EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000002356 (Gene tree)
Gene ID: 101155132
Gene Symbol: htatsf1
Alias: -
Full Name: HIV Tat-specific factor 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4205 bases
Position: chr14:8351549-8355753
Accession: 101155132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000002925	RRM_1	PF00076.22	7.3e-17	1	2
ENSORLP00000002925	RRM_1	PF00076.22	7.3e-17	2	2
ENSORLP00000032930	RRM_1	PF00076.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045990	-	1305	-	ENSORLP00000032930	434 (aa)	-	-
ENSORLT00000002926	-	2590	XM_020708727	ENSORLP00000002925	454 (aa)	XP_020564386	H2LAL4

Gene Model

Click here to download ENSORLG00000002356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000002356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000002356	htatsf1	83	63.731	ENSG00000102241	HTATSF1	97	56.356	Homo_sapiens
ENSORLG00000002356	htatsf1	100	77.143	ENSAPOG00000009823	htatsf1	100	76.703	Acanthochromis_polyacanthus
ENSORLG00000002356	htatsf1	100	76.754	ENSACIG00000020459	htatsf1	100	78.509	Amphilophus_citrinellus
ENSORLG00000002356	htatsf1	100	76.190	ENSAOCG00000020994	htatsf1	100	76.190	Amphiprion_ocellaris
ENSORLG00000002356	htatsf1	100	77.342	ENSAPEG00000016432	htatsf1	100	77.124	Amphiprion_percula
ENSORLG00000002356	htatsf1	92	78.606	ENSATEG00000008903	htatsf1	93	78.606	Anabas_testudineus
ENSORLG00000002356	htatsf1	92	62.708	ENSAPLG00000012401	HTATSF1	99	62.708	Anas_platyrhynchos
ENSORLG00000002356	htatsf1	78	64.972	ENSACAG00000009346	HTATSF1	99	59.901	Anolis_carolinensis
ENSORLG00000002356	htatsf1	100	74.891	ENSACLG00000008096	htatsf1	100	76.638	Astatotilapia_calliptera
ENSORLG00000002356	htatsf1	99	67.245	ENSAMXG00000008387	htatsf1	99	67.316	Astyanax_mexicanus
ENSORLG00000002356	htatsf1	84	61.954	ENSBTAG00000032711	HTATSF1	50	61.954	Bos_taurus
ENSORLG00000002356	htatsf1	76	39.601	WBGene00022025	Y65B4A.1	75	38.746	Caenorhabditis_elegans
ENSORLG00000002356	htatsf1	84	64.031	ENSCCAG00000022701	-	50	64.031	Cebus_capucinus
ENSORLG00000002356	htatsf1	84	62.916	ENSCCAG00000025329	-	58	60.145	Cebus_capucinus
ENSORLG00000002356	htatsf1	98	62.914	ENSCPBG00000026092	HTATSF1	98	62.914	Chrysemys_picta_bellii
ENSORLG00000002356	htatsf1	78	45.531	ENSCING00000005914	-	88	45.251	Ciona_intestinalis
ENSORLG00000002356	htatsf1	90	44.125	ENSCSAVG00000000371	-	77	43.081	Ciona_savignyi
ENSORLG00000002356	htatsf1	100	77.093	ENSCVAG00000014070	htatsf1	99	78.634	Cyprinodon_variegatus
ENSORLG00000002356	htatsf1	100	65.152	ENSDARG00000056649	htatsf1	100	65.368	Danio_rerio
ENSORLG00000002356	htatsf1	77	47.175	FBgn0037081	barc	62	48.588	Drosophila_melanogaster
ENSORLG00000002356	htatsf1	88	52.798	ENSEBUG00000001534	htatsf1	82	52.798	Eptatretus_burgeri
ENSORLG00000002356	htatsf1	99	61.422	ENSELUG00000005486	htatsf1	90	62.395	Esox_lucius
ENSORLG00000002356	htatsf1	99	60.349	ENSFALG00000003728	HTATSF1	99	60.349	Ficedula_albicollis
ENSORLG00000002356	htatsf1	100	78.070	ENSFHEG00000020286	htatsf1	100	77.851	Fundulus_heteroclitus
