000007535	TUT7	65	47.512	Chinchilla_lanigera
ENSORLG00000001714	-	94	44.882	ENSCSAG00000007408	TUT7	64	47.105	Chlorocebus_sabaeus
ENSORLG00000001714	-	58	54.588	ENSCHOG00000011129	TUT7	52	52.993	Choloepus_hoffmanni
ENSORLG00000001714	-	97	45.244	ENSCPBG00000005272	TUT7	55	52.830	Chrysemys_picta_bellii
ENSORLG00000001714	-	94	49.854	ENSCANG00000035790	TUT7	95	44.359	Colobus_angolensis_palliatus
ENSORLG00000001714	-	97	44.730	ENSCGRG00001020605	-	65	47.031	Cricetulus_griseus_chok1gshd
ENSORLG00000001714	-	97	44.588	ENSCGRG00000016585	-	58	50.929	Cricetulus_griseus_crigri
ENSORLG00000001714	-	99	59.358	ENSCSEG00000007068	TUT7	97	59.078	Cynoglossus_semilaevis
ENSORLG00000001714	-	97	59.456	ENSCVAG00000012526	-	98	60.172	Cyprinodon_variegatus
ENSORLG00000001714	-	85	45.596	ENSDARG00000074645	CABZ01032476.1	78	46.907	Danio_rerio
ENSORLG00000001714	-	100	43.553	ENSDNOG00000010663	TUT7	76	43.501	Dasypus_novemcinctus
ENSORLG00000001714	-	94	50.000	ENSDORG00000009046	-	90	50.141	Dipodomys_ordii
ENSORLG00000001714	-	99	44.192	ENSEASG00005020165	TUT7	56	47.962	Equus_asinus_asinus
ENSORLG00000001714	-	99	44.192	ENSECAG00000014831	TUT7	57	47.962	Equus_caballus
ENSORLG00000001714	-	98	49.626	ENSELUG00000013049	-	67	80.899	Esox_lucius
ENSORLG00000001714	-	97	49.858	ENSFCAG00000003491	TUT7	95	44.987	Felis_catus
ENSORLG00000001714	-	97	46.272	ENSFALG00000003541	TUT7	73	52.799	Ficedula_albicollis
ENSORLG00000001714	-	99	43.478	ENSFDAG00000002315	TUT7	58	49.909	Fukomys_damarensis
ENSORLG00000001714	-	97	60.508	ENSFHEG00000004770	-	97	60.508	Fundulus_heteroclitus
ENSORLG00000001714	-	74	62.709	ENSGMOG00000001464	-	88	61.967	Gadus_morhua
ENSORLG00000001714	-	97	45.385	ENSGALG00000012607	ZCCHC6	57	55.227	Gallus_gallus
ENSORLG00000001714	-	82	64.803	ENSGAFG00000017141	-	84	65.132	Gambusia_affinis
ENSORLG00000001714	-	90	62.667	ENSGAFG00000017138	-	95	62.667	Gambusia_affinis
ENSORLG00000001714	-	87	63.722	ENSGACG00000004735	TUT7	94	63.880	Gasterosteus_aculeatus
ENSORLG00000001714	-	97	44.845	ENSGAGG00000013087	TUT7	56	52.158	Gopherus_agassizii
ENSORLG00000001714	-	94	49.854	ENSGGOG00000007523	ZCCHC6	95	44.359	Gorilla_gorilla
ENSORLG00000001714	-	97	58.567	ENSHBUG00000011514	-	96	58.112	Haplochromis_burtoni
ENSORLG00000001714	-	97	43.702	ENSHGLG00000018427	TUT7	66	46.299	Heterocephalus_glaber_female
ENSORLG00000001714	-	97	43.702	ENSHGLG00100004701	TUT7	66	46.299	Heterocephalus_glaber_male
ENSORLG00000001714	-	96	62.733	ENSHCOG00000006100	-	93	62.733	Hippocampus_comes
ENSORLG00000001714	-	97	43.959	ENSSTOG00000000586	TUT7	64	47.115	Ictidomys_tridecemlineatus
ENSORLG00000001714	-	97	48.034	ENSJJAG00000000106	-	91	48.034	Jaculus_jaculus
ENSORLG00000001714	-	98	61.337	ENSKMAG00000005782	-	94	61.337	Kryptolebias_marmoratus
ENSORLG00000001714	-	79	67.139	ENSLBEG00000015545	-	78	68.085	Labrus_bergylta
ENSORLG00000001714	-	97	47.396	ENSLACG00000001637	TUT7	63	49.106	Latimeria_chalumnae
