EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000002021 (Gene tree)
Gene ID: 101154960
Gene Symbol: skiv2l
Alias: -
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 22508 bases
Position: chr11:5444131-5466638
Accession: 101154960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044359	rRNA_proc-arch	PF13234.6	2.5e-30	1	1
ENSORLP00000002525	rRNA_proc-arch	PF13234.6	2.7e-30	1	1
ENSORLP00000002527	rRNA_proc-arch	PF13234.6	2.7e-30	1	1
ENSORLP00000044359	DEAD	PF00270.29	3.6e-17	1	1
ENSORLP00000002525	DEAD	PF00270.29	3.8e-17	1	1
ENSORLP00000002527	DEAD	PF00270.29	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002526	-	3953	XM_004073761	ENSORLP00000002525	1246 (aa)	XP_004073809	H2L9I2
ENSORLT00000027253	-	3812	-	ENSORLP00000044359	1199 (aa)	-	-
ENSORLT00000002528	-	3642	-	ENSORLP00000002527	1213 (aa)	-	H2L9I4

Gene Model

Click here to download ENSORLG00000002021's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000002021	skiv2l	79	35.396	ENSORLG00000005443	mtrex	91	34.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002021	skiv2l	99	61.365	ENSG00000204351	SKIV2L	99	61.173	Homo_sapiens
ENSORLG00000002021	skiv2l	100	88.122	ENSAPOG00000008257	skiv2l	100	88.122	Acanthochromis_polyacanthus
ENSORLG00000002021	skiv2l	99	61.285	ENSAMEG00000002078	SKIV2L	99	61.313	Ailuropoda_melanoleuca
ENSORLG00000002021	skiv2l	99	86.738	ENSACIG00000016719	skiv2l	99	86.738	Amphilophus_citrinellus
ENSORLG00000002021	skiv2l	100	88.363	ENSAOCG00000017352	skiv2l	100	88.363	Amphiprion_ocellaris
ENSORLG00000002021	skiv2l	100	88.283	ENSAPEG00000001055	skiv2l	100	88.283	Amphiprion_percula
ENSORLG00000002021	skiv2l	100	88.443	ENSATEG00000007601	skiv2l	100	88.443	Anabas_testudineus
ENSORLG00000002021	skiv2l	100	62.949	ENSACAG00000011746	SKIV2L	99	63.700	Anolis_carolinensis
ENSORLG00000002021	skiv2l	99	61.847	ENSANAG00000037992	SKIV2L	99	61.648	Aotus_nancymaae
ENSORLG00000002021	skiv2l	100	88.523	ENSACLG00000006886	skiv2l	100	88.443	Astatotilapia_calliptera
ENSORLG00000002021	skiv2l	100	80.735	ENSAMXG00000011517	skiv2l	100	81.150	Astyanax_mexicanus
ENSORLG00000002021	skiv2l	99	61.779	ENSBTAG00000005587	SKIV2L	99	61.690	Bos_taurus
ENSORLG00000002021	skiv2l	96	41.145	WBGene00008502	skih-2	99	41.355	Caenorhabditis_elegans
ENSORLG00000002021	skiv2l	99	61.606	ENSCJAG00000002263	SKIV2L	99	61.410	Callithrix_jacchus
ENSORLG00000002021	skiv2l	99	61.365	ENSCAFG00000000679	SKIV2L	99	61.392	Canis_familiaris
ENSORLG00000002021	skiv2l	99	61.365	ENSCAFG00020000948	SKIV2L	99	61.392	Canis_lupus_dingo
