EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000001833 (Gene tree)
Gene ID: 101171014
Gene Symbol: hnrnpd
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein D0-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 6307 bases
Position: chr12:2822354-2828660
Accession: 101171014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000002284	CBFNT	PF08143.11	7.1e-05	1	1
ENSORLP00000002285	CBFNT	PF08143.11	8.5e-05	1	1
ENSORLP00000002284	RRM_1	PF00076.22	1.9e-34	1	2
ENSORLP00000002284	RRM_1	PF00076.22	1.9e-34	2	2
ENSORLP00000002285	RRM_1	PF00076.22	3.3e-34	1	2
ENSORLP00000002285	RRM_1	PF00076.22	3.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002286	-	1963	XM_004074487	ENSORLP00000002285	314 (aa)	XP_004074535	H2L8V3
ENSORLT00000002285	-	798	-	ENSORLP00000002284	265 (aa)	-	H2L8V2

Gene Model

Click here to download ENSORLG00000001833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000001833	hnrnpd	95	61.921	ENSORLG00000005327	hnrnpaba	90	57.285
ENSORLG00000001833	hnrnpd	75	35.417	ENSORLG00000025015	-	58	35.417
ENSORLG00000001833	hnrnpd	84	32.609	ENSORLG00000030284	-	62	32.812
ENSORLG00000001833	hnrnpd	80	33.880	ENSORLG00000027074	-	81	33.152
ENSORLG00000001833	hnrnpd	98	57.643	ENSORLG00000026044	hnrnpabb	99	57.643
ENSORLG00000001833	hnrnpd	79	38.911	ENSORLG00000029593	MSI1	54	47.619
ENSORLG00000001833	hnrnpd	80	33.721	ENSORLG00000023542	-	58	41.333
ENSORLG00000001833	hnrnpd	81	35.714	ENSORLG00000029240	-	96	35.714
ENSORLG00000001833	hnrnpd	59	34.118	ENSORLG00000010761	slirp	68	34.118
ENSORLG00000001833	hnrnpd	67	39.891	ENSORLG00000008001	-	73	38.430
ENSORLG00000001833	hnrnpd	80	34.637	ENSORLG00000024157	-	63	34.659
ENSORLG00000001833	hnrnpd	69	46.524	ENSORLG00000009671	msi2a	61	46.524
ENSORLG00000001833	hnrnpd	79	34.118	ENSORLG00000026571	-	90	34.118
ENSORLG00000001833	hnrnpd	74	46.988	ENSORLG00000019978	-	57	43.719
ENSORLG00000001833	hnrnpd	70	40.838	ENSORLG00000017561	hnrnpa3	61	41.748
ENSORLG00000001833	hnrnpd	80	35.260	ENSORLG00000023176	-	56	39.080
ENSORLG00000001833	hnrnpd	52	38.750	ENSORLG00000015433	cirbpa	82	36.364
ENSORLG00000001833	hnrnpd	77	32.381	ENSORLG00000005188	tardbpl	57	36.364
ENSORLG00000001833	hnrnpd	75	35.417	ENSORLG00000025332	-	58	35.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001833	hnrnpd	94	84.364	ENSG00000138668	HNRNPD	100	88.288	Homo_sapiens
ENSORLG00000001833	hnrnpd	94	100.000	ENSAPOG00000006184	hnrnpd	100	93.962	Acanthochromis_polyacanthus
ENSORLG00000001833	hnrnpd	94	78.912	ENSAMEG00000005158	HNRNPD	92	78.912	Ailuropoda_melanoleuca
