EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000002306 (Gene tree)
Gene ID
101170938
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
357809 bases
Position
chr11:5989534-6347342
Accession
101170938
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000002855RRM_1PF00076.222.1e-3112
ENSORLP00000002855RRM_1PF00076.222.1e-3122
ENSORLP00000040484RRM_1PF00076.222.9e-3112
ENSORLP00000040484RRM_1PF00076.222.9e-3122
ENSORLP00000033719RRM_1PF00076.225.5e-3112
ENSORLP00000033719RRM_1PF00076.225.5e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000036463-1842XM_011480740ENSORLP00000033719514 (aa)XP_011479042UPI0005CC536C
ENSORLT00000002856-1038-ENSORLP00000002855345 (aa)-H2LAE7
ENSORLT00000039377-1251XM_023959618ENSORLP00000040484416 (aa)XP_023815386UPI000CE244E3
Gene Model
Click here to download ENSORLG00000002306's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002306's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000002306-5432.632ENSORLG00000002691pabpc1a7032.632
ENSORLG00000002306-5433.333ENSORLG00000003008-5933.333
ENSORLG00000002306-6135.000ENSORLG00000013392si:dkey-205h23.25835.000
ENSORLG00000002306-5136.250ENSORLG00000004600celf5a5436.250
ENSORLG00000002306-5237.158ENSORLG00000000087-7337.158
ENSORLG00000002306-8974.675ENSORLG00000007807rbms2b8772.836
ENSORLG00000002306-5437.879ENSORLG00000004217ELAVL27237.879
ENSORLG00000002306-8681.544ENSORLG00000015426rbms2a9773.740
ENSORLG00000002306-9981.710ENSORLG00000005370RBMS39981.710
ENSORLG00000002306-8671.854ENSORLG00000016818RBMS19065.344
ENSORLG00000002306-5936.250ENSORLG00000008913celf46236.250
ENSORLG00000002306-5034.973ENSORLG00000012435elavl1a5134.973
ENSORLG00000002306-8962.300ENSORLG00000003917rbms1a8862.939
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000002306-9988.095ENSG00000144642RBMS310090.152Homo_sapiens
ENSORLG00000002306-8887.582ENSAPOG00000007266rbms39582.143Acanthochromis_polyacanthus
ENSORLG00000002306-10098.317ENSAPOG00000003432-10098.317Acanthochromis_polyacanthus
ENSORLG00000002306-6391.284ENSAMEG00000005947RBMS39983.828Ailuropoda_melanoleuca
ENSORLG00000002306-9098.077ENSACIG00000006987-8996.319Amphilophus_citrinellus
ENSORLG00000002306-9372.171ENSACIG00000021113RBMS39575.137Amphilophus_citrinellus
ENSORLG00000002306-9982.629ENSAOCG00000021274rbms39982.629Amphiprion_ocellaris
ENSORLG00000002306-10090.805ENSAOCG00000024104-10090.805Amphiprion_ocellaris
ENSORLG00000002306-9283.686ENSAPEG00000016299rbms38986.726Amphiprion_percula
ENSORLG00000002306-10089.904ENSAPEG00000009481-10090.385Amphiprion_percula
ENSORLG00000002306-10098.077ENSATEG00000008433-10098.077Anabas_testudineus
ENSORLG00000002306-9983.255ENSATEG00000024295rbms39983.491Anabas_testudineus
ENSORLG00000002306-9985.648ENSAPLG00000012270RBMS39984.954Anas_platyrhynchos
ENSORLG00000002306-9988.067ENSACAG00000028664RBMS39988.067Anolis_carolinensis
ENSORLG00000002306-9985.450ENSANAG00000021899RBMS39985.450Aotus_nancymaae
