EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000002213 (Gene tree)
Gene ID: 101168786
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1A
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 59620 bases
Position: chr8:3999483-4059102
Accession: 101168786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000002754	RRM_1	PF00076.22	4.5e-05	1	1
ENSORLP00000031798	RRM_1	PF00076.22	4.5e-05	1	1
ENSORLP00000032545	RRM_1	PF00076.22	4.5e-05	1	1
ENSORLP00000032925	RRM_1	PF00076.22	4.5e-05	1	1
ENSORLP00000034179	RRM_1	PF00076.22	4.5e-05	1	1
ENSORLP00000035807	RRM_1	PF00076.22	4.5e-05	1	1
ENSORLP00000041034	RRM_1	PF00076.22	4.5e-05	1	1
ENSORLP00000043310	RRM_1	PF00076.22	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000002755	-	6561	-	ENSORLP00000002754	2186 (aa)	-	H2LA50
ENSORLT00000027350	-	6751	-	ENSORLP00000035807	2186 (aa)	-	UPI000CE1B1C1
ENSORLT00000027378	-	8804	XM_023957371	ENSORLP00000031798	2186 (aa)	XP_023813139	UPI000CE1B1C1
ENSORLT00000046584	-	8972	-	ENSORLP00000032545	2186 (aa)	-	UPI000CE1B1C1
ENSORLT00000039550	-	8555	-	ENSORLP00000034179	2186 (aa)	-	UPI000CE1B1C1
ENSORLT00000037370	-	6751	-	ENSORLP00000041034	2186 (aa)	-	UPI000CE1B1C1
ENSORLT00000038338	-	8972	-	ENSORLP00000043310	2186 (aa)	-	UPI000CE1B1C1
ENSORLT00000029144	-	8365	-	ENSORLP00000032925	2186 (aa)	-	UPI000CE1B1C1

Gene Model

Click here to download ENSORLG00000002213's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002213	setd1a	82	94.030	ENSAPOG00000018002	setd1a	78	94.030	Acanthochromis_polyacanthus
ENSORLG00000002213	setd1a	76	89.028	ENSACIG00000007144	setd1a	98	94.118	Amphilophus_citrinellus
ENSORLG00000002213	setd1a	100	81.205	ENSAOCG00000003663	setd1a	100	81.368	Amphiprion_ocellaris
ENSORLG00000002213	setd1a	100	78.623	ENSATEG00000022798	setd1a	100	78.423	Anabas_testudineus
ENSORLG00000002213	setd1a	52	78.641	ENSANAG00000021698	-	52	78.317	Aotus_nancymaae
ENSORLG00000002213	setd1a	100	80.280	ENSACLG00000024747	setd1a	100	79.593	Astatotilapia_calliptera
ENSORLG00000002213	setd1a	58	57.982	ENSAMXG00000009497	setd1a	70	59.179	Astyanax_mexicanus
ENSORLG00000002213	setd1a	62	79.545	ENSCPBG00000010830	-	79	51.168	Chrysemys_picta_bellii
ENSORLG00000002213	setd1a	51	80.068	ENSCANG00000038478	-	51	80.068	Colobus_angolensis_palliatus
ENSORLG00000002213	setd1a	100	74.819	ENSCSEG00000021605	setd1a	100	72.649	Cynoglossus_semilaevis
ENSORLG00000002213	setd1a	100	77.833	ENSCVAG00000011672	setd1a	100	77.335	Cyprinodon_variegatus
ENSORLG00000002213	setd1a	100	69.841	ENSFHEG00000023258	setd1a	99	73.634	Fundulus_heteroclitus
ENSORLG00000002213	setd1a	61	89.905	ENSGAFG00000011698	setd1a	81	90.764	Gambusia_affinis
ENSORLG00000002213	setd1a	80	83.288	ENSGACG00000013688	setd1a	66	84.110	Gasterosteus_aculeatus
ENSORLG00000002213	setd1a	100	80.507	ENSHBUG00000008893	setd1a	100	79.955	Haplochromis_burtoni
ENSORLG00000002213	setd1a	56	85.470	ENSHCOG00000003119	setd1a	73	91.304	Hippocampus_comes
ENSORLG00000002213	setd1a	100	79.295	ENSKMAG00000009484	setd1a	100	79.367	Kryptolebias_marmoratus
ENSORLG00000002213	setd1a	100	75.168	ENSLBEG00000004399	setd1a	69	76.190	Labrus_bergylta
ENSORLG00000002213	setd1a	65	86.246	ENSMAMG00000021851	setd1a	86	86.822	Mastacembelus_armatus
ENSORLG00000002213	setd1a	100	80.814	ENSMZEG00005023141	setd1a	100	79.729	Maylandia_zebra
ENSORLG00000002213	setd1a	71	90.517	ENSMMOG00000016992	setd1a	91	91.279	Mola_mola
ENSORLG00000002213	setd1a	99	71.112	ENSMALG00000007401	setd1a	98	69.210	Monopterus_albus
ENSORLG00000002213	setd1a	74	76.406	ENSNBRG00000004760	setd1a	75	75.305	Neolamprologus_brichardi
ENSORLG00000002213	setd1a	51	80.068	ENSNLEG00000016072	-	51	78.502	Nomascus_leucogenys
ENSORLG00000002213	setd1a	100	99.085	ENSORLG00020011897	setd1a	100	99.085	Oryzias_latipes_hni
ENSORLG00000002213	setd1a	100	99.268	ENSORLG00015004826	setd1a	100	99.268	Oryzias_latipes_hsok
ENSORLG00000002213	setd1a	100	92.557	ENSOMEG00000019732	setd1a	100	92.603	Oryzias_melastigma
ENSORLG00000002213	setd1a	100	74.480	ENSPFOG00000013669	setd1a	100	74.344	Poecilia_formosa
ENSORLG00000002213	setd1a	100	76.550	ENSPLAG00000009294	setd1a	100	75.419	Poecilia_latipinna
ENSORLG00000002213	setd1a	100	76.460	ENSPMEG00000005864	setd1a	100	75.283	Poecilia_mexicana
ENSORLG00000002213	setd1a	100	75.826	ENSPREG00000010201	setd1a	100	75.848	Poecilia_reticulata
ENSORLG00000002213	setd1a	100	80.552	ENSPNYG00000014139	setd1a	100	79.593	Pundamilia_nyererei
ENSORLG00000002213	setd1a	100	78.626	ENSSMAG00000008846	setd1a	100	78.743	Scophthalmus_maximus
ENSORLG00000002213	setd1a	100	80.343	ENSSDUG00000022142	setd1a	100	80.974	Seriola_dumerili
ENSORLG00000002213	setd1a	100	80.478	ENSSLDG00000018250	setd1a	100	81.109	Seriola_lalandi_dorsalis
ENSORLG00000002213	setd1a	100	81.486	ENSSPAG00000007822	setd1a	100	80.487	Stegastes_partitus
ENSORLG00000002213	setd1a	78	81.702	ENSTRUG00000008953	setd1a	99	77.221	Takifugu_rubripes
ENSORLG00000002213	setd1a	78	88.298	ENSTNIG00000014930	setd1a	90	75.645	Tetraodon_nigroviridis
ENSORLG00000002213	setd1a	58	76.971	ENSXCOG00000017585	setd1a	59	75.020	Xiphophorus_couchianus
ENSORLG00000002213	setd1a	100	76.662	ENSXMAG00000008021	setd1a	100	75.531	Xiphophorus_maculatus