ENSORLG00000001833	hnrnpd	94	90.119	ENSACIG00000008353	hnrnpd	84	88.417	Amphilophus_citrinellus
ENSORLG00000001833	hnrnpd	100	93.962	ENSAOCG00000014191	hnrnpd	100	93.962	Amphiprion_ocellaris
ENSORLG00000001833	hnrnpd	94	100.000	ENSAPEG00000005603	hnrnpd	100	92.114	Amphiprion_percula
ENSORLG00000001833	hnrnpd	94	100.000	ENSATEG00000007097	hnrnpd	100	92.114	Anabas_testudineus
ENSORLG00000001833	hnrnpd	94	82.490	ENSACAG00000010342	HNRNPD	100	82.490	Anolis_carolinensis
ENSORLG00000001833	hnrnpd	88	84.364	ENSANAG00000035221	HNRNPD	82	84.364	Aotus_nancymaae
ENSORLG00000001833	hnrnpd	100	95.652	ENSACLG00000025213	hnrnpd	100	88.328	Astatotilapia_calliptera
ENSORLG00000001833	hnrnpd	94	90.000	ENSACLG00000026497	hnrnpd	100	88.846	Astatotilapia_calliptera
ENSORLG00000001833	hnrnpd	100	81.073	ENSAMXG00000001477	hnrnpd	100	79.180	Astyanax_mexicanus
ENSORLG00000001833	hnrnpd	94	78.912	ENSBTAG00000013952	HNRNPD	83	78.912	Bos_taurus
ENSORLG00000001833	hnrnpd	94	84.364	ENSCJAG00000015165	HNRNPD	82	84.364	Callithrix_jacchus
ENSORLG00000001833	hnrnpd	94	78.912	ENSCAFG00000025045	HNRNPD	83	78.912	Canis_familiaris
ENSORLG00000001833	hnrnpd	94	78.912	ENSCAFG00020010713	HNRNPD	83	78.912	Canis_lupus_dingo
ENSORLG00000001833	hnrnpd	94	84.364	ENSCHIG00000022317	HNRNPD	82	84.364	Capra_hircus
ENSORLG00000001833	hnrnpd	90	83.168	ENSTSYG00000010395	HNRNPD	100	83.168	Carlito_syrichta
ENSORLG00000001833	hnrnpd	94	77.606	ENSCPOG00000040484	HNRNPD	77	77.606	Cavia_porcellus
ENSORLG00000001833	hnrnpd	63	59.596	ENSCCAG00000021563	-	72	64.085	Cebus_capucinus
ENSORLG00000001833	hnrnpd	94	84.364	ENSCCAG00000024528	HNRNPD	82	84.364	Cebus_capucinus
ENSORLG00000001833	hnrnpd	94	84.364	ENSCATG00000039829	HNRNPD	82	84.364	Cercocebus_atys
ENSORLG00000001833	hnrnpd	94	84.364	ENSCLAG00000006540	HNRNPD	92	84.364	Chinchilla_lanigera
ENSORLG00000001833	hnrnpd	94	78.912	ENSCSAG00000004463	HNRNPD	83	78.912	Chlorocebus_sabaeus
ENSORLG00000001833	hnrnpd	94	81.716	ENSCHOG00000000045	HNRNPD	98	81.716	Choloepus_hoffmanni
ENSORLG00000001833	hnrnpd	94	84.444	ENSCPBG00000008025	HNRNPD	86	83.039	Chrysemys_picta_bellii
ENSORLG00000001833	hnrnpd	94	84.727	ENSCANG00000018501	HNRNPD	82	84.727	Colobus_angolensis_palliatus
ENSORLG00000001833	hnrnpd	94	84.727	ENSCGRG00001014634	Hnrnpd	82	84.727	Cricetulus_griseus_chok1gshd
ENSORLG00000001833	hnrnpd	94	82.090	ENSCGRG00000007563	Hnrnpd	96	81.481	Cricetulus_griseus_crigri
ENSORLG00000001833	hnrnpd	100	82.759	ENSCSEG00000010909	hnrnpd	100	81.818	Cynoglossus_semilaevis