ENSORLG00000002306-9982.506ENSACLG00000018506rbms39982.742Astatotilapia_calliptera
ENSORLG00000002306-10088.838ENSACLG00000008976-10086.553Astatotilapia_calliptera
ENSORLG00000002306-6388.479ENSAMXG00000043770-10087.597Astyanax_mexicanus
ENSORLG00000002306-9989.614ENSAMXG00000020388rbms39989.614Astyanax_mexicanus
ENSORLG00000002306-9988.571ENSBTAG00000044062RBMS39988.571Bos_taurus
ENSORLG00000002306-9985.450ENSCJAG00000004312RBMS39985.450Callithrix_jacchus
ENSORLG00000002306-9984.862ENSCAFG00000005464RBMS39984.862Canis_familiaris
ENSORLG00000002306-9984.862ENSCAFG00020024980RBMS39984.862Canis_lupus_dingo
ENSORLG00000002306-9988.095ENSCHIG00000009144RBMS39988.095Capra_hircus
ENSORLG00000002306-7291.532ENSTSYG00000002615RBMS39985.455Carlito_syrichta
ENSORLG00000002306-8883.562ENSCAPG00000017783RBMS39582.842Cavia_aperea
ENSORLG00000002306-9988.434ENSCPOG00000006457RBMS39988.434Cavia_porcellus
ENSORLG00000002306-9985.450ENSCCAG00000008671RBMS39985.450Cebus_capucinus
ENSORLG00000002306-10085.092ENSCATG00000013222RBMS310085.092Cercocebus_atys
ENSORLG00000002306-9987.619ENSCLAG00000005866RBMS39987.619Chinchilla_lanigera
ENSORLG00000002306-6587.407ENSCSAG00000009655RBMS39987.407Chlorocebus_sabaeus
ENSORLG00000002306-8788.000ENSCHOG00000000758RBMS38688.000Choloepus_hoffmanni
ENSORLG00000002306-9988.305ENSCPBG00000022678RBMS39988.305Chrysemys_picta_bellii
ENSORLG00000002306-9985.219ENSCANG00000032137RBMS39985.219Colobus_angolensis_palliatus
ENSORLG00000002306-9986.747ENSCGRG00001007243Rbms39986.747Cricetulus_griseus_chok1gshd
ENSORLG00000002306-9986.747ENSCGRG00000004599Rbms39986.747Cricetulus_griseus_crigri
ENSORLG00000002306-9982.824ENSCSEG00000010011RBMS39983.059Cynoglossus_semilaevis
ENSORLG00000002306-10096.635ENSCSEG00000014677-94100.000Cynoglossus_semilaevis
ENSORLG00000002306-10097.362ENSCVAG00000022814-10097.389Cyprinodon_variegatus
ENSORLG00000002306-9983.810ENSCVAG00000022354rbms39983.810Cyprinodon_variegatus
ENSORLG00000002306-9988.889ENSDARG00000044574rbms310095.139Danio_rerio
ENSORLG00000002306-9987.619ENSDNOG00000016645RBMS39687.619Dasypus_novemcinctus
ENSORLG00000002306-9987.381ENSDORG00000007220Rbms39987.381Dipodomys_ordii
ENSORLG00000002306-8783.333ENSETEG00000009485-8070.286Echinops_telfairi
ENSORLG00000002306-7954.212ENSEBUG00000005830rbms38954.212Eptatretus_burgeri
ENSORLG00000002306-9987.857ENSEASG00005006152RBMS39987.857Equus_asinus_asinus
ENSORLG00000002306-9987.857ENSECAG00000017871RBMS39987.857Equus_caballus
ENSORLG00000002306-8683.502ENSEEUG00000014337RBMS310079.040Erinaceus_europaeus
ENSORLG00000002306-9295.288ENSELUG00000006905-9897.942Esox_lucius
ENSORLG00000002306-9980.142ENSELUG00000002862rbms39980.142Esox_lucius
ENSORLG00000002306-9987.619ENSFCAG00000002130RBMS39987.619Felis_catus
ENSORLG00000002306-9988.544ENSFALG00000009165RBMS39988.544Ficedula_albicollis
ENSORLG00000002306-9987.143ENSFDAG00000008278RBMS39987.143Fukomys_damarensis