ENSORLG00000002356	htatsf1	80	72.131	ENSGMOG00000016444	htatsf1	100	72.131	Gadus_morhua
ENSORLG00000002356	htatsf1	99	62.445	ENSGALG00000006410	HTATSF1	99	62.445	Gallus_gallus
ENSORLG00000002356	htatsf1	100	76.872	ENSGAFG00000003041	htatsf1	98	76.872	Gambusia_affinis
ENSORLG00000002356	htatsf1	100	76.652	ENSGACG00000020459	htatsf1	100	75.991	Gasterosteus_aculeatus
ENSORLG00000002356	htatsf1	100	74.672	ENSHBUG00000004392	htatsf1	100	76.419	Haplochromis_burtoni
ENSORLG00000002356	htatsf1	99	67.181	ENSHCOG00000009056	htatsf1	99	67.181	Hippocampus_comes
ENSORLG00000002356	htatsf1	99	61.667	ENSIPUG00000017828	htatsf1	99	63.002	Ictalurus_punctatus
ENSORLG00000002356	htatsf1	94	59.268	ENSSTOG00000012505	HTATSF1	50	64.359	Ictidomys_tridecemlineatus
ENSORLG00000002356	htatsf1	100	81.057	ENSKMAG00000007622	htatsf1	100	80.837	Kryptolebias_marmoratus
ENSORLG00000002356	htatsf1	100	75.000	ENSLBEG00000001154	htatsf1	100	74.348	Labrus_bergylta
ENSORLG00000002356	htatsf1	99	59.780	ENSLACG00000015989	HTATSF1	99	59.780	Latimeria_chalumnae
ENSORLG00000002356	htatsf1	99	45.745	ENSLOCG00000015118	htatsf1	99	45.053	Lepisosteus_oculatus
ENSORLG00000002356	htatsf1	84	64.103	ENSLAFG00000014307	HTATSF1	55	61.538	Loxodonta_africana
ENSORLG00000002356	htatsf1	83	63.590	ENSMNEG00000024084	HTATSF1	54	63.077	Macaca_nemestrina
ENSORLG00000002356	htatsf1	99	73.289	ENSMAMG00000021225	htatsf1	99	74.393	Mastacembelus_armatus
ENSORLG00000002356	htatsf1	100	75.109	ENSMZEG00005000485	htatsf1	100	76.856	Maylandia_zebra
ENSORLG00000002356	htatsf1	93	64.019	ENSMGAG00000003558	HTATSF1	97	62.937	Meleagris_gallopavo
ENSORLG00000002356	htatsf1	84	63.239	ENSMICG00000009348	HTATSF1	50	63.239	Microcebus_murinus
ENSORLG00000002356	htatsf1	100	75.330	ENSMMOG00000011013	htatsf1	100	74.449	Mola_mola
ENSORLG00000002356	htatsf1	56	58.555	ENSMODG00000000199	-	91	56.612	Monodelphis_domestica
ENSORLG00000002356	htatsf1	99	60.917	ENSMODG00000014087	-	97	60.691	Monodelphis_domestica
ENSORLG00000002356	htatsf1	100	75.110	ENSMALG00000019977	htatsf1	100	74.890	Monopterus_albus
ENSORLG00000002356	htatsf1	98	50.540	ENSMLUG00000009234	-	51	61.183	Myotis_lucifugus
ENSORLG00000002356	htatsf1	84	64.267	ENSNGAG00000017831	Htatsf1	50	65.026	Nannospalax_galili
ENSORLG00000002356	htatsf1	100	75.328	ENSNBRG00000003818	htatsf1	100	77.074	Neolamprologus_brichardi
ENSORLG00000002356	htatsf1	90	61.538	ENSMEUG00000004133	-	96	61.298	Notamacropus_eugenii
ENSORLG00000002356	htatsf1	100	75.109	ENSONIG00000008638	htatsf1	100	76.638	Oreochromis_niloticus
ENSORLG00000002356	htatsf1	91	59.286	ENSOANG00000011674	-	99	59.286	Ornithorhynchus_anatinus
ENSORLG00000002356	htatsf1	100	98.904	ENSORLG00020017818	htatsf1	97	98.904	Oryzias_latipes_hni
ENSORLG00000002356	htatsf1	100	98.242	ENSORLG00015002268	htatsf1	100	98.242	Oryzias_latipes_hsok
ENSORLG00000002356	htatsf1	100	90.308	ENSOMEG00000007564	htatsf1	100	90.308	Oryzias_melastigma
