EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000001836 (Gene tree)
Gene ID: 101171661
Gene Symbol: snupn
Alias: -
Full Name: snurportin 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 15103 bases
Position: chr6:10356317-10371419
Accession: 101171661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000037180	Snurportin1	PF11538.8	1e-16	1	1
ENSORLP00000002287	Snurportin1	PF11538.8	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002288	-	4615	XM_023955636	ENSORLP00000002287	382 (aa)	XP_023811404	H2L8V5
ENSORLT00000033712	-	4752	XM_020703824	ENSORLP00000037180	373 (aa)	XP_020559483	UPI0000E9DBD7

Gene Model

Click here to download ENSORLG00000001836's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000001836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000001836	snupn	94	65.181	ENSG00000169371	SNUPN	100	74.603	Homo_sapiens
ENSORLG00000001836	snupn	100	89.008	ENSAPOG00000016953	snupn	100	89.008	Acanthochromis_polyacanthus
ENSORLG00000001836	snupn	95	65.738	ENSAMEG00000008291	SNUPN	96	65.460	Ailuropoda_melanoleuca
ENSORLG00000001836	snupn	100	86.327	ENSACIG00000012409	snupn	100	86.327	Amphilophus_citrinellus
ENSORLG00000001836	snupn	100	88.472	ENSAOCG00000018096	snupn	100	88.472	Amphiprion_ocellaris
ENSORLG00000001836	snupn	100	88.472	ENSAPEG00000008834	snupn	100	88.472	Amphiprion_percula
ENSORLG00000001836	snupn	100	87.399	ENSATEG00000021019	snupn	100	87.399	Anabas_testudineus
ENSORLG00000001836	snupn	95	65.169	ENSANAG00000025568	SNUPN	96	66.011	Aotus_nancymaae
ENSORLG00000001836	snupn	100	85.791	ENSACLG00000025155	snupn	100	85.791	Astatotilapia_calliptera
ENSORLG00000001836	snupn	99	75.676	ENSAMXG00000038311	snupn	100	74.255	Astyanax_mexicanus
ENSORLG00000001836	snupn	95	65.833	ENSBTAG00000021293	SNUPN	96	65.278	Bos_taurus
ENSORLG00000001836	snupn	82	42.581	WBGene00017746	F23F1.5	88	41.935	Caenorhabditis_elegans
ENSORLG00000001836	snupn	94	65.819	ENSCJAG00000003005	SNUPN	96	65.819	Callithrix_jacchus
ENSORLG00000001836	snupn	95	65.169	ENSCAFG00000018035	SNUPN	96	65.169	Canis_familiaris
ENSORLG00000001836	snupn	95	65.000	ENSCHIG00000018047	SNUPN	96	64.444	Capra_hircus
ENSORLG00000001836	snupn	94	64.045	ENSTSYG00000037224	SNUPN	95	63.483	Carlito_syrichta
ENSORLG00000001836	snupn	94	59.155	ENSCAPG00000005061	SNUPN	95	58.873	Cavia_aperea
ENSORLG00000001836	snupn	94	67.042	ENSCPOG00000034772	SNUPN	95	66.761	Cavia_porcellus
ENSORLG00000001836	snupn	95	65.449	ENSCCAG00000016169	-	96	66.292	Cebus_capucinus
ENSORLG00000001836	snupn	95	64.444	ENSCATG00000039783	SNUPN	96	65.278	Cercocebus_atys
ENSORLG00000001836	snupn	94	65.819	ENSCLAG00000016968	SNUPN	95	66.197	Chinchilla_lanigera
ENSORLG00000001836	snupn	95	63.611	ENSCSAG00000019246	-	96	64.444	Chlorocebus_sabaeus
ENSORLG00000001836	snupn	95	64.444	ENSCSAG00000014576	-	86	65.278	Chlorocebus_sabaeus
ENSORLG00000001836	snupn	95	51.667	ENSCHOG00000005403	SNUPN	96	51.389	Choloepus_hoffmanni
ENSORLG00000001836	snupn	94	66.667	ENSCPBG00000022172	SNUPN	93	65.301	Chrysemys_picta_bellii
ENSORLG00000001836	snupn	95	64.722	ENSCANG00000029707	SNUPN	96	65.556	Colobus_angolensis_palliatus