ENSORLG00000001833	hnrnpd	100	89.905	ENSCVAG00000019790	hnrnpd	100	92.114	Cyprinodon_variegatus
ENSORLG00000001833	hnrnpd	100	81.191	ENSDARG00000059246	hnrnpd	100	79.560	Danio_rerio
ENSORLG00000001833	hnrnpd	73	71.591	ENSDNOG00000041055	-	69	71.591	Dasypus_novemcinctus
ENSORLG00000001833	hnrnpd	83	71.628	ENSDNOG00000045079	-	72	71.628	Dasypus_novemcinctus
ENSORLG00000001833	hnrnpd	94	82.090	ENSDNOG00000013830	-	76	82.090	Dasypus_novemcinctus
ENSORLG00000001833	hnrnpd	94	84.364	ENSDORG00000012507	Hnrnpd	95	84.364	Dipodomys_ordii
ENSORLG00000001833	hnrnpd	94	79.585	ENSETEG00000016709	HNRNPD	83	79.592	Echinops_telfairi
ENSORLG00000001833	hnrnpd	94	84.364	ENSEASG00005016278	HNRNPD	82	84.364	Equus_asinus_asinus
ENSORLG00000001833	hnrnpd	94	78.912	ENSECAG00000009344	HNRNPD	83	78.912	Equus_caballus
ENSORLG00000001833	hnrnpd	94	69.728	ENSEEUG00000007552	HNRNPD	83	69.728	Erinaceus_europaeus
ENSORLG00000001833	hnrnpd	91	74.597	ENSELUG00000003230	hnrnpd	85	76.378	Esox_lucius
ENSORLG00000001833	hnrnpd	94	84.364	ENSFCAG00000027404	HNRNPD	83	78.912	Felis_catus
ENSORLG00000001833	hnrnpd	94	84.364	ENSFALG00000005716	HNRNPD	89	80.339	Ficedula_albicollis
ENSORLG00000001833	hnrnpd	94	82.463	ENSFDAG00000007958	HNRNPD	81	82.156	Fukomys_damarensis
ENSORLG00000001833	hnrnpd	95	95.455	ENSFHEG00000006838	hnrnpd	100	91.483	Fundulus_heteroclitus
ENSORLG00000001833	hnrnpd	100	76.250	ENSGMOG00000018481	hnrnpd	100	78.750	Gadus_morhua
ENSORLG00000001833	hnrnpd	94	84.436	ENSGALG00000011184	HNRNPD	100	84.436	Gallus_gallus
ENSORLG00000001833	hnrnpd	100	93.208	ENSGAFG00000003714	hnrnpd	100	93.208	Gambusia_affinis
ENSORLG00000001833	hnrnpd	94	90.476	ENSGACG00000015669	hnrnpd	100	83.282	Gasterosteus_aculeatus
ENSORLG00000001833	hnrnpd	86	78.893	ENSGAGG00000003656	HNRNPD	93	74.763	Gopherus_agassizii
ENSORLG00000001833	hnrnpd	94	84.496	ENSGGOG00000026760	HNRNPD	94	84.496	Gorilla_gorilla
ENSORLG00000001833	hnrnpd	100	89.274	ENSHBUG00000011794	hnrnpd	100	88.013	Haplochromis_burtoni
ENSORLG00000001833	hnrnpd	94	84.727	ENSHGLG00000004214	HNRNPD	82	84.727	Heterocephalus_glaber_female
ENSORLG00000001833	hnrnpd	94	84.884	ENSHGLG00100005996	HNRNPD	100	84.825	Heterocephalus_glaber_male
ENSORLG00000001833	hnrnpd	100	83.521	ENSHCOG00000000087	hnrnpd	100	83.521	Hippocampus_comes
ENSORLG00000001833	hnrnpd	98	76.206	ENSIPUG00000024954	hnrnpd	99	79.100	Ictalurus_punctatus
ENSORLG00000001833	hnrnpd	94	84.364	ENSSTOG00000013970	HNRNPD	82	84.364	Ictidomys_tridecemlineatus
ENSORLG00000001833	hnrnpd	94	84.364	ENSJJAG00000023387	Hnrnpd	93	84.364	Jaculus_jaculus