ENSORLG00000002306-9079.937ENSFHEG00000004787RBMS39476.294Fundulus_heteroclitus
ENSORLG00000002306-8895.410ENSGMOG00000002600-9688.413Gadus_morhua
ENSORLG00000002306-9988.544ENSGALG00000011439RBMS39988.544Gallus_gallus
ENSORLG00000002306-9984.086ENSGAFG00000000168rbms39984.086Gambusia_affinis
ENSORLG00000002306-10097.602ENSGAFG00000003329-10097.602Gambusia_affinis
ENSORLG00000002306-6587.454ENSGAGG00000004039RBMS39987.454Gopherus_agassizii
ENSORLG00000002306-9985.450ENSGGOG00000007228RBMS39985.450Gorilla_gorilla
ENSORLG00000002306-6290.141ENSHBUG00000021196rbms39485.874Haplochromis_burtoni
ENSORLG00000002306-10097.067ENSHBUG00000019785-9597.067Haplochromis_burtoni
ENSORLG00000002306-9987.619ENSHGLG00000002170RBMS39987.619Heterocephalus_glaber_female
ENSORLG00000002306-9987.619ENSHGLG00100014278RBMS39987.619Heterocephalus_glaber_male
ENSORLG00000002306-10096.403ENSHCOG00000007894-10096.403Hippocampus_comes
ENSORLG00000002306-9989.855ENSIPUG00000017680rbms39989.855Ictalurus_punctatus
ENSORLG00000002306-9988.095ENSSTOG00000006324RBMS39988.095Ictidomys_tridecemlineatus
ENSORLG00000002306-9984.524ENSJJAG00000014708Rbms39984.762Jaculus_jaculus
ENSORLG00000002306-10098.077ENSKMAG00000012586-10098.077Kryptolebias_marmoratus
ENSORLG00000002306-9981.499ENSKMAG00000020500rbms39981.499Kryptolebias_marmoratus
ENSORLG00000002306-6375.862ENSLBEG00000006677rbms39775.758Labrus_bergylta
ENSORLG00000002306-10097.115ENSLBEG00000027388-10097.115Labrus_bergylta
ENSORLG00000002306-9990.431ENSLACG00000010581RBMS39990.431Latimeria_chalumnae
ENSORLG00000002306-6991.349ENSLOCG00000002328rbms39991.349Lepisosteus_oculatus
ENSORLG00000002306-9984.633ENSLAFG00000000354RBMS39984.633Loxodonta_africana
ENSORLG00000002306-9987.857ENSMFAG00000033300RBMS39987.857Macaca_fascicularis
ENSORLG00000002306-9987.857ENSMMUG00000004404RBMS39987.857Macaca_mulatta
ENSORLG00000002306-9985.219ENSMNEG00000035839RBMS39985.219Macaca_nemestrina
ENSORLG00000002306-10085.092ENSMLEG00000029464RBMS310085.092Mandrillus_leucophaeus
ENSORLG00000002306-9983.529ENSMAMG00000024043rbms39984.471Mastacembelus_armatus
ENSORLG00000002306-10097.867ENSMAMG00000002176-9697.867Mastacembelus_armatus
ENSORLG00000002306-10094.614ENSMZEG00005026469-9694.614Maylandia_zebra
ENSORLG00000002306-9982.506ENSMZEG00005006308rbms39982.742Maylandia_zebra
ENSORLG00000002306-9986.747ENSMAUG00000016436Rbms39986.747Mesocricetus_auratus
ENSORLG00000002306-9985.450ENSMICG00000049249RBMS39985.450Microcebus_murinus
ENSORLG00000002306-9986.506ENSMOCG00000006997Rbms39986.506Microtus_ochrogaster
ENSORLG00000002306-10096.635ENSMMOG00000015071-10096.635Mola_mola
ENSORLG00000002306-9085.938ENSMMOG00000008471RBMS38988.146Mola_mola
ENSORLG00000002306-8693.603ENSMODG00000015125RBMS39979.688Monodelphis_domestica
ENSORLG00000002306-10097.356ENSMALG00000009155-10097.356Monopterus_albus
ENSORLG00000002306-9983.059ENSMALG00000019536RBMS39981.132Monopterus_albus
ENSORLG00000002306-9985.783MGP_CAROLIEiJ_G0032783Rbms310090.338Mus_caroli