ENSORLG00000001714	-	89	54.167	ENSLOCG00000002472	TUT7	67	54.167	Lepisosteus_oculatus
ENSORLG00000001714	-	97	39.589	ENSLAFG00000007884	TUT7	64	49.146	Loxodonta_africana
ENSORLG00000001714	-	94	49.708	ENSMFAG00000000971	TUT7	95	44.216	Macaca_fascicularis
ENSORLG00000001714	-	94	49.854	ENSMMUG00000003401	TUT7	95	44.359	Macaca_mulatta
ENSORLG00000001714	-	94	49.854	ENSMNEG00000031427	TUT7	95	44.359	Macaca_nemestrina
ENSORLG00000001714	-	94	49.854	ENSMLEG00000027049	TUT7	95	44.359	Mandrillus_leucophaeus
ENSORLG00000001714	-	98	61.823	ENSMAMG00000011815	TUT7	99	61.823	Mastacembelus_armatus
ENSORLG00000001714	-	99	62.861	ENSMZEG00005012809	TUT7	95	63.223	Maylandia_zebra
ENSORLG00000001714	-	98	34.739	ENSMGAG00000006542	TUT7	61	45.387	Meleagris_gallopavo
ENSORLG00000001714	-	97	44.473	ENSMAUG00000006963	-	64	46.501	Mesocricetus_auratus
ENSORLG00000001714	-	95	49.565	ENSMICG00000016944	TUT7	95	49.565	Microcebus_murinus
ENSORLG00000001714	-	97	50.142	ENSMOCG00000007812	-	89	50.142	Microtus_ochrogaster
ENSORLG00000001714	-	99	44.304	ENSMODG00000003542	TUT7	66	46.293	Monodelphis_domestica
ENSORLG00000001714	-	98	63.665	ENSMALG00000000634	TUT7	95	62.926	Monopterus_albus
ENSORLG00000001714	-	97	44.473	MGP_CAROLIEiJ_G0018612	-	62	48.089	Mus_caroli
ENSORLG00000001714	-	97	44.359	ENSMUSG00000035248	Tut7	65	46.719	Mus_musculus
ENSORLG00000001714	-	97	44.670	MGP_PahariEiJ_G0019676	-	65	48.265	Mus_pahari
ENSORLG00000001714	-	97	44.615	MGP_SPRETEiJ_G0019491	-	65	46.719	Mus_spretus
ENSORLG00000001714	-	99	44.192	ENSMPUG00000002191	TUT7	55	47.287	Mustela_putorius_furo
ENSORLG00000001714	-	97	44.730	ENSMLUG00000001298	TUT7	66	46.096	Myotis_lucifugus
ENSORLG00000001714	-	97	49.288	ENSNGAG00000022758	-	90	49.288	Nannospalax_galili
ENSORLG00000001714	-	99	63.534	ENSNBRG00000021961	TUT7	96	63.904	Neolamprologus_brichardi
ENSORLG00000001714	-	99	47.812	ENSNLEG00000005138	TUT7	95	43.959	Nomascus_leucogenys
ENSORLG00000001714	-	97	48.011	ENSODEG00000006904	-	89	48.718	Octodon_degus
ENSORLG00000001714	-	91	63.934	ENSONIG00000017001	TUT7	85	69.429	Oreochromis_niloticus
ENSORLG00000001714	-	97	44.103	ENSOCUG00000010949	TUT7	61	46.605	Oryctolagus_cuniculus
ENSORLG00000001714	-	100	89.610	ENSORLG00020007882	-	99	89.610	Oryzias_latipes_hni
ENSORLG00000001714	-	100	92.922	ENSORLG00015017233	-	100	92.922	Oryzias_latipes_hsok
ENSORLG00000001714	-	99	72.810	ENSOMEG00000015528	-	93	69.859	Oryzias_melastigma
ENSORLG00000001714	-	97	43.702	ENSOGAG00000015630	TUT7	64	47.335	Otolemur_garnettii
ENSORLG00000001714	-	99	44.697	ENSOARG00000008732	TUT7	56	51.301	Ovis_aries
ENSORLG00000001714	-	94	49.854	ENSPPAG00000038548	TUT7	95	44.359	Pan_paniscus
ENSORLG00000001714	-	97	49.573	ENSPPRG00000011084	TUT7	95	44.730	Panthera_pardus
ENSORLG00000001714	-	97	49.573	ENSPTIG00000007881	TUT7	95	44.730	Panthera_tigris_altaica
ENSORLG00000001714	-	94	49.854	ENSPTRG00000021076	TUT7	95	44.359	Pan_troglodytes
ENSORLG00000001714	-	94	49.854	ENSPANG00000024890	TUT7	95	44.359	Papio_anubis