ENSORLG00000002356	htatsf1	99	65.359	ENSPKIG00000024852	htatsf1	99	65.359	Paramormyrops_kingsleyae
ENSORLG00000002356	htatsf1	75	67.049	ENSPSIG00000010192	HTATSF1	98	67.049	Pelodiscus_sinensis
ENSORLG00000002356	htatsf1	99	69.670	ENSPMGG00000006172	htatsf1	99	69.670	Periophthalmus_magnuspinnatus
ENSORLG00000002356	htatsf1	99	56.987	ENSPCIG00000018896	-	99	56.987	Phascolarctos_cinereus
ENSORLG00000002356	htatsf1	91	61.045	ENSPCIG00000030173	-	93	61.045	Phascolarctos_cinereus
ENSORLG00000002356	htatsf1	100	77.974	ENSPFOG00000007871	htatsf1	97	77.313	Poecilia_formosa
ENSORLG00000002356	htatsf1	100	77.313	ENSPLAG00000007532	htatsf1	100	77.093	Poecilia_latipinna
ENSORLG00000002356	htatsf1	100	78.194	ENSPMEG00000000352	htatsf1	100	77.533	Poecilia_mexicana
ENSORLG00000002356	htatsf1	100	77.533	ENSPREG00000007811	htatsf1	100	77.533	Poecilia_reticulata
ENSORLG00000002356	htatsf1	84	57.326	ENSPCAG00000010576	HTATSF1	52	57.474	Procavia_capensis
ENSORLG00000002356	htatsf1	84	62.564	ENSPVAG00000010281	HTATSF1	54	62.916	Pteropus_vampyrus
ENSORLG00000002356	htatsf1	100	75.328	ENSPNYG00000016693	htatsf1	100	77.074	Pundamilia_nyererei
ENSORLG00000002356	htatsf1	99	65.466	ENSPNAG00000006166	htatsf1	99	65.532	Pygocentrus_nattereri
ENSORLG00000002356	htatsf1	89	60.671	ENSSBOG00000027186	-	50	63.291	Saimiri_boliviensis_boliviensis
ENSORLG00000002356	htatsf1	89	60.891	ENSSBOG00000017914	-	52	61.097	Saimiri_boliviensis_boliviensis
ENSORLG00000002356	htatsf1	83	66.931	ENSSHAG00000006440	-	94	66.931	Sarcophilus_harrisii
ENSORLG00000002356	htatsf1	99	59.483	ENSSHAG00000018908	-	98	59.267	Sarcophilus_harrisii
ENSORLG00000002356	htatsf1	99	62.340	ENSSFOG00015012002	htatsf1	99	62.979	Scleropages_formosus
ENSORLG00000002356	htatsf1	100	73.261	ENSSMAG00000002970	htatsf1	100	73.696	Scophthalmus_maximus
ENSORLG00000002356	htatsf1	100	73.128	ENSSDUG00000020002	htatsf1	99	73.789	Seriola_dumerili
ENSORLG00000002356	htatsf1	100	76.872	ENSSLDG00000016880	htatsf1	100	77.753	Seriola_lalandi_dorsalis
ENSORLG00000002356	htatsf1	87	59.360	ENSSARG00000005193	HTATSF1	51	61.979	Sorex_araneus
ENSORLG00000002356	htatsf1	99	60.000	ENSSPUG00000014767	HTATSF1	98	60.000	Sphenodon_punctatus
ENSORLG00000002356	htatsf1	100	77.778	ENSSPAG00000000732	htatsf1	100	77.560	Stegastes_partitus
ENSORLG00000002356	htatsf1	84	64.524	ENSSSCG00000023062	HTATSF1	54	64.450	Sus_scrofa
ENSORLG00000002356	htatsf1	99	60.870	ENSTGUG00000002099	HTATSF1	99	60.738	Taeniopygia_guttata
ENSORLG00000002356	htatsf1	100	71.806	ENSTRUG00000013383	htatsf1	100	71.930	Takifugu_rubripes
ENSORLG00000002356	htatsf1	100	72.527	ENSTNIG00000016140	htatsf1	99	72.308	Tetraodon_nigroviridis
ENSORLG00000002356	htatsf1	77	62.185	ENSTTRG00000002269	HTATSF1	58	62.185	Tursiops_truncatus
ENSORLG00000002356	htatsf1	99	58.478	ENSXETG00000019749	htatsf1	85	58.065	Xenopus_tropicalis
ENSORLG00000002356	htatsf1	96	76.498	ENSXCOG00000006912	htatsf1	96	77.103	Xiphophorus_couchianus
ENSORLG00000002356	htatsf1	100	77.093	ENSXMAG00000000490	htatsf1	100	77.093	Xiphophorus_maculatus