ENSORLG00000001833	hnrnpd	100	89.274	ENSKMAG00000004310	hnrnpd	100	90.221	Kryptolebias_marmoratus
ENSORLG00000001833	hnrnpd	100	89.905	ENSLBEG00000027508	hnrnpd	100	87.382	Labrus_bergylta
ENSORLG00000001833	hnrnpd	95	80.268	ENSLACG00000005306	HNRNPD	94	77.852	Latimeria_chalumnae
ENSORLG00000001833	hnrnpd	100	80.380	ENSLOCG00000010743	hnrnpd	100	72.468	Lepisosteus_oculatus
ENSORLG00000001833	hnrnpd	94	82.090	ENSLAFG00000016483	HNRNPD	98	81.481	Loxodonta_africana
ENSORLG00000001833	hnrnpd	94	84.364	ENSMFAG00000031674	HNRNPD	82	84.364	Macaca_fascicularis
ENSORLG00000001833	hnrnpd	94	84.364	ENSMNEG00000028199	HNRNPD	82	84.364	Macaca_nemestrina
ENSORLG00000001833	hnrnpd	94	84.364	ENSMLEG00000028370	HNRNPD	82	84.364	Mandrillus_leucophaeus
ENSORLG00000001833	hnrnpd	100	89.905	ENSMAMG00000004971	hnrnpd	100	88.644	Mastacembelus_armatus
ENSORLG00000001833	hnrnpd	100	89.274	ENSMZEG00005007558	hnrnpd	100	88.328	Maylandia_zebra
ENSORLG00000001833	hnrnpd	94	84.496	ENSMGAG00000008051	HNRNPD	100	84.496	Meleagris_gallopavo
ENSORLG00000001833	hnrnpd	94	84.727	ENSMAUG00000008830	Hnrnpd	83	84.727	Mesocricetus_auratus
ENSORLG00000001833	hnrnpd	94	84.815	ENSMICG00000010984	HNRNPD	86	84.364	Microcebus_murinus
ENSORLG00000001833	hnrnpd	94	84.727	ENSMOCG00000021398	Hnrnpd	82	84.727	Microtus_ochrogaster
ENSORLG00000001833	hnrnpd	100	84.858	ENSMMOG00000008627	hnrnpd	100	86.435	Mola_mola
ENSORLG00000001833	hnrnpd	92	78.451	ENSMODG00000011898	HNRNPD	79	78.451	Monodelphis_domestica
ENSORLG00000001833	hnrnpd	100	90.536	ENSMALG00000016024	hnrnpd	100	91.167	Monopterus_albus
ENSORLG00000001833	hnrnpd	94	84.727	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	92.000	Mus_caroli
ENSORLG00000001833	hnrnpd	94	84.727	ENSMUSG00000000568	Hnrnpd	100	92.000	Mus_musculus
ENSORLG00000001833	hnrnpd	94	84.727	MGP_PahariEiJ_G0017224	Hnrnpd	100	92.000	Mus_pahari
ENSORLG00000001833	hnrnpd	94	84.727	MGP_SPRETEiJ_G0028443	Hnrnpd	100	92.000	Mus_spretus
ENSORLG00000001833	hnrnpd	94	82.090	ENSMPUG00000014782	HNRNPD	98	82.090	Mustela_putorius_furo
ENSORLG00000001833	hnrnpd	94	73.129	ENSMLUG00000010628	HNRNPD	83	73.129	Myotis_lucifugus
ENSORLG00000001833	hnrnpd	94	84.727	ENSNGAG00000013451	Hnrnpd	83	84.727	Nannospalax_galili
ENSORLG00000001833	hnrnpd	100	89.590	ENSNBRG00000019548	hnrnpd	100	88.328	Neolamprologus_brichardi
ENSORLG00000001833	hnrnpd	94	84.559	ENSNLEG00000008600	HNRNPD	84	84.559	Nomascus_leucogenys
ENSORLG00000001833	hnrnpd	68	82.099	ENSMEUG00000006804	-	58	82.099	Notamacropus_eugenii
ENSORLG00000001833	hnrnpd	94	76.190	ENSOPRG00000009336	HNRNPD	82	74.830	Ochotona_princeps
