EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000002191 (Gene tree)
Gene ID: 101162339
Gene Symbol: -
Alias: -
Full Name: H/ACA ribonucleoprotein complex non-core subunit NAF1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7004 bases
Position: chr1:6671096-6678099
Accession: 101162339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000002720	Gar1	PF04410.14	2.6e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002721	-	3783	XM_004065653	ENSORLP00000002720	550 (aa)	XP_004065701	H2LA17

Gene Model

Click here to download ENSORLG00000002191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002191's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002191	-	60	45.548	ENSG00000145414	NAF1	95	57.500	Homo_sapiens
ENSORLG00000002191	-	59	60.606	ENSAPOG00000007663	-	71	59.810	Acanthochromis_polyacanthus
ENSORLG00000002191	-	57	62.305	ENSAOCG00000003518	-	72	61.076	Amphiprion_ocellaris
ENSORLG00000002191	-	57	62.617	ENSAPEG00000004453	-	71	62.025	Amphiprion_percula
ENSORLG00000002191	-	56	57.006	ENSATEG00000003514	-	55	59.554	Anabas_testudineus
ENSORLG00000002191	-	59	42.718	ENSANAG00000025253	NAF1	93	57.500	Aotus_nancymaae
ENSORLG00000002191	-	55	58.958	ENSACLG00000017092	-	68	59.032	Astatotilapia_calliptera
ENSORLG00000002191	-	50	41.916	ENSCJAG00000012406	NAF1	95	57.500	Callithrix_jacchus
ENSORLG00000002191	-	50	43.548	ENSTSYG00000005946	NAF1	91	53.846	Carlito_syrichta
ENSORLG00000002191	-	61	44.728	ENSCCAG00000030023	NAF1	95	57.500	Cebus_capucinus
ENSORLG00000002191	-	61	45.333	ENSCATG00000022663	NAF1	95	57.500	Cercocebus_atys
ENSORLG00000002191	-	57	37.360	ENSCLAG00000017209	NAF1	67	37.391	Chinchilla_lanigera
ENSORLG00000002191	-	61	45.333	ENSCANG00000039151	NAF1	95	57.500	Colobus_angolensis_palliatus
ENSORLG00000002191	-	61	43.831	ENSCGRG00000001742	Naf1	60	50.237	Cricetulus_griseus_crigri
ENSORLG00000002191	-	59	53.939	ENSCSEG00000010914	-	61	53.226	Cynoglossus_semilaevis
ENSORLG00000002191	-	60	49.249	ENSCVAG00000003483	-	87	50.000	Cyprinodon_variegatus
ENSORLG00000002191	-	58	40.282	ENSDNOG00000031106	NAF1	66	40.244	Dasypus_novemcinctus
ENSORLG00000002191	-	61	43.226	ENSDORG00000011327	Naf1	58	43.726	Dipodomys_ordii
ENSORLG00000002191	-	61	44.051	ENSFDAG00000007497	NAF1	74	45.804	Fukomys_damarensis
ENSORLG00000002191	-	59	45.106	ENSGALG00000009496	NAF1	52	44.889	Gallus_gallus
ENSORLG00000002191	-	60	54.627	ENSGAFG00000017883	-	58	57.460	Gambusia_affinis
ENSORLG00000002191	-	60	45.548	ENSGGOG00000000894	NAF1	95	57.500	Gorilla_gorilla
ENSORLG00000002191	-	58	51.553	ENSHCOG00000001581	-	72	53.016	Hippocampus_comes
ENSORLG00000002191	-	55	40.836	ENSJJAG00000012147	-	98	45.455	Jaculus_jaculus
ENSORLG00000002191	-	57	57.367	ENSKMAG00000005434	-	73	55.325	Kryptolebias_marmoratus
ENSORLG00000002191	-	58	56.973	ENSLBEG00000020414	-	55	68.085	Labrus_bergylta
ENSORLG00000002191	-	61	45.333	ENSMFAG00000040952	NAF1	95	57.500	Macaca_fascicularis
ENSORLG00000002191	-	61	45.333	ENSMMUG00000001717	NAF1	95	57.500	Macaca_mulatta
ENSORLG00000002191	-	61	45.333	ENSMNEG00000032677	NAF1	95	57.500	Macaca_nemestrina
ENSORLG00000002191	-	55	58.632	ENSMZEG00005005830	-	70	58.710	Maylandia_zebra
ENSORLG00000002191	-	60	40.132	ENSMICG00000038661	NAF1	84	55.556	Microcebus_murinus
ENSORLG00000002191	-	57	38.806	ENSMOCG00000010360	Naf1	54	47.755	Microtus_ochrogaster
ENSORLG00000002191	-	73	55.882	ENSMALG00000018482	-	61	61.783	Monopterus_albus
ENSORLG00000002191	-	59	43.464	ENSNGAG00000023833	Naf1	55	45.200	Nannospalax_galili
ENSORLG00000002191	-	58	40.625	ENSOCUG00000000485	NAF1	53	44.656	Oryctolagus_cuniculus
ENSORLG00000002191	-	100	98.185	ENSORLG00020013478	-	100	98.185	Oryzias_latipes_hni
ENSORLG00000002191	-	99	97.814	ENSORLG00015012985	-	99	97.814	Oryzias_latipes_hsok
ENSORLG00000002191	-	97	71.402	ENSOMEG00000021322	-	97	71.639	Oryzias_melastigma
ENSORLG00000002191	-	60	45.890	ENSPPAG00000034674	NAF1	95	57.500	Pan_paniscus
ENSORLG00000002191	-	60	45.890	ENSPTRG00000016560	NAF1	95	57.500	Pan_troglodytes
ENSORLG00000002191	-	60	43.919	ENSPANG00000015574	NAF1	95	57.500	Papio_anubis
ENSORLG00000002191	-	61	45.349	ENSPSIG00000006545	NAF1	60	47.768	Pelodiscus_sinensis
ENSORLG00000002191	-	61	45.277	ENSPEMG00000014321	Naf1	67	45.736	Peromyscus_maniculatus_bairdii
ENSORLG00000002191	-	61	53.079	ENSPFOG00000010705	-	84	53.870	Poecilia_formosa
ENSORLG00000002191	-	61	53.235	ENSPLAG00000002200	-	75	53.109	Poecilia_latipinna
ENSORLG00000002191	-	61	52.632	ENSPMEG00000004437	-	74	52.196	Poecilia_mexicana
ENSORLG00000002191	-	61	52.493	ENSPREG00000022551	-	69	55.710	Poecilia_reticulata
ENSORLG00000002191	-	55	48.693	ENSPNYG00000021456	-	66	47.742	Pundamilia_nyererei
ENSORLG00000002191	-	60	44.558	ENSRNOG00000026403	Naf1	60	47.541	Rattus_norvegicus
ENSORLG00000002191	-	61	45.667	ENSRROG00000040912	NAF1	95	57.500	Rhinopithecus_roxellana
ENSORLG00000002191	-	60	44.554	ENSSBOG00000002085	NAF1	95	57.500	Saimiri_boliviensis_boliviensis
ENSORLG00000002191	-	56	58.861	ENSSMAG00000015529	-	73	58.104	Scophthalmus_maximus
ENSORLG00000002191	-	53	39.159	ENSSPUG00000004087	NAF1	93	39.117	Sphenodon_punctatus
ENSORLG00000002191	-	58	36.901	ENSSSCG00000008887	NAF1	67	41.566	Sus_scrofa
ENSORLG00000002191	-	61	55.394	ENSXMAG00000011494	-	75	55.270	Xiphophorus_maculatus