ENSORLG00000001836	snupn	95	65.556	ENSCGRG00001004622	Snupn	97	66.017	Cricetulus_griseus_chok1gshd
ENSORLG00000001836	snupn	95	65.556	ENSCGRG00000002515	Snupn	97	66.017	Cricetulus_griseus_crigri
ENSORLG00000001836	snupn	100	80.697	ENSCSEG00000003160	snupn	90	80.800	Cynoglossus_semilaevis
ENSORLG00000001836	snupn	100	82.086	ENSCVAG00000010502	snupn	100	81.818	Cyprinodon_variegatus
ENSORLG00000001836	snupn	96	75.698	ENSDARG00000008395	snupn	97	75.070	Danio_rerio
ENSORLG00000001836	snupn	95	63.764	ENSDNOG00000044304	SNUPN	91	63.483	Dasypus_novemcinctus
ENSORLG00000001836	snupn	95	65.278	ENSDORG00000009051	Snupn	96	65.000	Dipodomys_ordii
ENSORLG00000001836	snupn	78	66.116	ENSETEG00000013792	SNUPN	81	66.116	Echinops_telfairi
ENSORLG00000001836	snupn	97	51.872	ENSEBUG00000006682	snupn	96	51.604	Eptatretus_burgeri
ENSORLG00000001836	snupn	95	64.722	ENSEASG00005015697	SNUPN	96	64.499	Equus_asinus_asinus
ENSORLG00000001836	snupn	95	64.444	ENSECAG00000017726	SNUPN	96	65.642	Equus_caballus
ENSORLG00000001836	snupn	66	64.641	ENSEEUG00000000981	-	66	65.193	Erinaceus_europaeus
ENSORLG00000001836	snupn	99	74.805	ENSELUG00000023305	snupn	99	74.805	Esox_lucius
ENSORLG00000001836	snupn	95	65.181	ENSFCAG00000040981	SNUPN	96	64.903	Felis_catus
ENSORLG00000001836	snupn	94	65.922	ENSFDAG00000011599	SNUPN	97	66.106	Fukomys_damarensis
ENSORLG00000001836	snupn	100	83.914	ENSFHEG00000017627	snupn	100	83.914	Fundulus_heteroclitus
ENSORLG00000001836	snupn	94	81.714	ENSGMOG00000009272	snupn	100	82.051	Gadus_morhua
ENSORLG00000001836	snupn	90	62.029	ENSGALG00000029537	SNUPN	95	60.882	Gallus_gallus
ENSORLG00000001836	snupn	100	82.620	ENSGAFG00000004954	snupn	100	81.551	Gambusia_affinis
ENSORLG00000001836	snupn	94	89.143	ENSGACG00000007450	snupn	100	87.429	Gasterosteus_aculeatus
ENSORLG00000001836	snupn	94	65.556	ENSGAGG00000022470	SNUPN	95	65.738	Gopherus_agassizii
ENSORLG00000001836	snupn	54	61.905	ENSGGOG00000004581	-	92	61.905	Gorilla_gorilla
ENSORLG00000001836	snupn	100	86.327	ENSHBUG00000006950	snupn	100	86.327	Haplochromis_burtoni
ENSORLG00000001836	snupn	94	65.915	ENSHGLG00000000536	SNUPN	96	66.197	Heterocephalus_glaber_female
ENSORLG00000001836	snupn	94	65.915	ENSHGLG00100016161	SNUPN	96	66.197	Heterocephalus_glaber_male
ENSORLG00000001836	snupn	99	80.371	ENSHCOG00000007262	snupn	99	81.167	Hippocampus_comes
ENSORLG00000001836	snupn	94	79.202	ENSIPUG00000014460	Snupn	96	77.714	Ictalurus_punctatus
ENSORLG00000001836	snupn	94	64.146	ENSSTOG00000005904	SNUPN	96	64.986	Ictidomys_tridecemlineatus
ENSORLG00000001836	snupn	100	77.748	ENSKMAG00000009957	snupn	100	76.944	Kryptolebias_marmoratus
ENSORLG00000001836	snupn	100	85.185	ENSLBEG00000020694	snupn	100	85.714	Labrus_bergylta
ENSORLG00000001836	snupn	96	64.444	ENSLACG00000015801	SNUPN	96	66.384	Latimeria_chalumnae
ENSORLG00000001836	snupn	95	78.492	ENSLOCG00000015064	snupn	96	77.591	Lepisosteus_oculatus
ENSORLG00000001836	snupn	95	64.722	ENSLAFG00000004422	SNUPN	96	64.444	Loxodonta_africana
ENSORLG00000001836	snupn	77	64.607	ENSMFAG00000003706	SNUPN	95	64.607	Macaca_fascicularis