ENSORLG00000001714	-	97	50.975	ENSPKIG00000022326	TUT7	67	54.484	Paramormyrops_kingsleyae
ENSORLG00000001714	-	97	44.304	ENSPSIG00000003600	TUT7	62	47.626	Pelodiscus_sinensis
ENSORLG00000001714	-	97	61.442	ENSPMGG00000012649	-	89	61.442	Periophthalmus_magnuspinnatus
ENSORLG00000001714	-	97	44.987	ENSPEMG00000014030	-	64	48.089	Peromyscus_maniculatus_bairdii
ENSORLG00000001714	-	99	45.526	ENSPCIG00000018302	TUT7	64	47.930	Phascolarctos_cinereus
ENSORLG00000001714	-	92	62.857	ENSPFOG00000011606	-	91	63.158	Poecilia_formosa
ENSORLG00000001714	-	100	62.465	ENSPLAG00000006121	TUT7	98	62.577	Poecilia_latipinna
ENSORLG00000001714	-	99	62.577	ENSPMEG00000015937	-	98	62.577	Poecilia_mexicana
ENSORLG00000001714	-	99	57.730	ENSPREG00000009118	TUT7	95	58.440	Poecilia_reticulata
ENSORLG00000001714	-	97	43.846	ENSPPYG00000019340	TUT7	64	47.343	Pongo_abelii
ENSORLG00000001714	-	99	49.020	ENSPCOG00000023407	TUT7	100	44.051	Propithecus_coquereli
ENSORLG00000001714	-	99	62.448	ENSPNYG00000004149	TUT7	95	62.810	Pundamilia_nyererei
ENSORLG00000001714	-	97	44.703	ENSRNOG00000016629	Tut7	64	47.840	Rattus_norvegicus
ENSORLG00000001714	-	94	49.854	ENSRBIG00000016827	TUT7	95	44.359	Rhinopithecus_bieti
ENSORLG00000001714	-	94	49.854	ENSRROG00000034432	TUT7	95	44.359	Rhinopithecus_roxellana
ENSORLG00000001714	-	99	44.332	ENSSHAG00000008290	TUT7	64	47.295	Sarcophilus_harrisii
ENSORLG00000001714	-	97	49.725	ENSSFOG00015009813	zcchc6	85	44.975	Scleropages_formosus
ENSORLG00000001714	-	96	64.724	ENSSMAG00000010045	-	92	64.724	Scophthalmus_maximus
ENSORLG00000001714	-	98	65.749	ENSSDUG00000012876	TUT7	98	63.750	Seriola_dumerili
ENSORLG00000001714	-	98	65.749	ENSSLDG00000019107	-	87	65.749	Seriola_lalandi_dorsalis
ENSORLG00000001714	-	71	48.375	ENSSARG00000009763	TUT7	61	48.664	Sorex_araneus
ENSORLG00000001714	-	98	44.898	ENSSPUG00000004029	TUT7	57	51.789	Sphenodon_punctatus
ENSORLG00000001714	-	97	62.654	ENSSPAG00000018387	-	97	61.972	Stegastes_partitus
ENSORLG00000001714	-	97	44.845	ENSSSCG00000010952	TUT7	68	47.745	Sus_scrofa
ENSORLG00000001714	-	98	45.362	ENSTGUG00000000624	TUT7	61	52.462	Taeniopygia_guttata
ENSORLG00000001714	-	97	63.272	ENSTRUG00000023807	-	87	63.272	Takifugu_rubripes
ENSORLG00000001714	-	91	58.015	ENSTNIG00000015951	TUT7	94	58.015	Tetraodon_nigroviridis
ENSORLG00000001714	-	97	43.478	ENSTBEG00000010446	TUT7	66	46.202	Tupaia_belangeri
ENSORLG00000001714	-	97	49.573	ENSUAMG00000027094	-	91	51.838	Ursus_americanus
ENSORLG00000001714	-	96	44.560	ENSUMAG00000004929	TUT7	64	47.724	Ursus_maritimus
ENSORLG00000001714	-	88	43.478	ENSVPAG00000001946	TUT7	64	44.462	Vicugna_pacos
ENSORLG00000001714	-	99	44.192	ENSVVUG00000022427	TUT7	65	47.492	Vulpes_vulpes
ENSORLG00000001714	-	99	50.081	ENSXETG00000017552	tut7	63	50.160	Xenopus_tropicalis
ENSORLG00000001714	-	100	62.483	ENSXCOG00000009445	-	82	62.622	Xiphophorus_couchianus
ENSORLG00000001714	-	99	62.577	ENSXMAG00000028804	-	98	62.577	Xiphophorus_maculatus