ENSORLG00000002021	skiv2l	99	61.779	ENSCHIG00000012897	SKIV2L	99	61.769	Capra_hircus
ENSORLG00000002021	skiv2l	99	61.687	ENSTSYG00000012133	SKIV2L	99	61.551	Carlito_syrichta
ENSORLG00000002021	skiv2l	99	61.966	ENSCPOG00000001307	SKIV2L	99	61.893	Cavia_porcellus
ENSORLG00000002021	skiv2l	99	61.767	ENSCCAG00000026206	SKIV2L	99	61.569	Cebus_capucinus
ENSORLG00000002021	skiv2l	99	61.365	ENSCATG00000036901	SKIV2L	99	61.490	Cercocebus_atys
ENSORLG00000002021	skiv2l	99	61.847	ENSCLAG00000007678	SKIV2L	99	61.551	Chinchilla_lanigera
ENSORLG00000002021	skiv2l	99	61.840	ENSCSAG00000008988	SKIV2L	99	61.551	Chlorocebus_sabaeus
ENSORLG00000002021	skiv2l	89	59.611	ENSCPBG00000000343	SKIV2L	99	60.043	Chrysemys_picta_bellii
ENSORLG00000002021	skiv2l	93	51.502	ENSCING00000005576	-	99	51.159	Ciona_intestinalis
ENSORLG00000002021	skiv2l	99	61.526	ENSCANG00000039709	SKIV2L	100	60.921	Colobus_angolensis_palliatus
ENSORLG00000002021	skiv2l	99	61.798	ENSCGRG00001008385	Skiv2l	99	61.587	Cricetulus_griseus_chok1gshd
ENSORLG00000002021	skiv2l	99	85.152	ENSCSEG00000011326	skiv2l	99	85.152	Cynoglossus_semilaevis
ENSORLG00000002021	skiv2l	100	88.221	ENSCVAG00000003072	skiv2l	99	90.061	Cyprinodon_variegatus
ENSORLG00000002021	skiv2l	100	81.934	ENSDARG00000062206	skiv2l	100	81.934	Danio_rerio
ENSORLG00000002021	skiv2l	92	66.278	ENSDNOG00000037590	SKIV2L	93	66.076	Dasypus_novemcinctus
ENSORLG00000002021	skiv2l	93	46.057	FBgn0039117	tst	97	45.805	Drosophila_melanogaster
ENSORLG00000002021	skiv2l	69	74.684	ENSETEG00000009522	SKIV2L	69	74.684	Echinops_telfairi
ENSORLG00000002021	skiv2l	94	55.422	ENSEBUG00000013680	-	98	54.922	Eptatretus_burgeri
ENSORLG00000002021	skiv2l	93	62.489	ENSEASG00005015534	SKIV2L	100	62.872	Equus_asinus_asinus
ENSORLG00000002021	skiv2l	93	61.747	ENSECAG00000021823	SKIV2L	95	62.000	Equus_caballus
ENSORLG00000002021	skiv2l	54	74.704	ENSEEUG00000005049	SKIV2L	57	74.704	Erinaceus_europaeus
ENSORLG00000002021	skiv2l	100	83.200	ENSELUG00000000181	skiv2l	97	87.080	Esox_lucius
ENSORLG00000002021	skiv2l	99	61.606	ENSFCAG00000004519	SKIV2L	99	61.727	Felis_catus
ENSORLG00000002021	skiv2l	99	60.370	ENSFDAG00000009438	SKIV2L	99	60.412	Fukomys_damarensis
ENSORLG00000002021	skiv2l	100	88.381	ENSFHEG00000008853	skiv2l	100	88.381	Fundulus_heteroclitus
ENSORLG00000002021	skiv2l	99	80.386	ENSGMOG00000005926	skiv2l	99	80.386	Gadus_morhua
ENSORLG00000002021	skiv2l	76	56.517	ENSGALG00000035499	SKIV2L	99	56.295	Gallus_gallus
ENSORLG00000002021	skiv2l	100	88.542	ENSGAFG00000002382	skiv2l	100	88.542	Gambusia_affinis
ENSORLG00000002021	skiv2l	100	87.231	ENSGACG00000002927	skiv2l	99	87.231	Gasterosteus_aculeatus