ENSORLG00000001836	snupn	95	64.722	ENSMMUG00000004784	SNUPN	96	65.556	Macaca_mulatta
ENSORLG00000001836	snupn	95	60.556	ENSMLEG00000041966	SNUPN	96	60.556	Mandrillus_leucophaeus
ENSORLG00000001836	snupn	100	87.131	ENSMAMG00000023109	snupn	100	87.131	Mastacembelus_armatus
ENSORLG00000001836	snupn	100	86.059	ENSMZEG00005010806	snupn	100	86.059	Maylandia_zebra
ENSORLG00000001836	snupn	95	65.556	ENSMAUG00000020426	Snupn	97	66.295	Mesocricetus_auratus
ENSORLG00000001836	snupn	95	64.266	ENSMICG00000016438	SNUPN	96	65.278	Microcebus_murinus
ENSORLG00000001836	snupn	95	66.295	ENSMOCG00000014238	Snupn	97	66.017	Microtus_ochrogaster
ENSORLG00000001836	snupn	100	85.561	ENSMMOG00000001321	snupn	100	86.364	Mola_mola
ENSORLG00000001836	snupn	95	64.754	ENSMODG00000008852	SNUPN	96	64.384	Monodelphis_domestica
ENSORLG00000001836	snupn	100	84.718	ENSMALG00000015058	snupn	100	84.718	Monopterus_albus
ENSORLG00000001836	snupn	94	65.826	MGP_CAROLIEiJ_G0032259	Snupn	96	65.546	Mus_caroli
ENSORLG00000001836	snupn	94	65.642	ENSMUSG00000055334	Snupn	96	65.266	Mus_musculus
ENSORLG00000001836	snupn	95	66.017	MGP_PahariEiJ_G0015126	Snupn	97	65.738	Mus_pahari
ENSORLG00000001836	snupn	94	65.642	MGP_SPRETEiJ_G0033399	Snupn	96	65.266	Mus_spretus
ENSORLG00000001836	snupn	94	65.169	ENSMPUG00000017324	SNUPN	95	64.888	Mustela_putorius_furo
ENSORLG00000001836	snupn	95	59.945	ENSMLUG00000027485	-	96	60.497	Myotis_lucifugus
ENSORLG00000001836	snupn	95	64.187	ENSMLUG00000027517	-	96	64.641	Myotis_lucifugus
ENSORLG00000001836	snupn	94	54.039	ENSMLUG00000000038	-	99	54.469	Myotis_lucifugus
ENSORLG00000001836	snupn	95	64.345	ENSNGAG00000018735	Snupn	96	65.181	Nannospalax_galili
ENSORLG00000001836	snupn	100	86.327	ENSNBRG00000017919	snupn	100	86.327	Neolamprologus_brichardi
ENSORLG00000001836	snupn	63	71.154	ENSNLEG00000035240	-	78	71.154	Nomascus_leucogenys
ENSORLG00000001836	snupn	95	54.167	ENSOPRG00000015889	-	96	54.167	Ochotona_princeps
ENSORLG00000001836	snupn	64	68.182	ENSODEG00000014491	SNUPN	84	68.313	Octodon_degus
ENSORLG00000001836	snupn	97	87.328	ENSONIG00000012855	snupn	99	87.328	Oreochromis_niloticus
ENSORLG00000001836	snupn	95	65.000	ENSOCUG00000008801	SNUPN	96	64.722	Oryctolagus_cuniculus
ENSORLG00000001836	snupn	100	98.660	ENSORLG00020021175	snupn	100	98.660	Oryzias_latipes_hni
ENSORLG00000001836	snupn	100	99.196	ENSORLG00015014444	snupn	100	98.698	Oryzias_latipes_hsok
ENSORLG00000001836	snupn	100	94.102	ENSOMEG00000004853	snupn	100	94.102	Oryzias_melastigma
ENSORLG00000001836	snupn	95	63.435	ENSOGAG00000004915	SNUPN	96	64.266	Otolemur_garnettii
ENSORLG00000001836	snupn	95	65.278	ENSOARG00000001991	SNUPN	95	63.488	Ovis_aries
ENSORLG00000001836	snupn	94	65.460	ENSPPAG00000034351	SNUPN	96	65.642	Pan_paniscus
ENSORLG00000001836	snupn	95	65.181	ENSPPRG00000023192	SNUPN	96	64.903	Panthera_pardus
ENSORLG00000001836	snupn	95	65.181	ENSPTIG00000003528	SNUPN	96	64.903	Panthera_tigris_altaica
ENSORLG00000001836	snupn	94	65.460	ENSPTRG00000007302	SNUPN	96	65.642	Pan_troglodytes
ENSORLG00000001836	snupn	95	56.667	ENSPANG00000034514	SNUPN	96	57.500	Papio_anubis