ENSORLG00000002306-9986.506ENSMUSG00000039607Rbms310091.787Mus_musculus
ENSORLG00000002306-9986.298MGP_PahariEiJ_G0015650Rbms310091.787Mus_pahari
ENSORLG00000002306-9986.506MGP_SPRETEiJ_G0033930Rbms310091.787Mus_spretus
ENSORLG00000002306-9984.862ENSMPUG00000011956RBMS39984.862Mustela_putorius_furo
ENSORLG00000002306-9987.857ENSMLUG00000000659RBMS39987.857Myotis_lucifugus
ENSORLG00000002306-9988.434ENSNGAG00000014039Rbms39988.434Nannospalax_galili
ENSORLG00000002306-10097.115ENSNBRG00000018065-10097.115Neolamprologus_brichardi
ENSORLG00000002306-9985.450ENSNLEG00000004129RBMS39985.450Nomascus_leucogenys
ENSORLG00000002306-9978.261ENSMEUG00000004772RBMS39978.261Notamacropus_eugenii
ENSORLG00000002306-9984.758ENSOPRG00000006808RBMS38584.758Ochotona_princeps
ENSORLG00000002306-9988.095ENSODEG00000003651RBMS39988.095Octodon_degus
ENSORLG00000002306-9977.197ENSONIG00000007172rbms39977.435Oreochromis_niloticus
ENSORLG00000002306-9985.550ENSOANG00000010529RBMS39985.550Ornithorhynchus_anatinus
ENSORLG00000002306-9984.174ENSOCUG00000004840RBMS39984.174Oryctolagus_cuniculus
ENSORLG00000002306-9981.473ENSORLG00020022674RBMS39981.473Oryzias_latipes_hni
ENSORLG00000002306-10099.760ENSORLG00020008496-10099.760Oryzias_latipes_hni
ENSORLG00000002306-10099.760ENSORLG00015015719-10099.760Oryzias_latipes_hsok
ENSORLG00000002306-9981.948ENSORLG00015005509rbms39981.948Oryzias_latipes_hsok
ENSORLG00000002306-10092.857ENSOMEG00000007677-10099.476Oryzias_melastigma
ENSORLG00000002306-9982.423ENSOMEG00000014805RBMS39982.423Oryzias_melastigma
ENSORLG00000002306-9984.404ENSOARG00000014684RBMS39984.404Ovis_aries
ENSORLG00000002306-9985.450ENSPPAG00000036519RBMS39985.450Pan_paniscus
ENSORLG00000002306-9984.758ENSPPRG00000002761RBMS39984.758Panthera_pardus
ENSORLG00000002306-9987.381ENSPTIG00000011568RBMS39987.381Panthera_tigris_altaica
ENSORLG00000002306-9988.095ENSPTRG00000014709RBMS39988.095Pan_troglodytes
ENSORLG00000002306-10085.092ENSPANG00000010234RBMS310085.092Papio_anubis
ENSORLG00000002306-6392.166ENSPKIG00000007989-10092.636Paramormyrops_kingsleyae
ENSORLG00000002306-5093.269ENSPKIG00000016025-8680.632Paramormyrops_kingsleyae
ENSORLG00000002306-9987.828ENSPSIG00000005269RBMS39987.828Pelodiscus_sinensis
ENSORLG00000002306-9297.382ENSPMGG00000021683-10097.382Periophthalmus_magnuspinnatus
ENSORLG00000002306-9184.735ENSPMGG00000021544rbms38686.446Periophthalmus_magnuspinnatus
ENSORLG00000002306-9983.816ENSPEMG00000001117Rbms39983.816Peromyscus_maniculatus_bairdii
ENSORLG00000002306-8791.176ENSPCIG00000006106RBMS38989.720Phascolarctos_cinereus
ENSORLG00000002306-9983.848ENSPFOG00000017887rbms39983.848Poecilia_formosa
ENSORLG00000002306-7387.747ENSPLAG00000016866-8281.931Poecilia_latipinna
ENSORLG00000002306-10097.602ENSPMEG00000002993-10097.602Poecilia_mexicana
ENSORLG00000002306-9795.545ENSPREG00000018221-9797.222Poecilia_reticulata
ENSORLG00000002306-10081.991ENSPREG00000011880rbms310081.991Poecilia_reticulata