ENSORLG00000002021	skiv2l	50	68.412	ENSGAGG00000015556	SKIV2L	76	70.639	Gopherus_agassizii
ENSORLG00000002021	skiv2l	99	61.526	ENSGGOG00000002270	SKIV2L	99	61.331	Gorilla_gorilla
ENSORLG00000002021	skiv2l	100	88.684	ENSHBUG00000000726	skiv2l	100	88.604	Haplochromis_burtoni
ENSORLG00000002021	skiv2l	99	61.748	ENSHGLG00000016596	SKIV2L	99	61.630	Heterocephalus_glaber_female
ENSORLG00000002021	skiv2l	99	60.144	ENSHGLG00100014161	SKIV2L	99	59.968	Heterocephalus_glaber_male
ENSORLG00000002021	skiv2l	98	80.619	ENSHCOG00000007191	skiv2l	100	80.619	Hippocampus_comes
ENSORLG00000002021	skiv2l	100	80.336	ENSIPUG00000016263	skiv2l	100	80.244	Ictalurus_punctatus
ENSORLG00000002021	skiv2l	100	60.463	ENSSTOG00000014596	SKIV2L	99	61.472	Ictidomys_tridecemlineatus
ENSORLG00000002021	skiv2l	57	62.925	ENSLACG00000002986	-	60	62.925	Latimeria_chalumnae
ENSORLG00000002021	skiv2l	99	61.687	ENSLAFG00000014231	SKIV2L	99	61.472	Loxodonta_africana
ENSORLG00000002021	skiv2l	99	61.606	ENSMFAG00000034235	SKIV2L	99	61.727	Macaca_fascicularis
ENSORLG00000002021	skiv2l	99	61.606	ENSMMUG00000000736	SKIV2L	99	61.569	Macaca_mulatta
ENSORLG00000002021	skiv2l	99	61.606	ENSMNEG00000044474	SKIV2L	99	61.727	Macaca_nemestrina
ENSORLG00000002021	skiv2l	99	61.365	ENSMLEG00000030512	SKIV2L	99	61.490	Mandrillus_leucophaeus
ENSORLG00000002021	skiv2l	100	87.821	ENSMAMG00000002927	skiv2l	100	87.821	Mastacembelus_armatus
ENSORLG00000002021	skiv2l	100	88.604	ENSMZEG00005026415	skiv2l	100	88.523	Maylandia_zebra
ENSORLG00000002021	skiv2l	71	47.009	ENSMGAG00000001320	SKIV2L	96	46.709	Meleagris_gallopavo
ENSORLG00000002021	skiv2l	99	60.849	ENSMAUG00000018613	Skiv2l	99	60.821	Mesocricetus_auratus
ENSORLG00000002021	skiv2l	99	62.008	ENSMICG00000046331	SKIV2L	99	61.965	Microcebus_murinus
ENSORLG00000002021	skiv2l	99	60.385	ENSMOCG00000014240	Skiv2l	99	60.270	Microtus_ochrogaster
ENSORLG00000002021	skiv2l	99	84.016	ENSMMOG00000014547	skiv2l	99	84.016	Mola_mola
ENSORLG00000002021	skiv2l	99	62.074	ENSMODG00000015052	SKIV2L	99	62.006	Monodelphis_domestica
ENSORLG00000002021	skiv2l	99	83.387	ENSMALG00000010535	skiv2l	99	83.387	Monopterus_albus
ENSORLG00000002021	skiv2l	99	62.108	MGP_CAROLIEiJ_G0021477	Skiv2l	99	61.825	Mus_caroli
ENSORLG00000002021	skiv2l	99	61.878	ENSMUSG00000040356	Skiv2l	99	61.746	Mus_musculus
ENSORLG00000002021	skiv2l	99	62.188	MGP_PahariEiJ_G0020472	Skiv2l	99	61.984	Mus_pahari
ENSORLG00000002021	skiv2l	99	61.717	MGP_SPRETEiJ_G0022382	Skiv2l	99	61.587	Mus_spretus
ENSORLG00000002021	skiv2l	99	61.526	ENSMPUG00000010567	SKIV2L	99	61.532	Mustela_putorius_furo