ENSORLG00000001836	snupn	94	76.571	ENSPKIG00000012444	snupn	95	76.771	Paramormyrops_kingsleyae
ENSORLG00000001836	snupn	94	66.389	ENSPSIG00000015229	SNUPN	95	65.460	Pelodiscus_sinensis
ENSORLG00000001836	snupn	94	78.873	ENSPMGG00000023843	snupn	94	78.873	Periophthalmus_magnuspinnatus
ENSORLG00000001836	snupn	94	64.246	ENSPCIG00000007854	SNUPN	96	64.146	Phascolarctos_cinereus
ENSORLG00000001836	snupn	100	84.450	ENSPFOG00000014221	snupn	99	83.110	Poecilia_formosa
ENSORLG00000001836	snupn	100	84.182	ENSPLAG00000002339	snupn	99	82.842	Poecilia_latipinna
ENSORLG00000001836	snupn	100	83.914	ENSPMEG00000012436	snupn	99	82.574	Poecilia_mexicana
ENSORLG00000001836	snupn	100	83.646	ENSPREG00000012683	snupn	99	82.306	Poecilia_reticulata
ENSORLG00000001836	snupn	94	57.939	ENSPPYG00000006663	SNUPN	95	58.101	Pongo_abelii
ENSORLG00000001836	snupn	94	64.246	ENSPCOG00000025482	SNUPN	96	64.706	Propithecus_coquereli
ENSORLG00000001836	snupn	94	64.607	ENSPVAG00000010035	SNUPN	95	64.146	Pteropus_vampyrus
ENSORLG00000001836	snupn	100	86.327	ENSPNYG00000008752	snupn	100	86.327	Pundamilia_nyererei
ENSORLG00000001836	snupn	94	80.057	ENSPNAG00000026875	snupn	96	78.286	Pygocentrus_nattereri
ENSORLG00000001836	snupn	95	65.833	ENSRNOG00000005426	Snupn	97	65.738	Rattus_norvegicus
ENSORLG00000001836	snupn	95	64.722	ENSRBIG00000038665	SNUPN	96	65.556	Rhinopithecus_bieti
ENSORLG00000001836	snupn	95	64.722	ENSRROG00000043625	SNUPN	96	65.556	Rhinopithecus_roxellana
ENSORLG00000001836	snupn	95	65.730	ENSSBOG00000029086	-	96	66.573	Saimiri_boliviensis_boliviensis
ENSORLG00000001836	snupn	89	79.641	ENSSFOG00015022264	snupn	66	78.378	Scleropages_formosus
ENSORLG00000001836	snupn	99	87.366	ENSSMAG00000005485	snupn	99	87.366	Scophthalmus_maximus
ENSORLG00000001836	snupn	100	88.472	ENSSDUG00000023461	snupn	100	88.472	Seriola_dumerili
ENSORLG00000001836	snupn	100	88.204	ENSSLDG00000001425	snupn	100	86.863	Seriola_lalandi_dorsalis
ENSORLG00000001836	snupn	94	54.469	ENSSARG00000005585	SNUPN	95	55.307	Sorex_araneus
ENSORLG00000001836	snupn	94	64.167	ENSSPUG00000014331	SNUPN	95	65.460	Sphenodon_punctatus
ENSORLG00000001836	snupn	100	88.204	ENSSPAG00000001216	snupn	100	88.204	Stegastes_partitus
ENSORLG00000001836	snupn	95	65.556	ENSSSCG00000001877	SNUPN	96	65.278	Sus_scrofa
ENSORLG00000001836	snupn	100	85.255	ENSTRUG00000016085	snupn	100	84.433	Takifugu_rubripes
ENSORLG00000001836	snupn	93	69.774	ENSTNIG00000008456	snupn	100	70.056	Tetraodon_nigroviridis
ENSORLG00000001836	snupn	95	63.333	ENSTBEG00000002434	SNUPN	96	63.056	Tupaia_belangeri
ENSORLG00000001836	snupn	95	59.167	ENSTTRG00000011484	SNUPN	96	58.889	Tursiops_truncatus
ENSORLG00000001836	snupn	95	65.738	ENSUAMG00000022723	SNUPN	96	65.460	Ursus_americanus
ENSORLG00000001836	snupn	95	66.017	ENSUMAG00000003738	SNUPN	96	65.738	Ursus_maritimus
ENSORLG00000001836	snupn	95	63.585	ENSVVUG00000019574	SNUPN	96	64.045	Vulpes_vulpes
ENSORLG00000001836	snupn	94	66.477	ENSXETG00000015280	snupn	99	66.097	Xenopus_tropicalis
ENSORLG00000001836	snupn	100	83.646	ENSXMAG00000006634	snupn	100	82.306	Xiphophorus_maculatus