ENSORLG00000002306-9971.789ENSPPYG00000014050RBMS38271.789Pongo_abelii
ENSORLG00000002306-9965.596ENSPCAG00000006307RBMS39965.596Procavia_capensis
ENSORLG00000002306-9985.681ENSPCOG00000017136RBMS39985.681Propithecus_coquereli
ENSORLG00000002306-8988.000ENSPVAG00000014037RBMS39975.688Pteropus_vampyrus
ENSORLG00000002306-9982.270ENSPNYG00000010546rbms39982.506Pundamilia_nyererei
ENSORLG00000002306-10097.356ENSPNYG00000012624-10097.356Pundamilia_nyererei
ENSORLG00000002306-5091.908ENSPNAG00000026763-7791.908Pygocentrus_nattereri
ENSORLG00000002306-9989.614ENSPNAG00000001800rbms39989.614Pygocentrus_nattereri
ENSORLG00000002306-9986.747ENSRNOG00000025881Rbms39986.747Rattus_norvegicus
ENSORLG00000002306-9984.988ENSRBIG00000035863RBMS39984.988Rhinopithecus_bieti
ENSORLG00000002306-8692.230ENSRROG00000027512RBMS39485.492Rhinopithecus_roxellana
ENSORLG00000002306-9985.450ENSSBOG00000020232RBMS39985.450Saimiri_boliviensis_boliviensis
ENSORLG00000002306-8692.905ENSSHAG00000002411RBMS38890.221Sarcophilus_harrisii
ENSORLG00000002306-10094.231ENSSFOG00015008578rbms310094.231Scleropages_formosus
ENSORLG00000002306-9979.577ENSSMAG00000004997rbms39983.607Scophthalmus_maximus
ENSORLG00000002306-9793.035ENSSMAG00000020065-9298.529Scophthalmus_maximus
ENSORLG00000002306-10098.317ENSSDUG00000019287-10098.317Seriola_dumerili
ENSORLG00000002306-9983.059ENSSDUG00000013656RBMS39983.294Seriola_dumerili
ENSORLG00000002306-9982.710ENSSLDG00000020276RBMS39982.944Seriola_lalandi_dorsalis
ENSORLG00000002306-10098.317ENSSLDG00000013224-10098.317Seriola_lalandi_dorsalis
ENSORLG00000002306-8677.441ENSSARG00000000695RBMS39473.639Sorex_araneus
ENSORLG00000002306-6986.644ENSSPUG00000017197RBMS39785.522Sphenodon_punctatus
ENSORLG00000002306-10089.885ENSSPAG00000003983-10089.885Stegastes_partitus
ENSORLG00000002306-9982.629ENSSPAG00000020693rbms39982.864Stegastes_partitus
ENSORLG00000002306-9987.619ENSSSCG00000036381RBMS39987.619Sus_scrofa
ENSORLG00000002306-7292.369ENSTGUG00000003572RBMS39984.985Taeniopygia_guttata
ENSORLG00000002306-9980.941ENSTRUG00000021719RBMS39980.941Takifugu_rubripes
ENSORLG00000002306-10085.748ENSTRUG00000007482-10085.919Takifugu_rubripes
ENSORLG00000002306-8692.905ENSTBEG00000005362RBMS39486.533Tupaia_belangeri
ENSORLG00000002306-9984.174ENSTTRG00000006202RBMS39984.174Tursiops_truncatus
ENSORLG00000002306-9984.862ENSUMAG00000000263RBMS39984.862Ursus_maritimus
ENSORLG00000002306-8679.730ENSVPAG00000003842RBMS39475.064Vicugna_pacos
ENSORLG00000002306-8692.905ENSVVUG00000004660RBMS39990.870Vulpes_vulpes
ENSORLG00000002306-6489.189ENSXETG00000032055RBMS39881.107Xenopus_tropicalis
ENSORLG00000002306-9281.748ENSXCOG00000019600-9881.414Xiphophorus_couchianus
ENSORLG00000002306-9982.227ENSXMAG00000021783rbms39982.227Xiphophorus_maculatus
ENSORLG00000002306-10097.842ENSXMAG00000014382-10097.842Xiphophorus_maculatus

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