ENSORLG00000001833	hnrnpd	94	84.364	ENSODEG00000001897	HNRNPD	87	84.364	Octodon_degus
ENSORLG00000001833	hnrnpd	100	89.274	ENSONIG00000015390	hnrnpd	100	88.328	Oreochromis_niloticus
ENSORLG00000001833	hnrnpd	94	84.825	ENSOANG00000001932	HNRNPD	100	84.825	Ornithorhynchus_anatinus
ENSORLG00000001833	hnrnpd	94	82.090	ENSOCUG00000001357	HNRNPD	98	81.481	Oryctolagus_cuniculus
ENSORLG00000001833	hnrnpd	94	98.601	ENSORLG00020014780	hnrnpd	83	98.601	Oryzias_latipes_hni
ENSORLG00000001833	hnrnpd	100	100.000	ENSORLG00015002382	hnrnpd	100	100.000	Oryzias_latipes_hsok
ENSORLG00000001833	hnrnpd	100	96.530	ENSOMEG00000018558	hnrnpd	100	96.530	Oryzias_melastigma
ENSORLG00000001833	hnrnpd	94	78.912	ENSOGAG00000004075	HNRNPD	83	78.912	Otolemur_garnettii
ENSORLG00000001833	hnrnpd	94	82.090	ENSOARG00000000579	HNRNPD	98	82.090	Ovis_aries
ENSORLG00000001833	hnrnpd	90	83.168	ENSPPAG00000035750	HNRNPD	100	83.168	Pan_paniscus
ENSORLG00000001833	hnrnpd	94	84.364	ENSPPRG00000012258	HNRNPD	82	84.364	Panthera_pardus
ENSORLG00000001833	hnrnpd	94	84.364	ENSPTIG00000019434	HNRNPD	96	84.364	Panthera_tigris_altaica
ENSORLG00000001833	hnrnpd	94	84.364	ENSPTRG00000016215	HNRNPD	82	84.364	Pan_troglodytes
ENSORLG00000001833	hnrnpd	94	84.364	ENSPANG00000011785	HNRNPD	82	84.364	Papio_anubis
ENSORLG00000001833	hnrnpd	100	81.509	ENSPKIG00000025512	hnrnpd	100	80.755	Paramormyrops_kingsleyae
ENSORLG00000001833	hnrnpd	79	87.791	ENSPSIG00000017029	HNRNPD	79	87.065	Pelodiscus_sinensis
ENSORLG00000001833	hnrnpd	86	82.456	ENSPMGG00000017169	hnrnpd	86	78.295	Periophthalmus_magnuspinnatus
ENSORLG00000001833	hnrnpd	94	78.596	ENSPEMG00000014804	Hnrnpd	90	78.596	Peromyscus_maniculatus_bairdii
ENSORLG00000001833	hnrnpd	94	83.755	ENSPCIG00000003112	HNRNPD	78	83.755	Phascolarctos_cinereus
ENSORLG00000001833	hnrnpd	95	95.455	ENSPFOG00000002596	hnrnpd	100	91.798	Poecilia_formosa
ENSORLG00000001833	hnrnpd	100	89.590	ENSPLAG00000004297	hnrnpd	100	91.483	Poecilia_latipinna
ENSORLG00000001833	hnrnpd	95	95.455	ENSPMEG00000000152	hnrnpd	100	91.798	Poecilia_mexicana
ENSORLG00000001833	hnrnpd	91	88.506	ENSPREG00000018081	hnrnpd	95	85.441	Poecilia_reticulata
ENSORLG00000001833	hnrnpd	94	78.912	ENSPPYG00000014885	HNRNPD	83	78.912	Pongo_abelii
ENSORLG00000001833	hnrnpd	90	66.242	ENSPPYG00000020411	-	99	66.242	Pongo_abelii
ENSORLG00000001833	hnrnpd	94	77.627	ENSPCAG00000002182	HNRNPD	83	77.627	Procavia_capensis
ENSORLG00000001833	hnrnpd	94	84.364	ENSPCOG00000021331	HNRNPD	82	84.364	Propithecus_coquereli