ENSORLG00000002021	skiv2l	99	61.477	ENSMLUG00000000628	SKIV2L	99	61.283	Myotis_lucifugus
ENSORLG00000002021	skiv2l	99	85.105	ENSNBRG00000018650	skiv2l	99	84.863	Neolamprologus_brichardi
ENSORLG00000002021	skiv2l	99	60.936	ENSNLEG00000006451	SKIV2L	100	60.783	Nomascus_leucogenys
ENSORLG00000002021	skiv2l	78	64.286	ENSMEUG00000006072	SKIV2L	78	63.717	Notamacropus_eugenii
ENSORLG00000002021	skiv2l	99	61.058	ENSOPRG00000003972	SKIV2L	99	60.787	Ochotona_princeps
ENSORLG00000002021	skiv2l	99	61.767	ENSODEG00000017516	SKIV2L	99	61.709	Octodon_degus
ENSORLG00000002021	skiv2l	100	88.844	ENSONIG00000013500	skiv2l	100	88.844	Oreochromis_niloticus
ENSORLG00000002021	skiv2l	99	61.606	ENSOCUG00000007019	SKIV2L	99	61.788	Oryctolagus_cuniculus
ENSORLG00000002021	skiv2l	100	99.679	ENSORLG00020009462	skiv2l	100	99.679	Oryzias_latipes_hni
ENSORLG00000002021	skiv2l	100	98.957	ENSORLG00015016750	skiv2l	100	98.957	Oryzias_latipes_hsok
ENSORLG00000002021	skiv2l	100	94.226	ENSOMEG00000008531	skiv2l	100	94.226	Oryzias_melastigma
ENSORLG00000002021	skiv2l	99	61.779	ENSOGAG00000009578	SKIV2L	99	61.569	Otolemur_garnettii
ENSORLG00000002021	skiv2l	99	58.307	ENSOARG00000002411	-	99	58.346	Ovis_aries
ENSORLG00000002021	skiv2l	99	61.102	ENSPPAG00000040211	SKIV2L	100	61.028	Pan_paniscus
ENSORLG00000002021	skiv2l	99	61.767	ENSPPRG00000005017	SKIV2L	99	61.886	Panthera_pardus
ENSORLG00000002021	skiv2l	99	61.365	ENSPTIG00000021656	SKIV2L	99	61.490	Panthera_tigris_altaica
ENSORLG00000002021	skiv2l	99	61.526	ENSPTRG00000017997	SKIV2L	99	61.331	Pan_troglodytes
ENSORLG00000002021	skiv2l	99	60.512	ENSPANG00000011501	SKIV2L	100	60.759	Papio_anubis
ENSORLG00000002021	skiv2l	100	77.963	ENSPKIG00000011876	skiv2l	100	77.963	Paramormyrops_kingsleyae
ENSORLG00000002021	skiv2l	99	84.232	ENSPMGG00000019707	skiv2l	99	84.634	Periophthalmus_magnuspinnatus
ENSORLG00000002021	skiv2l	99	61.384	ENSPEMG00000019001	Skiv2l	99	61.221	Peromyscus_maniculatus_bairdii
ENSORLG00000002021	skiv2l	100	60.717	ENSPCIG00000018792	SKIV2L	99	61.563	Phascolarctos_cinereus
ENSORLG00000002021	skiv2l	100	88.221	ENSPFOG00000002424	skiv2l	100	88.221	Poecilia_formosa
ENSORLG00000002021	skiv2l	100	88.221	ENSPLAG00000018304	skiv2l	100	88.221	Poecilia_latipinna
ENSORLG00000002021	skiv2l	100	88.301	ENSPMEG00000006997	skiv2l	100	88.301	Poecilia_mexicana
ENSORLG00000002021	skiv2l	99	82.669	ENSPREG00000002277	skiv2l	98	86.100	Poecilia_reticulata
ENSORLG00000002021	skiv2l	99	61.205	ENSPPYG00000016472	SKIV2L	99	61.014	Pongo_abelii