ENSORLG00000001833	hnrnpd	94	74.150	ENSPVAG00000000003	HNRNPD	83	74.150	Pteropus_vampyrus
ENSORLG00000001833	hnrnpd	100	88.959	ENSPNYG00000004884	hnrnpd	100	84.858	Pundamilia_nyererei
ENSORLG00000001833	hnrnpd	100	77.070	ENSPNAG00000016368	hnrnpd	100	78.981	Pygocentrus_nattereri
ENSORLG00000001833	hnrnpd	94	83.636	ENSRNOG00000002292	Hnrnpd	82	83.636	Rattus_norvegicus
ENSORLG00000001833	hnrnpd	94	84.364	ENSRBIG00000035345	HNRNPD	82	84.364	Rhinopithecus_bieti
ENSORLG00000001833	hnrnpd	94	84.364	ENSRROG00000011888	HNRNPD	82	84.364	Rhinopithecus_roxellana
ENSORLG00000001833	hnrnpd	94	84.364	ENSSBOG00000032881	HNRNPD	82	84.364	Saimiri_boliviensis_boliviensis
ENSORLG00000001833	hnrnpd	94	82.090	ENSSHAG00000013312	HNRNPD	98	82.090	Sarcophilus_harrisii
ENSORLG00000001833	hnrnpd	100	80.757	ENSSFOG00015005913	hnrnpd	100	77.918	Scleropages_formosus
ENSORLG00000001833	hnrnpd	100	85.220	ENSSMAG00000009686	hnrnpd	100	84.277	Scophthalmus_maximus
ENSORLG00000001833	hnrnpd	100	88.328	ENSSDUG00000010792	hnrnpd	100	87.697	Seriola_dumerili
ENSORLG00000001833	hnrnpd	100	81.703	ENSSLDG00000015962	hnrnpd	100	82.650	Seriola_lalandi_dorsalis
ENSORLG00000001833	hnrnpd	94	80.597	ENSSARG00000006883	HNRNPD	98	80.597	Sorex_araneus
ENSORLG00000001833	hnrnpd	94	81.395	ENSSPUG00000013677	HNRNPD	100	80.934	Sphenodon_punctatus
ENSORLG00000001833	hnrnpd	94	100.000	ENSSPAG00000021014	hnrnpd	100	93.585	Stegastes_partitus
ENSORLG00000001833	hnrnpd	88	84.364	ENSSSCG00000009249	HNRNPD	90	77.961	Sus_scrofa
ENSORLG00000001833	hnrnpd	94	78.547	ENSTGUG00000002858	HNRNPD	93	77.049	Taeniopygia_guttata
ENSORLG00000001833	hnrnpd	100	81.905	ENSTRUG00000018450	hnrnpd	100	84.127	Takifugu_rubripes
ENSORLG00000001833	hnrnpd	90	84.232	ENSTNIG00000013499	hnrnpd	100	84.232	Tetraodon_nigroviridis
ENSORLG00000001833	hnrnpd	94	77.239	ENSTBEG00000002327	HNRNPD	98	76.667	Tupaia_belangeri
ENSORLG00000001833	hnrnpd	94	78.912	ENSTTRG00000007592	HNRNPD	83	78.912	Tursiops_truncatus
ENSORLG00000001833	hnrnpd	85	82.090	ENSUAMG00000011374	HNRNPD	73	82.090	Ursus_americanus
ENSORLG00000001833	hnrnpd	94	82.090	ENSUMAG00000008685	HNRNPD	83	82.090	Ursus_maritimus
ENSORLG00000001833	hnrnpd	94	84.496	ENSVPAG00000004374	HNRNPD	100	84.496	Vicugna_pacos
ENSORLG00000001833	hnrnpd	94	78.912	ENSVVUG00000024658	HNRNPD	83	78.912	Vulpes_vulpes
ENSORLG00000001833	hnrnpd	87	79.562	ENSXETG00000012569	hnrnpd	93	77.818	Xenopus_tropicalis
ENSORLG00000001833	hnrnpd	91	90.385	ENSXCOG00000017639	hnrnpd	100	92.308	Xiphophorus_couchianus
ENSORLG00000001833	hnrnpd	95	95.455	ENSXMAG00000019151	hnrnpd	100	91.195	Xiphophorus_maculatus