ENSORLG00000002021	skiv2l	76	65.049	ENSPCAG00000004178	SKIV2L	77	65.049	Procavia_capensis
ENSORLG00000002021	skiv2l	99	61.767	ENSPCOG00000010308	SKIV2L	99	61.965	Propithecus_coquereli
ENSORLG00000002021	skiv2l	99	61.847	ENSPVAG00000005136	SKIV2L	99	61.648	Pteropus_vampyrus
ENSORLG00000002021	skiv2l	99	82.761	ENSPNYG00000017853	skiv2l	99	88.695	Pundamilia_nyererei
ENSORLG00000002021	skiv2l	99	82.362	ENSPNAG00000011823	skiv2l	100	81.862	Pygocentrus_nattereri
ENSORLG00000002021	skiv2l	99	62.349	ENSRNOG00000000421	Skiv2l	99	62.063	Rattus_norvegicus
ENSORLG00000002021	skiv2l	99	60.335	ENSRBIG00000035485	SKIV2L	99	60.489	Rhinopithecus_bieti
ENSORLG00000002021	skiv2l	99	61.606	ENSRROG00000036429	SKIV2L	99	61.727	Rhinopithecus_roxellana
ENSORLG00000002021	skiv2l	89	47.368	YLR398C	-	85	47.482	Saccharomyces_cerevisiae
ENSORLG00000002021	skiv2l	99	61.928	ENSSBOG00000027920	SKIV2L	99	61.727	Saimiri_boliviensis_boliviensis
ENSORLG00000002021	skiv2l	100	60.383	ENSSHAG00000008963	SKIV2L	99	60.441	Sarcophilus_harrisii
ENSORLG00000002021	skiv2l	100	81.006	ENSSFOG00015016930	skiv2l	100	81.006	Scleropages_formosus
ENSORLG00000002021	skiv2l	100	88.061	ENSSMAG00000020185	skiv2l	100	88.061	Scophthalmus_maximus
ENSORLG00000002021	skiv2l	100	88.292	ENSSDUG00000019977	skiv2l	100	88.292	Seriola_dumerili
ENSORLG00000002021	skiv2l	99	82.060	ENSSLDG00000024382	skiv2l	99	82.060	Seriola_lalandi_dorsalis
ENSORLG00000002021	skiv2l	99	62.184	ENSSPUG00000012945	SKIV2L	99	62.184	Sphenodon_punctatus
ENSORLG00000002021	skiv2l	95	88.409	ENSSPAG00000012904	skiv2l	99	88.409	Stegastes_partitus
ENSORLG00000002021	skiv2l	100	60.703	ENSSSCG00000001424	SKIV2L	100	61.074	Sus_scrofa
ENSORLG00000002021	skiv2l	73	83.957	ENSTRUG00000000966	skiv2l	100	68.879	Takifugu_rubripes
ENSORLG00000002021	skiv2l	100	83.613	ENSTNIG00000004382	skiv2l	99	83.853	Tetraodon_nigroviridis
ENSORLG00000002021	skiv2l	93	63.190	ENSTBEG00000003462	SKIV2L	94	63.190	Tupaia_belangeri
ENSORLG00000002021	skiv2l	99	57.590	ENSTTRG00000005931	SKIV2L	99	57.911	Tursiops_truncatus
ENSORLG00000002021	skiv2l	99	61.526	ENSUAMG00000024336	SKIV2L	99	61.630	Ursus_americanus
ENSORLG00000002021	skiv2l	93	62.148	ENSUMAG00000012666	SKIV2L	100	62.468	Ursus_maritimus
ENSORLG00000002021	skiv2l	99	61.285	ENSVVUG00000022807	SKIV2L	99	61.331	Vulpes_vulpes
ENSORLG00000002021	skiv2l	99	58.833	ENSXETG00000010932	skiv2l	99	58.819	Xenopus_tropicalis
ENSORLG00000002021	skiv2l	99	87.379	ENSXCOG00000019517	skiv2l	97	87.379	Xiphophorus_couchianus
ENSORLG00000002021	skiv2l	100	88.381	ENSXMAG00000014079	skiv2l	100	88.141	Xiphophorus_maculatus